Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC12.46□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
Trbv13-3A0A0B4J1H2 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Gm42569-201ENSMUST00000200539 472 ntBASIC12.46□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv13-3A0A0B4J1H2 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.46□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.45□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Gm13148-201ENSMUST00000118892 745 ntBASIC12.45□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC12.45□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC12.45□□□□□ -0.42
Trbv13-3A0A0B4J1H2 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.45□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.45□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.45□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC12.45□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.45□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Gm21596-201ENSMUST00000178049 1316 ntBASIC12.44□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.44□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.44□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trbv13-3A0A0B4J1H2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Gm44672-201ENSMUST00000206944 1098 ntBASIC12.44□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC12.44□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC12.44□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-3A0A0B4J1H2 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv13-3A0A0B4J1H2 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms