Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Trbv30A0A0B4J1P1 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Trbv30A0A0B4J1P1 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trbv30A0A0B4J1P1 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trbv30A0A0B4J1P1 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trbv30A0A0B4J1P1 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trbv30A0A0B4J1P1 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv30A0A0B4J1P1 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv30A0A0B4J1P1 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv30A0A0B4J1P1 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12.02□□□□□ -0.49
Trbv30A0A0B4J1P1 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trbv30A0A0B4J1P1 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.02□□□□□ -0.49
Trbv30A0A0B4J1P1 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv30A0A0B4J1P1 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv30A0A0B4J1P1 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv30A0A0B4J1P1 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv30A0A0B4J1P1 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv30A0A0B4J1P1 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv30A0A0B4J1P1 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv30A0A0B4J1P1 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv30A0A0B4J1P1 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv30A0A0B4J1P1 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv30A0A0B4J1P1 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv30A0A0B4J1P1 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv30A0A0B4J1P1 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv30A0A0B4J1P1 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv30A0A0B4J1P1 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv30A0A0B4J1P1 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv30A0A0B4J1P1 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trbv30A0A0B4J1P1 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv30A0A0B4J1P1 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv30A0A0B4J1P1 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.01□□□□□ -0.49
Trbv30A0A0B4J1P1 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv30A0A0B4J1P1 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv30A0A0B4J1P1 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv30A0A0B4J1P1 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Trbv30A0A0B4J1P1 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv30A0A0B4J1P1 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trbv30A0A0B4J1P1 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trbv30A0A0B4J1P1 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.01□□□□□ -0.49
Trbv30A0A0B4J1P1 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv30A0A0B4J1P1 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.01□□□□□ -0.49
Trbv30A0A0B4J1P1 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.01□□□□□ -0.49
Trbv30A0A0B4J1P1 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv30A0A0B4J1P1 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv30A0A0B4J1P1 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv30A0A0B4J1P1 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv30A0A0B4J1P1 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv30A0A0B4J1P1 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv30A0A0B4J1P1 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv30A0A0B4J1P1 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv30A0A0B4J1P1 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.01□□□□□ -0.49
Trbv30A0A0B4J1P1 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv30A0A0B4J1P1 Gm26917-202ENSMUST00000192833 3329 ntBASIC12.01□□□□□ -0.49
Trbv30A0A0B4J1P1 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv30A0A0B4J1P1 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv30A0A0B4J1P1 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv30A0A0B4J1P1 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv30A0A0B4J1P1 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trbv30A0A0B4J1P1 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trbv30A0A0B4J1P1 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv30A0A0B4J1P1 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv30A0A0B4J1P1 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trbv30A0A0B4J1P1 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv30A0A0B4J1P1 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv30A0A0B4J1P1 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trbv30A0A0B4J1P1 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv30A0A0B4J1P1 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv30A0A0B4J1P1 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv30A0A0B4J1P1 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv30A0A0B4J1P1 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Trbv30A0A0B4J1P1 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC12□□□□□ -0.49
Trbv30A0A0B4J1P1 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trbv30A0A0B4J1P1 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trbv30A0A0B4J1P1 Gm27357-201ENSMUST00000183754 135 ntBASIC12□□□□□ -0.49
Trbv30A0A0B4J1P1 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12□□□□□ -0.49
Trbv30A0A0B4J1P1 AC130671.1-201ENSMUST00000227384 1237 ntBASIC12□□□□□ -0.49
Trbv30A0A0B4J1P1 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv30A0A0B4J1P1 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv30A0A0B4J1P1 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv30A0A0B4J1P1 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv30A0A0B4J1P1 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trbv30A0A0B4J1P1 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv30A0A0B4J1P1 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trbv30A0A0B4J1P1 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv30A0A0B4J1P1 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv30A0A0B4J1P1 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv30A0A0B4J1P1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trbv30A0A0B4J1P1 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv30A0A0B4J1P1 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv30A0A0B4J1P1 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12□□□□□ -0.49
Trbv30A0A0B4J1P1 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv30A0A0B4J1P1 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv30A0A0B4J1P1 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv30A0A0B4J1P1 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv30A0A0B4J1P1 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv30A0A0B4J1P1 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv30A0A0B4J1P1 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12□□□□□ -0.49
Trbv30A0A0B4J1P1 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv30A0A0B4J1P1 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms