Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv3A0A0A6YYE2 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv3A0A0A6YYE2 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv3A0A0A6YYE2 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv3A0A0A6YYE2 Gm13186-201ENSMUST00000118031 316 ntBASIC12.33□□□□□ -0.44
Trbv3A0A0A6YYE2 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.33□□□□□ -0.44
Trbv3A0A0A6YYE2 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv3A0A0A6YYE2 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC12.33□□□□□ -0.44
Trbv3A0A0A6YYE2 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Trbv3A0A0A6YYE2 Gm5874-201ENSMUST00000096101 508 ntBASIC12.33□□□□□ -0.44
Trbv3A0A0A6YYE2 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv3A0A0A6YYE2 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trbv3A0A0A6YYE2 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.33□□□□□ -0.44
Trbv3A0A0A6YYE2 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv3A0A0A6YYE2 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC12.33□□□□□ -0.44
Trbv3A0A0A6YYE2 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv3A0A0A6YYE2 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Trbv3A0A0A6YYE2 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trbv3A0A0A6YYE2 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv3A0A0A6YYE2 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv3A0A0A6YYE2 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv3A0A0A6YYE2 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv3A0A0A6YYE2 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.32□□□□□ -0.44
Trbv3A0A0A6YYE2 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC12.32□□□□□ -0.44
Trbv3A0A0A6YYE2 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv3A0A0A6YYE2 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.32□□□□□ -0.44
Trbv3A0A0A6YYE2 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv3A0A0A6YYE2 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv3A0A0A6YYE2 Zfp264-201ENSMUST00000208656 1563 ntBASIC12.32□□□□□ -0.44
Trbv3A0A0A6YYE2 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv3A0A0A6YYE2 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv3A0A0A6YYE2 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC12.32□□□□□ -0.44
Trbv3A0A0A6YYE2 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv3A0A0A6YYE2 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC12.32□□□□□ -0.44
Trbv3A0A0A6YYE2 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trbv3A0A0A6YYE2 Gm43183-201ENSMUST00000200632 547 ntBASIC12.32□□□□□ -0.44
Trbv3A0A0A6YYE2 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trbv3A0A0A6YYE2 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv3A0A0A6YYE2 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC12.32□□□□□ -0.44
Trbv3A0A0A6YYE2 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trbv3A0A0A6YYE2 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv3A0A0A6YYE2 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv3A0A0A6YYE2 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv3A0A0A6YYE2 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv3A0A0A6YYE2 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv3A0A0A6YYE2 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv3A0A0A6YYE2 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Trbv3A0A0A6YYE2 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv3A0A0A6YYE2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv3A0A0A6YYE2 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv3A0A0A6YYE2 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv3A0A0A6YYE2 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv3A0A0A6YYE2 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trbv3A0A0A6YYE2 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv3A0A0A6YYE2 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv3A0A0A6YYE2 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv3A0A0A6YYE2 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv3A0A0A6YYE2 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv3A0A0A6YYE2 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv3A0A0A6YYE2 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv3A0A0A6YYE2 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv3A0A0A6YYE2 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv3A0A0A6YYE2 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv3A0A0A6YYE2 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv3A0A0A6YYE2 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trbv3A0A0A6YYE2 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv3A0A0A6YYE2 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv3A0A0A6YYE2 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv3A0A0A6YYE2 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trbv3A0A0A6YYE2 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC12.31□□□□□ -0.44
Trbv3A0A0A6YYE2 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC12.31□□□□□ -0.44
Trbv3A0A0A6YYE2 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC12.31□□□□□ -0.44
Trbv3A0A0A6YYE2 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trbv3A0A0A6YYE2 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv3A0A0A6YYE2 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv3A0A0A6YYE2 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv3A0A0A6YYE2 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv3A0A0A6YYE2 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.31□□□□□ -0.44
Trbv3A0A0A6YYE2 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv3A0A0A6YYE2 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv3A0A0A6YYE2 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv3A0A0A6YYE2 AC124581.1-201ENSMUST00000225416 1399 ntBASIC12.3□□□□□ -0.44
Trbv3A0A0A6YYE2 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv3A0A0A6YYE2 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.3□□□□□ -0.44
Trbv3A0A0A6YYE2 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv3A0A0A6YYE2 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv3A0A0A6YYE2 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trbv3A0A0A6YYE2 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv3A0A0A6YYE2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv3A0A0A6YYE2 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trbv3A0A0A6YYE2 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.3□□□□□ -0.44
Trbv3A0A0A6YYE2 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv3A0A0A6YYE2 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv3A0A0A6YYE2 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trbv3A0A0A6YYE2 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv3A0A0A6YYE2 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv3A0A0A6YYE2 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC12.3□□□□□ -0.44
Trbv3A0A0A6YYE2 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC12.3□□□□□ -0.44
Trbv3A0A0A6YYE2 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trbv3A0A0A6YYE2 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms