Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8n-2A0A075B633 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8n-2A0A075B633 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8n-2A0A075B633 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8n-2A0A075B633 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav8n-2A0A075B633 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trav8n-2A0A075B633 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8n-2A0A075B633 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8n-2A0A075B633 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8n-2A0A075B633 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8n-2A0A075B633 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8n-2A0A075B633 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8n-2A0A075B633 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8n-2A0A075B633 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trav8n-2A0A075B633 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.55□□□□□ -0.08
Trav8n-2A0A075B633 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.55□□□□□ -0.08
Trav8n-2A0A075B633 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8n-2A0A075B633 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.55□□□□□ -0.08
Trav8n-2A0A075B633 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8n-2A0A075B633 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8n-2A0A075B633 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8n-2A0A075B633 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8n-2A0A075B633 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav8n-2A0A075B633 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav8n-2A0A075B633 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav8n-2A0A075B633 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8n-2A0A075B633 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8n-2A0A075B633 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8n-2A0A075B633 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav8n-2A0A075B633 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8n-2A0A075B633 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.54□□□□□ -0.08
Trav8n-2A0A075B633 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8n-2A0A075B633 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8n-2A0A075B633 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.54□□□□□ -0.08
Trav8n-2A0A075B633 Gm19164-201ENSMUST00000210667 640 ntBASIC14.54□□□□□ -0.08
Trav8n-2A0A075B633 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.54□□□□□ -0.08
Trav8n-2A0A075B633 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.54□□□□□ -0.08
Trav8n-2A0A075B633 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trav8n-2A0A075B633 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav8n-2A0A075B633 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8n-2A0A075B633 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav8n-2A0A075B633 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav8n-2A0A075B633 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8n-2A0A075B633 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8n-2A0A075B633 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Trav8n-2A0A075B633 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8n-2A0A075B633 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8n-2A0A075B633 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8n-2A0A075B633 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav8n-2A0A075B633 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8n-2A0A075B633 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8n-2A0A075B633 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav8n-2A0A075B633 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav8n-2A0A075B633 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8n-2A0A075B633 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8n-2A0A075B633 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Trav8n-2A0A075B633 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8n-2A0A075B633 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8n-2A0A075B633 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trav8n-2A0A075B633 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8n-2A0A075B633 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8n-2A0A075B633 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8n-2A0A075B633 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trav8n-2A0A075B633 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8n-2A0A075B633 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8n-2A0A075B633 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Trav8n-2A0A075B633 Gm18489-201ENSMUST00000172565 551 ntBASIC14.53□□□□□ -0.08
Trav8n-2A0A075B633 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.53□□□□□ -0.08
Trav8n-2A0A075B633 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.53□□□□□ -0.08
Trav8n-2A0A075B633 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8n-2A0A075B633 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8n-2A0A075B633 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trav8n-2A0A075B633 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trav8n-2A0A075B633 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8n-2A0A075B633 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav8n-2A0A075B633 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8n-2A0A075B633 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.53□□□□□ -0.08
Trav8n-2A0A075B633 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8n-2A0A075B633 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav8n-2A0A075B633 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Trav8n-2A0A075B633 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Trav8n-2A0A075B633 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav8n-2A0A075B633 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav8n-2A0A075B633 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav8n-2A0A075B633 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Trav8n-2A0A075B633 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav8n-2A0A075B633 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Trav8n-2A0A075B633 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.52□□□□□ -0.09
Trav8n-2A0A075B633 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.52□□□□□ -0.09
Trav8n-2A0A075B633 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.52□□□□□ -0.09
Trav8n-2A0A075B633 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav8n-2A0A075B633 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav8n-2A0A075B633 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.52□□□□□ -0.09
Trav8n-2A0A075B633 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav8n-2A0A075B633 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav8n-2A0A075B633 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trav8n-2A0A075B633 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav8n-2A0A075B633 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav8n-2A0A075B633 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav8n-2A0A075B633 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms