Protein–RNA interactions for Protein: A0A075B640

Trav7-6, T cell receptor alpha variable 7-6 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-6A0A075B640 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trav7-6A0A075B640 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav7-6A0A075B640 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav7-6A0A075B640 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav7-6A0A075B640 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav7-6A0A075B640 AC115863.1-201ENSMUST00000214815 1813 ntBASIC11.22□□□□□ -0.61
Trav7-6A0A075B640 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav7-6A0A075B640 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC11.22□□□□□ -0.61
Trav7-6A0A075B640 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav7-6A0A075B640 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav7-6A0A075B640 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav7-6A0A075B640 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav7-6A0A075B640 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav7-6A0A075B640 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav7-6A0A075B640 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav7-6A0A075B640 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav7-6A0A075B640 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav7-6A0A075B640 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav7-6A0A075B640 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav7-6A0A075B640 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav7-6A0A075B640 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trav7-6A0A075B640 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav7-6A0A075B640 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav7-6A0A075B640 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav7-6A0A075B640 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Trav7-6A0A075B640 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav7-6A0A075B640 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav7-6A0A075B640 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav7-6A0A075B640 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav7-6A0A075B640 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav7-6A0A075B640 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav7-6A0A075B640 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav7-6A0A075B640 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav7-6A0A075B640 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav7-6A0A075B640 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav7-6A0A075B640 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav7-6A0A075B640 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav7-6A0A075B640 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav7-6A0A075B640 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav7-6A0A075B640 Gm22240-201ENSMUST00000175225 82 ntBASIC11.21□□□□□ -0.61
Trav7-6A0A075B640 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav7-6A0A075B640 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav7-6A0A075B640 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav7-6A0A075B640 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.62
Trav7-6A0A075B640 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav7-6A0A075B640 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav7-6A0A075B640 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav7-6A0A075B640 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav7-6A0A075B640 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Trav7-6A0A075B640 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav7-6A0A075B640 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav7-6A0A075B640 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav7-6A0A075B640 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7-6A0A075B640 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7-6A0A075B640 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Trav7-6A0A075B640 Actl10-202ENSMUST00000226583 1501 ntBASIC11.2□□□□□ -0.62
Trav7-6A0A075B640 Prob1-201ENSMUST00000097619 3021 ntBASIC11.2□□□□□ -0.62
Trav7-6A0A075B640 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7-6A0A075B640 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7-6A0A075B640 Gfra2-202ENSMUST00000227633 1480 ntBASIC11.2□□□□□ -0.62
Trav7-6A0A075B640 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Trav7-6A0A075B640 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC11.2□□□□□ -0.62
Trav7-6A0A075B640 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7-6A0A075B640 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7-6A0A075B640 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7-6A0A075B640 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7-6A0A075B640 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC11.2□□□□□ -0.62
Trav7-6A0A075B640 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC11.2□□□□□ -0.62
Trav7-6A0A075B640 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7-6A0A075B640 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7-6A0A075B640 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC11.2□□□□□ -0.62
Trav7-6A0A075B640 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC11.2□□□□□ -0.62
Trav7-6A0A075B640 Gm43353-201ENSMUST00000199224 1295 ntBASIC11.2□□□□□ -0.62
Trav7-6A0A075B640 Gm21814-202ENSMUST00000203277 873 ntBASIC11.2□□□□□ -0.62
Trav7-6A0A075B640 AC135963.1-201ENSMUST00000211640 717 ntBASIC11.2□□□□□ -0.62
Trav7-6A0A075B640 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7-6A0A075B640 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7-6A0A075B640 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
Trav7-6A0A075B640 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7-6A0A075B640 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7-6A0A075B640 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7-6A0A075B640 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7-6A0A075B640 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7-6A0A075B640 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-6A0A075B640 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-6A0A075B640 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-6A0A075B640 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trav7-6A0A075B640 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-6A0A075B640 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-6A0A075B640 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC11.19□□□□□ -0.62
Trav7-6A0A075B640 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-6A0A075B640 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trav7-6A0A075B640 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-6A0A075B640 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-6A0A075B640 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-6A0A075B640 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Trav7-6A0A075B640 Gm10676-201ENSMUST00000098778 3221 ntBASIC11.19□□□□□ -0.62
Trav7-6A0A075B640 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-6A0A075B640 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7-6A0A075B640 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms