Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13n-4A0A0G2JG01 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13n-4A0A0G2JG01 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav13n-4A0A0G2JG01 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13n-4A0A0G2JG01 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13n-4A0A0G2JG01 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trav13n-4A0A0G2JG01 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13n-4A0A0G2JG01 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13n-4A0A0G2JG01 Gm27357-201ENSMUST00000183754 135 ntBASIC12.96□□□□□ -0.33
Trav13n-4A0A0G2JG01 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.96□□□□□ -0.33
Trav13n-4A0A0G2JG01 Gm44771-201ENSMUST00000206975 626 ntBASIC12.96□□□□□ -0.33
Trav13n-4A0A0G2JG01 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Trav13n-4A0A0G2JG01 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC12.96□□□□□ -0.33
Trav13n-4A0A0G2JG01 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13n-4A0A0G2JG01 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13n-4A0A0G2JG01 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13n-4A0A0G2JG01 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13n-4A0A0G2JG01 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trav13n-4A0A0G2JG01 Actl10-202ENSMUST00000226583 1501 ntBASIC12.96□□□□□ -0.33
Trav13n-4A0A0G2JG01 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Trav13n-4A0A0G2JG01 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav13n-4A0A0G2JG01 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Trav13n-4A0A0G2JG01 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav13n-4A0A0G2JG01 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13n-4A0A0G2JG01 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13n-4A0A0G2JG01 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13n-4A0A0G2JG01 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13n-4A0A0G2JG01 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13n-4A0A0G2JG01 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13n-4A0A0G2JG01 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav13n-4A0A0G2JG01 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC12.95□□□□□ -0.34
Trav13n-4A0A0G2JG01 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.95□□□□□ -0.34
Trav13n-4A0A0G2JG01 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13n-4A0A0G2JG01 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav13n-4A0A0G2JG01 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.95□□□□□ -0.34
Trav13n-4A0A0G2JG01 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13n-4A0A0G2JG01 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13n-4A0A0G2JG01 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13n-4A0A0G2JG01 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Trav13n-4A0A0G2JG01 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13n-4A0A0G2JG01 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13n-4A0A0G2JG01 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13n-4A0A0G2JG01 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13n-4A0A0G2JG01 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13n-4A0A0G2JG01 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-4A0A0G2JG01 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav13n-4A0A0G2JG01 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-4A0A0G2JG01 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-4A0A0G2JG01 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-4A0A0G2JG01 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-4A0A0G2JG01 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-4A0A0G2JG01 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-4A0A0G2JG01 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-4A0A0G2JG01 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav13n-4A0A0G2JG01 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trav13n-4A0A0G2JG01 Mzt1-203ENSMUST00000227948 952 ntBASIC12.94□□□□□ -0.34
Trav13n-4A0A0G2JG01 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-4A0A0G2JG01 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-4A0A0G2JG01 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.94□□□□□ -0.34
Trav13n-4A0A0G2JG01 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-4A0A0G2JG01 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-4A0A0G2JG01 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-4A0A0G2JG01 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-4A0A0G2JG01 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-4A0A0G2JG01 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-4A0A0G2JG01 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-4A0A0G2JG01 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Trav13n-4A0A0G2JG01 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
Trav13n-4A0A0G2JG01 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-4A0A0G2JG01 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-4A0A0G2JG01 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-4A0A0G2JG01 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-4A0A0G2JG01 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-4A0A0G2JG01 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Trav13n-4A0A0G2JG01 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-4A0A0G2JG01 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-4A0A0G2JG01 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav13n-4A0A0G2JG01 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Trav13n-4A0A0G2JG01 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-4A0A0G2JG01 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-4A0A0G2JG01 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trav13n-4A0A0G2JG01 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-4A0A0G2JG01 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav13n-4A0A0G2JG01 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-4A0A0G2JG01 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-4A0A0G2JG01 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-4A0A0G2JG01 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-4A0A0G2JG01 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-4A0A0G2JG01 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-4A0A0G2JG01 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav13n-4A0A0G2JG01 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-4A0A0G2JG01 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-4A0A0G2JG01 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-4A0A0G2JG01 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-4A0A0G2JG01 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-4A0A0G2JG01 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-4A0A0G2JG01 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-4A0A0G2JG01 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-4A0A0G2JG01 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
Trav13n-4A0A0G2JG01 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms