Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Igkv8-27A0A0G2JF28 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Igkv8-27A0A0G2JF28 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC10.04□□□□□ -0.8
Igkv8-27A0A0G2JF28 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC10.04□□□□□ -0.8
Igkv8-27A0A0G2JF28 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Igkv8-27A0A0G2JF28 Ap3s1-204ENSMUST00000225520 957 ntBASIC10.04□□□□□ -0.8
Igkv8-27A0A0G2JF28 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Igkv8-27A0A0G2JF28 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Igkv8-27A0A0G2JF28 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Igkv8-27A0A0G2JF28 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
Igkv8-27A0A0G2JF28 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Igkv8-27A0A0G2JF28 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Igkv8-27A0A0G2JF28 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Igkv8-27A0A0G2JF28 Wnt10b-206ENSMUST00000228546 2709 ntBASIC10.04□□□□□ -0.8
Igkv8-27A0A0G2JF28 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Igkv8-27A0A0G2JF28 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Igkv8-27A0A0G2JF28 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Igkv8-27A0A0G2JF28 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Igkv8-27A0A0G2JF28 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igkv8-27A0A0G2JF28 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC10.03□□□□□ -0.8
Igkv8-27A0A0G2JF28 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igkv8-27A0A0G2JF28 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igkv8-27A0A0G2JF28 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igkv8-27A0A0G2JF28 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igkv8-27A0A0G2JF28 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igkv8-27A0A0G2JF28 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igkv8-27A0A0G2JF28 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igkv8-27A0A0G2JF28 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igkv8-27A0A0G2JF28 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igkv8-27A0A0G2JF28 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igkv8-27A0A0G2JF28 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igkv8-27A0A0G2JF28 Gm44291-201ENSMUST00000203102 2865 ntBASIC10.03□□□□□ -0.8
Igkv8-27A0A0G2JF28 Gm13034-201ENSMUST00000121342 3177 ntBASIC10.03□□□□□ -0.8
Igkv8-27A0A0G2JF28 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC10.03□□□□□ -0.8
Igkv8-27A0A0G2JF28 Gm27000-201ENSMUST00000182943 842 ntBASIC10.03□□□□□ -0.8
Igkv8-27A0A0G2JF28 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC10.03□□□□□ -0.8
Igkv8-27A0A0G2JF28 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Igkv8-27A0A0G2JF28 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC10.03□□□□□ -0.8
Igkv8-27A0A0G2JF28 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Igkv8-27A0A0G2JF28 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Igkv8-27A0A0G2JF28 Mtag2-201ENSMUST00000058665 714 ntBASIC10.03□□□□□ -0.8
Igkv8-27A0A0G2JF28 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igkv8-27A0A0G2JF28 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Igkv8-27A0A0G2JF28 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
Igkv8-27A0A0G2JF28 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
Igkv8-27A0A0G2JF28 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Igkv8-27A0A0G2JF28 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Igkv8-27A0A0G2JF28 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igkv8-27A0A0G2JF28 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igkv8-27A0A0G2JF28 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Igkv8-27A0A0G2JF28 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Igkv8-27A0A0G2JF28 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Igkv8-27A0A0G2JF28 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Igkv8-27A0A0G2JF28 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Igkv8-27A0A0G2JF28 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC10.02□□□□□ -0.8
Igkv8-27A0A0G2JF28 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Igkv8-27A0A0G2JF28 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Igkv8-27A0A0G2JF28 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Igkv8-27A0A0G2JF28 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Igkv8-27A0A0G2JF28 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Igkv8-27A0A0G2JF28 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Igkv8-27A0A0G2JF28 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Igkv8-27A0A0G2JF28 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Igkv8-27A0A0G2JF28 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Igkv8-27A0A0G2JF28 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Igkv8-27A0A0G2JF28 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Igkv8-27A0A0G2JF28 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Igkv8-27A0A0G2JF28 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Igkv8-27A0A0G2JF28 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC10.02□□□□□ -0.81
Igkv8-27A0A0G2JF28 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC10.02□□□□□ -0.81
Igkv8-27A0A0G2JF28 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Igkv8-27A0A0G2JF28 Gm21956-201ENSMUST00000179946 522 ntBASIC10.02□□□□□ -0.81
Igkv8-27A0A0G2JF28 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC10.02□□□□□ -0.81
Igkv8-27A0A0G2JF28 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Igkv8-27A0A0G2JF28 Gm44549-201ENSMUST00000208351 577 ntBASIC10.02□□□□□ -0.81
Igkv8-27A0A0G2JF28 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC10.02□□□□□ -0.81
Igkv8-27A0A0G2JF28 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Igkv8-27A0A0G2JF28 Gm38058-201ENSMUST00000194323 4368 ntBASIC10.02□□□□□ -0.81
Igkv8-27A0A0G2JF28 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Igkv8-27A0A0G2JF28 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Igkv8-27A0A0G2JF28 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Igkv8-27A0A0G2JF28 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Igkv8-27A0A0G2JF28 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Igkv8-27A0A0G2JF28 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Igkv8-27A0A0G2JF28 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Igkv8-27A0A0G2JF28 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC10.01□□□□□ -0.81
Igkv8-27A0A0G2JF28 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Igkv8-27A0A0G2JF28 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Igkv8-27A0A0G2JF28 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Igkv8-27A0A0G2JF28 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Igkv8-27A0A0G2JF28 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC10.01□□□□□ -0.81
Igkv8-27A0A0G2JF28 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Igkv8-27A0A0G2JF28 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Igkv8-27A0A0G2JF28 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Igkv8-27A0A0G2JF28 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Igkv8-27A0A0G2JF28 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC10.01□□□□□ -0.81
Igkv8-27A0A0G2JF28 Gm11927-201ENSMUST00000118472 759 ntBASIC10.01□□□□□ -0.81
Igkv8-27A0A0G2JF28 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Igkv8-27A0A0G2JF28 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Igkv8-27A0A0G2JF28 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms