Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav3-4A0A075B654 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav3-4A0A075B654 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav3-4A0A075B654 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Trav3-4A0A075B654 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav3-4A0A075B654 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.77□□□□□ -0.68
Trav3-4A0A075B654 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Trav3-4A0A075B654 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Trav3-4A0A075B654 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav3-4A0A075B654 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Trav3-4A0A075B654 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-4A0A075B654 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-4A0A075B654 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-4A0A075B654 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-4A0A075B654 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-4A0A075B654 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Trav3-4A0A075B654 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-4A0A075B654 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-4A0A075B654 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-4A0A075B654 AC093043.1-201ENSMUST00000226700 898 ntBASIC10.77□□□□□ -0.69
Trav3-4A0A075B654 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-4A0A075B654 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
Trav3-4A0A075B654 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-4A0A075B654 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-4A0A075B654 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC10.77□□□□□ -0.69
Trav3-4A0A075B654 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-4A0A075B654 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-4A0A075B654 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-4A0A075B654 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-4A0A075B654 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-4A0A075B654 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-4A0A075B654 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-4A0A075B654 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-4A0A075B654 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-4A0A075B654 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-4A0A075B654 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-4A0A075B654 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
Trav3-4A0A075B654 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-4A0A075B654 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-4A0A075B654 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
Trav3-4A0A075B654 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-4A0A075B654 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-4A0A075B654 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-4A0A075B654 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC10.76□□□□□ -0.69
Trav3-4A0A075B654 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-4A0A075B654 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-4A0A075B654 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-4A0A075B654 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC10.76□□□□□ -0.69
Trav3-4A0A075B654 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-4A0A075B654 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-4A0A075B654 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-4A0A075B654 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-4A0A075B654 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-4A0A075B654 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-4A0A075B654 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-4A0A075B654 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-4A0A075B654 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
Trav3-4A0A075B654 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC10.76□□□□□ -0.69
Trav3-4A0A075B654 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-4A0A075B654 Gm9988-201ENSMUST00000069786 435 ntBASIC10.76□□□□□ -0.69
Trav3-4A0A075B654 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-4A0A075B654 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-4A0A075B654 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-4A0A075B654 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Trav3-4A0A075B654 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-4A0A075B654 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-4A0A075B654 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-4A0A075B654 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-4A0A075B654 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-4A0A075B654 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-4A0A075B654 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-4A0A075B654 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-4A0A075B654 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-4A0A075B654 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-4A0A075B654 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-4A0A075B654 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-4A0A075B654 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-4A0A075B654 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-4A0A075B654 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-4A0A075B654 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-4A0A075B654 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-4A0A075B654 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-4A0A075B654 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-4A0A075B654 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-4A0A075B654 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-4A0A075B654 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav3-4A0A075B654 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav3-4A0A075B654 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav3-4A0A075B654 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC10.75□□□□□ -0.69
Trav3-4A0A075B654 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trav3-4A0A075B654 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-4A0A075B654 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-4A0A075B654 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-4A0A075B654 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-4A0A075B654 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-4A0A075B654 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trav3-4A0A075B654 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-4A0A075B654 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-4A0A075B654 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-4A0A075B654 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms