Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-47A0A0A6YY41 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Ighv1-47A0A0A6YY41 Gm10175-202ENSMUST00000208752 441 ntBASIC13.19□□□□□ -0.3
Ighv1-47A0A0A6YY41 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-47A0A0A6YY41 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-47A0A0A6YY41 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Ighv1-47A0A0A6YY41 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-47A0A0A6YY41 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-47A0A0A6YY41 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-47A0A0A6YY41 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-47A0A0A6YY41 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-47A0A0A6YY41 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ighv1-47A0A0A6YY41 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-47A0A0A6YY41 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.19□□□□□ -0.3
Ighv1-47A0A0A6YY41 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-47A0A0A6YY41 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.19□□□□□ -0.3
Ighv1-47A0A0A6YY41 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-47A0A0A6YY41 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-47A0A0A6YY41 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-47A0A0A6YY41 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-47A0A0A6YY41 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-47A0A0A6YY41 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-47A0A0A6YY41 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.18□□□□□ -0.3
Ighv1-47A0A0A6YY41 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ighv1-47A0A0A6YY41 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-47A0A0A6YY41 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC13.18□□□□□ -0.3
Ighv1-47A0A0A6YY41 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Ighv1-47A0A0A6YY41 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.18□□□□□ -0.3
Ighv1-47A0A0A6YY41 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC13.18□□□□□ -0.3
Ighv1-47A0A0A6YY41 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.18□□□□□ -0.3
Ighv1-47A0A0A6YY41 AC121577.1-201ENSMUST00000227302 707 ntBASIC13.18□□□□□ -0.3
Ighv1-47A0A0A6YY41 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-47A0A0A6YY41 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-47A0A0A6YY41 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-47A0A0A6YY41 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-47A0A0A6YY41 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-47A0A0A6YY41 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-47A0A0A6YY41 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-47A0A0A6YY41 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-47A0A0A6YY41 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-47A0A0A6YY41 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-47A0A0A6YY41 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-47A0A0A6YY41 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-47A0A0A6YY41 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-47A0A0A6YY41 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-47A0A0A6YY41 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-47A0A0A6YY41 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Ighv1-47A0A0A6YY41 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-47A0A0A6YY41 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ighv1-47A0A0A6YY41 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-47A0A0A6YY41 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-47A0A0A6YY41 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-47A0A0A6YY41 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Ighv1-47A0A0A6YY41 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-47A0A0A6YY41 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ighv1-47A0A0A6YY41 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Ighv1-47A0A0A6YY41 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-47A0A0A6YY41 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Ighv1-47A0A0A6YY41 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-47A0A0A6YY41 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-47A0A0A6YY41 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Ighv1-47A0A0A6YY41 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ighv1-47A0A0A6YY41 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-47A0A0A6YY41 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Ighv1-47A0A0A6YY41 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC13.17□□□□□ -0.3
Ighv1-47A0A0A6YY41 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.17□□□□□ -0.3
Ighv1-47A0A0A6YY41 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC13.17□□□□□ -0.3
Ighv1-47A0A0A6YY41 Mir7071-201ENSMUST00000184847 69 ntBASIC13.17□□□□□ -0.3
Ighv1-47A0A0A6YY41 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-47A0A0A6YY41 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-47A0A0A6YY41 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-47A0A0A6YY41 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Ighv1-47A0A0A6YY41 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Ighv1-47A0A0A6YY41 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-47A0A0A6YY41 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-47A0A0A6YY41 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.17□□□□□ -0.3
Ighv1-47A0A0A6YY41 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-47A0A0A6YY41 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-47A0A0A6YY41 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-47A0A0A6YY41 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ighv1-47A0A0A6YY41 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-47A0A0A6YY41 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ighv1-47A0A0A6YY41 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-47A0A0A6YY41 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-47A0A0A6YY41 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ighv1-47A0A0A6YY41 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-47A0A0A6YY41 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
Ighv1-47A0A0A6YY41 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-47A0A0A6YY41 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-47A0A0A6YY41 Gm9013-201ENSMUST00000132939 882 ntBASIC13.16□□□□□ -0.3
Ighv1-47A0A0A6YY41 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.16□□□□□ -0.3
Ighv1-47A0A0A6YY41 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.16□□□□□ -0.3
Ighv1-47A0A0A6YY41 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-47A0A0A6YY41 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-47A0A0A6YY41 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Ighv1-47A0A0A6YY41 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Ighv1-47A0A0A6YY41 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-47A0A0A6YY41 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Ighv1-47A0A0A6YY41 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-47A0A0A6YY41 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms