Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbc1A0A0A6YWV4 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbc1A0A0A6YWV4 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.66□□□□□ -0.06
Trbc1A0A0A6YWV4 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbc1A0A0A6YWV4 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbc1A0A0A6YWV4 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbc1A0A0A6YWV4 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trbc1A0A0A6YWV4 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trbc1A0A0A6YWV4 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbc1A0A0A6YWV4 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbc1A0A0A6YWV4 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbc1A0A0A6YWV4 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbc1A0A0A6YWV4 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbc1A0A0A6YWV4 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbc1A0A0A6YWV4 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.66□□□□□ -0.06
Trbc1A0A0A6YWV4 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trbc1A0A0A6YWV4 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbc1A0A0A6YWV4 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbc1A0A0A6YWV4 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbc1A0A0A6YWV4 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbc1A0A0A6YWV4 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbc1A0A0A6YWV4 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbc1A0A0A6YWV4 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbc1A0A0A6YWV4 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbc1A0A0A6YWV4 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trbc1A0A0A6YWV4 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbc1A0A0A6YWV4 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trbc1A0A0A6YWV4 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbc1A0A0A6YWV4 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbc1A0A0A6YWV4 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbc1A0A0A6YWV4 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trbc1A0A0A6YWV4 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbc1A0A0A6YWV4 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.65□□□□□ -0.06
Trbc1A0A0A6YWV4 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trbc1A0A0A6YWV4 Gm28033-201ENSMUST00000184224 96 ntBASIC14.65□□□□□ -0.06
Trbc1A0A0A6YWV4 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.65□□□□□ -0.06
Trbc1A0A0A6YWV4 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.65□□□□□ -0.06
Trbc1A0A0A6YWV4 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbc1A0A0A6YWV4 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbc1A0A0A6YWV4 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbc1A0A0A6YWV4 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trbc1A0A0A6YWV4 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbc1A0A0A6YWV4 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbc1A0A0A6YWV4 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbc1A0A0A6YWV4 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trbc1A0A0A6YWV4 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbc1A0A0A6YWV4 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbc1A0A0A6YWV4 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbc1A0A0A6YWV4 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbc1A0A0A6YWV4 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trbc1A0A0A6YWV4 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbc1A0A0A6YWV4 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.64□□□□□ -0.07
Trbc1A0A0A6YWV4 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Trbc1A0A0A6YWV4 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trbc1A0A0A6YWV4 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trbc1A0A0A6YWV4 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.64□□□□□ -0.07
Trbc1A0A0A6YWV4 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbc1A0A0A6YWV4 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.64□□□□□ -0.07
Trbc1A0A0A6YWV4 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.64□□□□□ -0.07
Trbc1A0A0A6YWV4 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbc1A0A0A6YWV4 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.64□□□□□ -0.07
Trbc1A0A0A6YWV4 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.64□□□□□ -0.07
Trbc1A0A0A6YWV4 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.64□□□□□ -0.07
Trbc1A0A0A6YWV4 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbc1A0A0A6YWV4 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Trbc1A0A0A6YWV4 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trbc1A0A0A6YWV4 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbc1A0A0A6YWV4 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbc1A0A0A6YWV4 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbc1A0A0A6YWV4 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trbc1A0A0A6YWV4 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbc1A0A0A6YWV4 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trbc1A0A0A6YWV4 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbc1A0A0A6YWV4 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbc1A0A0A6YWV4 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trbc1A0A0A6YWV4 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbc1A0A0A6YWV4 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbc1A0A0A6YWV4 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbc1A0A0A6YWV4 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbc1A0A0A6YWV4 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbc1A0A0A6YWV4 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbc1A0A0A6YWV4 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trbc1A0A0A6YWV4 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbc1A0A0A6YWV4 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trbc1A0A0A6YWV4 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbc1A0A0A6YWV4 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbc1A0A0A6YWV4 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbc1A0A0A6YWV4 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbc1A0A0A6YWV4 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.63□□□□□ -0.07
Trbc1A0A0A6YWV4 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trbc1A0A0A6YWV4 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Trbc1A0A0A6YWV4 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trbc1A0A0A6YWV4 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbc1A0A0A6YWV4 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.63□□□□□ -0.07
Trbc1A0A0A6YWV4 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.63□□□□□ -0.07
Trbc1A0A0A6YWV4 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trbc1A0A0A6YWV4 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.63□□□□□ -0.07
Trbc1A0A0A6YWV4 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trbc1A0A0A6YWV4 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbc1A0A0A6YWV4 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 125.9 ms