Protein–RNA interactions for Protein: A0A0A6YWX2

Ighv1-49, Immunoglobulin heavy variable 1-49 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-49A0A0A6YWX2 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC11.37□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ighv1-49A0A0A6YWX2 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC11.36□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC11.36□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC11.36□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Gm44450-201ENSMUST00000199528 114 ntBASIC11.36□□□□□ -0.59
Ighv1-49A0A0A6YWX2 AC122351.1-201ENSMUST00000220467 126 ntBASIC11.36□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Gm38058-201ENSMUST00000194323 4368 ntBASIC11.36□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC11.36□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Gm13559-201ENSMUST00000120476 863 ntBASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Gm26039-201ENSMUST00000158152 144 ntBASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Gm7889-201ENSMUST00000185591 958 ntBASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Gm29994-201ENSMUST00000195495 1193 ntBASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC11.35□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC11.34□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ighv1-49A0A0A6YWX2 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms