Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.67□□□□□ -0.22
Trav5-1A0A075B5Z7 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.67□□□□□ -0.22
Trav5-1A0A075B5Z7 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.67□□□□□ -0.22
Trav5-1A0A075B5Z7 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5-1A0A075B5Z7 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav5-1A0A075B5Z7 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5-1A0A075B5Z7 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav5-1A0A075B5Z7 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5-1A0A075B5Z7 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav5-1A0A075B5Z7 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5-1A0A075B5Z7 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5-1A0A075B5Z7 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5-1A0A075B5Z7 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav5-1A0A075B5Z7 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5-1A0A075B5Z7 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5-1A0A075B5Z7 Ddx41-204ENSMUST00000224765 2199 ntBASIC13.66□□□□□ -0.22
Trav5-1A0A075B5Z7 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5-1A0A075B5Z7 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5-1A0A075B5Z7 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5-1A0A075B5Z7 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5-1A0A075B5Z7 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav5-1A0A075B5Z7 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav5-1A0A075B5Z7 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5-1A0A075B5Z7 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav5-1A0A075B5Z7 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5-1A0A075B5Z7 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav5-1A0A075B5Z7 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5-1A0A075B5Z7 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5-1A0A075B5Z7 Gm8344-201ENSMUST00000119813 856 ntBASIC13.66□□□□□ -0.22
Trav5-1A0A075B5Z7 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Trav5-1A0A075B5Z7 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5-1A0A075B5Z7 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5-1A0A075B5Z7 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5-1A0A075B5Z7 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.66□□□□□ -0.22
Trav5-1A0A075B5Z7 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.66□□□□□ -0.22
Trav5-1A0A075B5Z7 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Trav5-1A0A075B5Z7 Gm10060-201ENSMUST00000212002 111 ntBASIC13.66□□□□□ -0.22
Trav5-1A0A075B5Z7 Gm18622-201ENSMUST00000219361 595 ntBASIC13.66□□□□□ -0.22
Trav5-1A0A075B5Z7 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5-1A0A075B5Z7 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.66□□□□□ -0.22
Trav5-1A0A075B5Z7 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav5-1A0A075B5Z7 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5-1A0A075B5Z7 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav5-1A0A075B5Z7 Gm15743-202ENSMUST00000182690 1901 ntBASIC13.66□□□□□ -0.22
Trav5-1A0A075B5Z7 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav5-1A0A075B5Z7 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5-1A0A075B5Z7 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5-1A0A075B5Z7 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Trav5-1A0A075B5Z7 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5-1A0A075B5Z7 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav5-1A0A075B5Z7 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5-1A0A075B5Z7 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5-1A0A075B5Z7 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5-1A0A075B5Z7 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.65□□□□□ -0.22
Trav5-1A0A075B5Z7 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5-1A0A075B5Z7 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5-1A0A075B5Z7 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Trav5-1A0A075B5Z7 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5-1A0A075B5Z7 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5-1A0A075B5Z7 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5-1A0A075B5Z7 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5-1A0A075B5Z7 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav5-1A0A075B5Z7 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trav5-1A0A075B5Z7 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5-1A0A075B5Z7 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5-1A0A075B5Z7 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.65□□□□□ -0.22
Trav5-1A0A075B5Z7 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5-1A0A075B5Z7 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5-1A0A075B5Z7 Gm13418-201ENSMUST00000119097 944 ntBASIC13.65□□□□□ -0.22
Trav5-1A0A075B5Z7 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Trav5-1A0A075B5Z7 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav5-1A0A075B5Z7 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5-1A0A075B5Z7 Gm7230-201ENSMUST00000173026 815 ntBASIC13.65□□□□□ -0.22
Trav5-1A0A075B5Z7 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.65□□□□□ -0.22
Trav5-1A0A075B5Z7 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.65□□□□□ -0.22
Trav5-1A0A075B5Z7 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.65□□□□□ -0.22
Trav5-1A0A075B5Z7 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav5-1A0A075B5Z7 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5-1A0A075B5Z7 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5-1A0A075B5Z7 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5-1A0A075B5Z7 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5-1A0A075B5Z7 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5-1A0A075B5Z7 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav5-1A0A075B5Z7 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-1A0A075B5Z7 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-1A0A075B5Z7 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav5-1A0A075B5Z7 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.64□□□□□ -0.23
Trav5-1A0A075B5Z7 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-1A0A075B5Z7 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-1A0A075B5Z7 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Trav5-1A0A075B5Z7 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-1A0A075B5Z7 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-1A0A075B5Z7 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-1A0A075B5Z7 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-1A0A075B5Z7 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-1A0A075B5Z7 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-1A0A075B5Z7 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-1A0A075B5Z7 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-1A0A075B5Z7 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-1A0A075B5Z7 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms