Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav17A0A075B655 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav17A0A075B655 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav17A0A075B655 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav17A0A075B655 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.69□□□□□ -0.38
Trav17A0A075B655 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav17A0A075B655 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav17A0A075B655 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav17A0A075B655 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav17A0A075B655 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav17A0A075B655 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav17A0A075B655 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav17A0A075B655 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav17A0A075B655 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
Trav17A0A075B655 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav17A0A075B655 Gm44450-201ENSMUST00000199528 114 ntBASIC12.69□□□□□ -0.38
Trav17A0A075B655 Otx2os1-204ENSMUST00000227221 751 ntBASIC12.69□□□□□ -0.38
Trav17A0A075B655 Odf3b-204ENSMUST00000227834 930 ntBASIC12.69□□□□□ -0.38
Trav17A0A075B655 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trav17A0A075B655 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav17A0A075B655 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav17A0A075B655 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav17A0A075B655 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Trav17A0A075B655 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav17A0A075B655 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav17A0A075B655 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav17A0A075B655 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav17A0A075B655 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav17A0A075B655 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav17A0A075B655 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav17A0A075B655 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav17A0A075B655 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav17A0A075B655 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav17A0A075B655 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav17A0A075B655 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav17A0A075B655 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav17A0A075B655 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav17A0A075B655 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav17A0A075B655 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav17A0A075B655 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav17A0A075B655 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav17A0A075B655 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav17A0A075B655 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav17A0A075B655 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav17A0A075B655 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Trav17A0A075B655 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav17A0A075B655 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav17A0A075B655 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.68□□□□□ -0.38
Trav17A0A075B655 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav17A0A075B655 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav17A0A075B655 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC12.68□□□□□ -0.38
Trav17A0A075B655 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav17A0A075B655 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav17A0A075B655 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav17A0A075B655 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav17A0A075B655 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav17A0A075B655 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav17A0A075B655 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav17A0A075B655 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav17A0A075B655 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav17A0A075B655 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav17A0A075B655 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav17A0A075B655 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav17A0A075B655 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav17A0A075B655 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav17A0A075B655 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav17A0A075B655 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav17A0A075B655 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav17A0A075B655 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav17A0A075B655 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav17A0A075B655 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav17A0A075B655 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav17A0A075B655 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav17A0A075B655 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav17A0A075B655 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Trav17A0A075B655 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav17A0A075B655 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav17A0A075B655 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav17A0A075B655 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav17A0A075B655 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav17A0A075B655 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav17A0A075B655 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav17A0A075B655 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.67□□□□□ -0.38
Trav17A0A075B655 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC12.67□□□□□ -0.38
Trav17A0A075B655 Gm27463-201ENSMUST00000183569 57 ntBASIC12.67□□□□□ -0.38
Trav17A0A075B655 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav17A0A075B655 Gm18421-201ENSMUST00000204122 625 ntBASIC12.67□□□□□ -0.38
Trav17A0A075B655 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav17A0A075B655 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav17A0A075B655 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav17A0A075B655 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav17A0A075B655 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav17A0A075B655 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav17A0A075B655 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav17A0A075B655 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav17A0A075B655 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav17A0A075B655 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.67□□□□□ -0.38
Trav17A0A075B655 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav17A0A075B655 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav17A0A075B655 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms