Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trav4n-4A0A075B615 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav4n-4A0A075B615 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Trav4n-4A0A075B615 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav4n-4A0A075B615 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav4n-4A0A075B615 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Trav4n-4A0A075B615 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav4n-4A0A075B615 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav4n-4A0A075B615 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav4n-4A0A075B615 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav4n-4A0A075B615 AC167013.2-201ENSMUST00000228520 2684 ntBASIC11.09□□□□□ -0.63
Trav4n-4A0A075B615 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav4n-4A0A075B615 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Trav4n-4A0A075B615 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav4n-4A0A075B615 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav4n-4A0A075B615 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav4n-4A0A075B615 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav4n-4A0A075B615 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav4n-4A0A075B615 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav4n-4A0A075B615 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav4n-4A0A075B615 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav4n-4A0A075B615 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.08□□□□□ -0.64
Trav4n-4A0A075B615 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav4n-4A0A075B615 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav4n-4A0A075B615 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Trav4n-4A0A075B615 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC11.08□□□□□ -0.64
Trav4n-4A0A075B615 Gm17661-201ENSMUST00000170317 270 ntBASIC11.08□□□□□ -0.64
Trav4n-4A0A075B615 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC11.08□□□□□ -0.64
Trav4n-4A0A075B615 AC140930.3-201ENSMUST00000222935 274 ntBASIC11.08□□□□□ -0.64
Trav4n-4A0A075B615 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav4n-4A0A075B615 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav4n-4A0A075B615 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav4n-4A0A075B615 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav4n-4A0A075B615 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav4n-4A0A075B615 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav4n-4A0A075B615 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav4n-4A0A075B615 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav4n-4A0A075B615 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav4n-4A0A075B615 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav4n-4A0A075B615 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav4n-4A0A075B615 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav4n-4A0A075B615 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav4n-4A0A075B615 Gm45203-201ENSMUST00000206384 1831 ntBASIC11.07□□□□□ -0.64
Trav4n-4A0A075B615 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Trav4n-4A0A075B615 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav4n-4A0A075B615 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav4n-4A0A075B615 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav4n-4A0A075B615 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav4n-4A0A075B615 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trav4n-4A0A075B615 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav4n-4A0A075B615 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav4n-4A0A075B615 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav4n-4A0A075B615 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Trav4n-4A0A075B615 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav4n-4A0A075B615 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav4n-4A0A075B615 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC11.07□□□□□ -0.64
Trav4n-4A0A075B615 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav4n-4A0A075B615 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav4n-4A0A075B615 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav4n-4A0A075B615 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav4n-4A0A075B615 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Trav4n-4A0A075B615 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav4n-4A0A075B615 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav4n-4A0A075B615 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav4n-4A0A075B615 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trav4n-4A0A075B615 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trav4n-4A0A075B615 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav4n-4A0A075B615 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav4n-4A0A075B615 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav4n-4A0A075B615 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4n-4A0A075B615 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Trav4n-4A0A075B615 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4n-4A0A075B615 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4n-4A0A075B615 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4n-4A0A075B615 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4n-4A0A075B615 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4n-4A0A075B615 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4n-4A0A075B615 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC11.06□□□□□ -0.64
Trav4n-4A0A075B615 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4n-4A0A075B615 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4n-4A0A075B615 Sorbs3-204ENSMUST00000227929 2460 ntBASIC11.06□□□□□ -0.64
Trav4n-4A0A075B615 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4n-4A0A075B615 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC11.06□□□□□ -0.64
Trav4n-4A0A075B615 Gm27000-201ENSMUST00000182943 842 ntBASIC11.06□□□□□ -0.64
Trav4n-4A0A075B615 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4n-4A0A075B615 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4n-4A0A075B615 Rps24-207ENSMUST00000224568 714 ntBASIC11.06□□□□□ -0.64
Trav4n-4A0A075B615 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4n-4A0A075B615 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4n-4A0A075B615 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4n-4A0A075B615 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4n-4A0A075B615 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4n-4A0A075B615 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4n-4A0A075B615 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4n-4A0A075B615 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4n-4A0A075B615 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4n-4A0A075B615 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4n-4A0A075B615 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4n-4A0A075B615 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav4n-4A0A075B615 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms