Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC13.09□□□□□ -0.31
Trav18A0A075B656 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav18A0A075B656 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav18A0A075B656 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav18A0A075B656 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav18A0A075B656 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav18A0A075B656 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav18A0A075B656 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav18A0A075B656 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav18A0A075B656 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav18A0A075B656 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav18A0A075B656 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav18A0A075B656 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav18A0A075B656 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav18A0A075B656 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav18A0A075B656 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav18A0A075B656 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Trav18A0A075B656 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Trav18A0A075B656 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav18A0A075B656 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Trav18A0A075B656 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC13.08□□□□□ -0.32
Trav18A0A075B656 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav18A0A075B656 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav18A0A075B656 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav18A0A075B656 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav18A0A075B656 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav18A0A075B656 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13.08□□□□□ -0.32
Trav18A0A075B656 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav18A0A075B656 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Trav18A0A075B656 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav18A0A075B656 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav18A0A075B656 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav18A0A075B656 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav18A0A075B656 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Trav18A0A075B656 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav18A0A075B656 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav18A0A075B656 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav18A0A075B656 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav18A0A075B656 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Trav18A0A075B656 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav18A0A075B656 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.07□□□□□ -0.32
Trav18A0A075B656 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC13.07□□□□□ -0.32
Trav18A0A075B656 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC13.07□□□□□ -0.32
Trav18A0A075B656 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav18A0A075B656 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav18A0A075B656 Gm37722-201ENSMUST00000193757 208 ntBASIC13.07□□□□□ -0.32
Trav18A0A075B656 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC13.07□□□□□ -0.32
Trav18A0A075B656 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav18A0A075B656 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav18A0A075B656 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav18A0A075B656 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav18A0A075B656 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav18A0A075B656 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav18A0A075B656 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav18A0A075B656 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav18A0A075B656 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Trav18A0A075B656 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav18A0A075B656 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav18A0A075B656 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav18A0A075B656 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav18A0A075B656 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav18A0A075B656 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav18A0A075B656 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav18A0A075B656 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav18A0A075B656 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav18A0A075B656 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav18A0A075B656 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav18A0A075B656 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav18A0A075B656 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Trav18A0A075B656 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav18A0A075B656 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav18A0A075B656 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav18A0A075B656 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav18A0A075B656 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav18A0A075B656 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav18A0A075B656 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav18A0A075B656 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav18A0A075B656 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC13.06□□□□□ -0.32
Trav18A0A075B656 Gm27389-201ENSMUST00000183622 195 ntBASIC13.06□□□□□ -0.32
Trav18A0A075B656 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Trav18A0A075B656 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav18A0A075B656 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav18A0A075B656 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav18A0A075B656 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav18A0A075B656 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav18A0A075B656 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav18A0A075B656 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav18A0A075B656 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav18A0A075B656 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav18A0A075B656 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav18A0A075B656 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav18A0A075B656 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav18A0A075B656 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav18A0A075B656 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Trav18A0A075B656 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav18A0A075B656 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav18A0A075B656 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav18A0A075B656 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Trav18A0A075B656 Gm8668-201ENSMUST00000120559 1447 ntBASIC13.05□□□□□ -0.32
Trav18A0A075B656 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms