Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-2A0A075B649 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-2A0A075B649 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-2A0A075B649 Gm12441-201ENSMUST00000121806 588 ntBASIC10.75□□□□□ -0.69
Trav13-2A0A075B649 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC10.75□□□□□ -0.69
Trav13-2A0A075B649 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav13-2A0A075B649 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
Trav13-2A0A075B649 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-2A0A075B649 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-2A0A075B649 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-2A0A075B649 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-2A0A075B649 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-2A0A075B649 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Trav13-2A0A075B649 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-2A0A075B649 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-2A0A075B649 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-2A0A075B649 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-2A0A075B649 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-2A0A075B649 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-2A0A075B649 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-2A0A075B649 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-2A0A075B649 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-2A0A075B649 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-2A0A075B649 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-2A0A075B649 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-2A0A075B649 App-207ENSMUST00000227737 2827 ntBASIC10.75□□□□□ -0.69
Trav13-2A0A075B649 AC153526.5-201ENSMUST00000218661 2147 ntBASIC10.75□□□□□ -0.69
Trav13-2A0A075B649 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13-2A0A075B649 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13-2A0A075B649 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Trav13-2A0A075B649 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13-2A0A075B649 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Trav13-2A0A075B649 Gm7712-202ENSMUST00000222331 1510 ntBASIC10.74□□□□□ -0.69
Trav13-2A0A075B649 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
Trav13-2A0A075B649 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
Trav13-2A0A075B649 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Trav13-2A0A075B649 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13-2A0A075B649 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13-2A0A075B649 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Trav13-2A0A075B649 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13-2A0A075B649 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Trav13-2A0A075B649 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC10.74□□□□□ -0.69
Trav13-2A0A075B649 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav13-2A0A075B649 Gm38027-201ENSMUST00000192315 235 ntBASIC10.74□□□□□ -0.69
Trav13-2A0A075B649 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13-2A0A075B649 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Trav13-2A0A075B649 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13-2A0A075B649 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13-2A0A075B649 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13-2A0A075B649 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13-2A0A075B649 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13-2A0A075B649 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13-2A0A075B649 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13-2A0A075B649 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13-2A0A075B649 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13-2A0A075B649 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC10.74□□□□□ -0.69
Trav13-2A0A075B649 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13-2A0A075B649 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13-2A0A075B649 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13-2A0A075B649 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13-2A0A075B649 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13-2A0A075B649 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13-2A0A075B649 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Trav13-2A0A075B649 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13-2A0A075B649 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13-2A0A075B649 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13-2A0A075B649 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13-2A0A075B649 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13-2A0A075B649 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13-2A0A075B649 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13-2A0A075B649 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav13-2A0A075B649 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Trav13-2A0A075B649 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13-2A0A075B649 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Trav13-2A0A075B649 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13-2A0A075B649 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13-2A0A075B649 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13-2A0A075B649 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13-2A0A075B649 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Trav13-2A0A075B649 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13-2A0A075B649 Gm44878-201ENSMUST00000205812 1295 ntBASIC10.73□□□□□ -0.69
Trav13-2A0A075B649 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13-2A0A075B649 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13-2A0A075B649 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13-2A0A075B649 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav13-2A0A075B649 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13-2A0A075B649 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13-2A0A075B649 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13-2A0A075B649 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Trav13-2A0A075B649 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13-2A0A075B649 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13-2A0A075B649 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13-2A0A075B649 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13-2A0A075B649 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13-2A0A075B649 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13-2A0A075B649 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13-2A0A075B649 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13-2A0A075B649 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav13-2A0A075B649 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13-2A0A075B649 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms