Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-5A0A075B621 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Trav6n-5A0A075B621 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav6n-5A0A075B621 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav6n-5A0A075B621 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-5A0A075B621 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-5A0A075B621 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-5A0A075B621 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav6n-5A0A075B621 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-5A0A075B621 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-5A0A075B621 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-5A0A075B621 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav6n-5A0A075B621 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav6n-5A0A075B621 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-5A0A075B621 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-5A0A075B621 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-5A0A075B621 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-5A0A075B621 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-5A0A075B621 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-5A0A075B621 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-5A0A075B621 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-5A0A075B621 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-5A0A075B621 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-5A0A075B621 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav6n-5A0A075B621 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-5A0A075B621 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-5A0A075B621 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-5A0A075B621 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6n-5A0A075B621 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6n-5A0A075B621 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Trav6n-5A0A075B621 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6n-5A0A075B621 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav6n-5A0A075B621 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
Trav6n-5A0A075B621 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6n-5A0A075B621 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6n-5A0A075B621 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6n-5A0A075B621 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6n-5A0A075B621 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6n-5A0A075B621 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6n-5A0A075B621 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6n-5A0A075B621 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Trav6n-5A0A075B621 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6n-5A0A075B621 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav6n-5A0A075B621 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav6n-5A0A075B621 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6n-5A0A075B621 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav6n-5A0A075B621 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6n-5A0A075B621 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6n-5A0A075B621 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6n-5A0A075B621 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6n-5A0A075B621 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6n-5A0A075B621 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6n-5A0A075B621 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6n-5A0A075B621 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6n-5A0A075B621 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6n-5A0A075B621 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav6n-5A0A075B621 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav6n-5A0A075B621 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6n-5A0A075B621 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6n-5A0A075B621 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav6n-5A0A075B621 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC12.37□□□□□ -0.43
Trav6n-5A0A075B621 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.37□□□□□ -0.43
Trav6n-5A0A075B621 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav6n-5A0A075B621 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav6n-5A0A075B621 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6n-5A0A075B621 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6n-5A0A075B621 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6n-5A0A075B621 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav6n-5A0A075B621 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6n-5A0A075B621 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6n-5A0A075B621 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav6n-5A0A075B621 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC12.37□□□□□ -0.43
Trav6n-5A0A075B621 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6n-5A0A075B621 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6n-5A0A075B621 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6n-5A0A075B621 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6n-5A0A075B621 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav6n-5A0A075B621 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6n-5A0A075B621 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6n-5A0A075B621 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Trav6n-5A0A075B621 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.37□□□□□ -0.43
Trav6n-5A0A075B621 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav6n-5A0A075B621 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.37□□□□□ -0.43
Trav6n-5A0A075B621 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6n-5A0A075B621 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6n-5A0A075B621 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6n-5A0A075B621 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav6n-5A0A075B621 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6n-5A0A075B621 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6n-5A0A075B621 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav6n-5A0A075B621 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6n-5A0A075B621 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6n-5A0A075B621 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6n-5A0A075B621 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6n-5A0A075B621 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6n-5A0A075B621 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6n-5A0A075B621 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6n-5A0A075B621 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6n-5A0A075B621 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6n-5A0A075B621 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms