Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-5A0A075B6B5 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-5A0A075B6B5 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-5A0A075B6B5 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-5A0A075B6B5 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-5A0A075B6B5 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-5A0A075B6B5 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-5A0A075B6B5 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav6-5A0A075B6B5 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-5A0A075B6B5 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-5A0A075B6B5 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-5A0A075B6B5 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-5A0A075B6B5 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-5A0A075B6B5 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-5A0A075B6B5 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Trav6-5A0A075B6B5 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-5A0A075B6B5 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav6-5A0A075B6B5 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
Trav6-5A0A075B6B5 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-5A0A075B6B5 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-5A0A075B6B5 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-5A0A075B6B5 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Trav6-5A0A075B6B5 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-5A0A075B6B5 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-5A0A075B6B5 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-5A0A075B6B5 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-5A0A075B6B5 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Trav6-5A0A075B6B5 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-5A0A075B6B5 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav6-5A0A075B6B5 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav6-5A0A075B6B5 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-5A0A075B6B5 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav6-5A0A075B6B5 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-5A0A075B6B5 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-5A0A075B6B5 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-5A0A075B6B5 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-5A0A075B6B5 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-5A0A075B6B5 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-5A0A075B6B5 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-5A0A075B6B5 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-5A0A075B6B5 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-5A0A075B6B5 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-5A0A075B6B5 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav6-5A0A075B6B5 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav6-5A0A075B6B5 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-5A0A075B6B5 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-5A0A075B6B5 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav6-5A0A075B6B5 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC12.37□□□□□ -0.43
Trav6-5A0A075B6B5 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.37□□□□□ -0.43
Trav6-5A0A075B6B5 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav6-5A0A075B6B5 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav6-5A0A075B6B5 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-5A0A075B6B5 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-5A0A075B6B5 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-5A0A075B6B5 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav6-5A0A075B6B5 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-5A0A075B6B5 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-5A0A075B6B5 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav6-5A0A075B6B5 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC12.37□□□□□ -0.43
Trav6-5A0A075B6B5 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-5A0A075B6B5 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-5A0A075B6B5 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-5A0A075B6B5 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-5A0A075B6B5 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav6-5A0A075B6B5 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav6-5A0A075B6B5 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-5A0A075B6B5 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-5A0A075B6B5 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Trav6-5A0A075B6B5 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.37□□□□□ -0.43
Trav6-5A0A075B6B5 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav6-5A0A075B6B5 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.37□□□□□ -0.43
Trav6-5A0A075B6B5 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-5A0A075B6B5 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-5A0A075B6B5 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-5A0A075B6B5 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav6-5A0A075B6B5 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-5A0A075B6B5 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-5A0A075B6B5 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav6-5A0A075B6B5 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-5A0A075B6B5 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-5A0A075B6B5 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-5A0A075B6B5 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-5A0A075B6B5 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-5A0A075B6B5 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-5A0A075B6B5 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-5A0A075B6B5 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-5A0A075B6B5 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-5A0A075B6B5 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-5A0A075B6B5 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-5A0A075B6B5 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC12.36□□□□□ -0.43
Trav6-5A0A075B6B5 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC12.36□□□□□ -0.43
Trav6-5A0A075B6B5 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.36□□□□□ -0.43
Trav6-5A0A075B6B5 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav6-5A0A075B6B5 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-5A0A075B6B5 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-5A0A075B6B5 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav6-5A0A075B6B5 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-5A0A075B6B5 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC12.36□□□□□ -0.43
Trav6-5A0A075B6B5 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-5A0A075B6B5 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms