Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16A0A075B653 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16A0A075B653 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC12.36□□□□□ -0.43
Trav16A0A075B653 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav16A0A075B653 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16A0A075B653 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16A0A075B653 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC12.36□□□□□ -0.43
Trav16A0A075B653 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav16A0A075B653 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16A0A075B653 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trav16A0A075B653 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Trav16A0A075B653 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16A0A075B653 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16A0A075B653 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.36□□□□□ -0.43
Trav16A0A075B653 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16A0A075B653 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav16A0A075B653 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16A0A075B653 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav16A0A075B653 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16A0A075B653 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16A0A075B653 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16A0A075B653 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16A0A075B653 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav16A0A075B653 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16A0A075B653 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16A0A075B653 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Trav16A0A075B653 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16A0A075B653 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trav16A0A075B653 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16A0A075B653 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16A0A075B653 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav16A0A075B653 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav16A0A075B653 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Trav16A0A075B653 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16A0A075B653 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Trav16A0A075B653 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav16A0A075B653 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16A0A075B653 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Trav16A0A075B653 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16A0A075B653 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16A0A075B653 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16A0A075B653 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trav16A0A075B653 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16A0A075B653 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav16A0A075B653 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.35□□□□□ -0.43
Trav16A0A075B653 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16A0A075B653 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16A0A075B653 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.35□□□□□ -0.43
Trav16A0A075B653 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav16A0A075B653 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav16A0A075B653 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav16A0A075B653 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16A0A075B653 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16A0A075B653 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16A0A075B653 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16A0A075B653 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav16A0A075B653 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16A0A075B653 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16A0A075B653 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16A0A075B653 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16A0A075B653 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16A0A075B653 Gm6190-201ENSMUST00000220683 1374 ntBASIC12.34□□□□□ -0.43
Trav16A0A075B653 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16A0A075B653 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16A0A075B653 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav16A0A075B653 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav16A0A075B653 Actl10-202ENSMUST00000226583 1501 ntBASIC12.34□□□□□ -0.43
Trav16A0A075B653 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16A0A075B653 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16A0A075B653 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16A0A075B653 Gm12085-201ENSMUST00000119263 940 ntBASIC12.34□□□□□ -0.43
Trav16A0A075B653 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16A0A075B653 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16A0A075B653 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16A0A075B653 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16A0A075B653 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav16A0A075B653 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16A0A075B653 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16A0A075B653 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16A0A075B653 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16A0A075B653 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16A0A075B653 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav16A0A075B653 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16A0A075B653 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav16A0A075B653 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav16A0A075B653 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16A0A075B653 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16A0A075B653 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16A0A075B653 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16A0A075B653 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav16A0A075B653 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav16A0A075B653 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav16A0A075B653 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav16A0A075B653 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Trav16A0A075B653 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trav16A0A075B653 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16A0A075B653 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16A0A075B653 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16A0A075B653 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16A0A075B653 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms