Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 AC010487.4-201ENST00000637027 61 ntBASIC0.3□□□□□ -2.36
KRTAP4-3Q9BYR4 MIR330-201ENST00000362196 94 ntBASIC0.29□□□□□ -2.36
KRTAP4-3Q9BYR4 RNA5SP327-201ENST00000362494 101 ntBASIC0.29□□□□□ -2.36
KRTAP4-3Q9BYR4 SNORD114-23-201ENST00000363536 72 ntBASIC0.29□□□□□ -2.36
KRTAP4-3Q9BYR4 SNORD114-24-201ENST00000365029 72 ntBASIC0.29□□□□□ -2.36
KRTAP4-3Q9BYR4 RNU6-46P-201ENST00000383860 107 ntBASIC0.29□□□□□ -2.36
KRTAP4-3Q9BYR4 SNORD23.1-201ENST00000408212 104 ntBASIC0.29□□□□□ -2.36
KRTAP4-3Q9BYR4 RNU4-63P-201ENST00000411313 118 ntBASIC0.29□□□□□ -2.36
KRTAP4-3Q9BYR4 AC104692.1-201ENST00000472406 90 ntBASIC0.29□□□□□ -2.36
KRTAP4-3Q9BYR4 RNA5SP285-201ENST00000516619 119 ntBASIC0.29□□□□□ -2.36
KRTAP4-3Q9BYR4 MIR5589-201ENST00000579442 60 ntBASIC0.29□□□□□ -2.36
KRTAP4-3Q9BYR4 MIR4306-201ENST00000583390 91 ntBASIC0.29□□□□□ -2.36
KRTAP4-3Q9BYR4 AC211469.2-201ENST00000605461 205 ntBASIC0.29□□□□□ -2.36
KRTAP4-3Q9BYR4 RNA5SP499-201ENST00000363982 119 ntBASIC0.28□□□□□ -2.36
KRTAP4-3Q9BYR4 SNORD56.5-201ENST00000364281 72 ntBASIC0.28□□□□□ -2.36
KRTAP4-3Q9BYR4 MIR508-201ENST00000384857 115 ntBASIC0.28□□□□□ -2.36
KRTAP4-3Q9BYR4 MIR532-201ENST00000385025 91 ntBASIC0.28□□□□□ -2.36
KRTAP4-3Q9BYR4 MIR204-201ENST00000385200 110 ntBASIC0.28□□□□□ -2.36
KRTAP4-3Q9BYR4 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
KRTAP4-3Q9BYR4 RNU6-576P-201ENST00000390854 102 ntBASIC0.28□□□□□ -2.36
KRTAP4-3Q9BYR4 MIR936-201ENST00000401264 98 ntBASIC0.28□□□□□ -2.36
KRTAP4-3Q9BYR4 RNU6-758P-201ENST00000516292 89 ntBASIC0.28□□□□□ -2.36
KRTAP4-3Q9BYR4 AC245884.12-201ENST00000615364 59 ntBASIC0.28□□□□□ -2.36
KRTAP4-3Q9BYR4 SNORD49B-201ENST00000365172 72 ntBASIC0.27□□□□□ -2.37
KRTAP4-3Q9BYR4 RNU6-955P-201ENST00000410497 104 ntBASIC0.27□□□□□ -2.37
KRTAP4-3Q9BYR4 Y_RNA.610-201ENST00000410681 103 ntBASIC0.27□□□□□ -2.37
KRTAP4-3Q9BYR4 RNA5SP25-201ENST00000410815 110 ntBASIC0.27□□□□□ -2.37
KRTAP4-3Q9BYR4 MIR2909-201ENST00000617113 69 ntBASIC0.27□□□□□ -2.37
KRTAP4-3Q9BYR4 RNU7-165P-201ENST00000458864 60 ntBASIC0.26□□□□□ -2.37
KRTAP4-3Q9BYR4 RNA5SP404-201ENST00000517118 132 ntBASIC0.26□□□□□ -2.37
KRTAP4-3Q9BYR4 MIR4661-201ENST00000582720 75 ntBASIC0.26□□□□□ -2.37
KRTAP4-3Q9BYR4 MIR6513-201ENST00000621188 64 ntBASIC0.26□□□□□ -2.37
KRTAP4-3Q9BYR4 SNORD44.1-201ENST00000363202 61 ntBASIC0.25□□□□□ -2.37
KRTAP4-3Q9BYR4 RNU6-815P-201ENST00000384080 113 ntBASIC0.25□□□□□ -2.37
KRTAP4-3Q9BYR4 Y_RNA.484-201ENST00000384389 103 ntBASIC0.25□□□□□ -2.37
KRTAP4-3Q9BYR4 MIR604-201ENST00000384880 94 ntBASIC0.25□□□□□ -2.37
KRTAP4-3Q9BYR4 MIR150-201ENST00000385048 84 ntBASIC0.25□□□□□ -2.37
KRTAP4-3Q9BYR4 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.25□□□□□ -2.37
KRTAP4-3Q9BYR4 MIR4436A-201ENST00000585278 85 ntBASIC0.25□□□□□ -2.37
KRTAP4-3Q9BYR4 MIR6759-201ENST00000638110 65 ntBASIC0.25□□□□□ -2.37
KRTAP4-3Q9BYR4 SNORD114-25-201ENST00000363742 72 ntBASIC0.24□□□□□ -2.37
KRTAP4-3Q9BYR4 SNORD114-2-201ENST00000363953 78 ntBASIC0.24□□□□□ -2.37
KRTAP4-3Q9BYR4 MIR224-201ENST00000384889 81 ntBASIC0.24□□□□□ -2.37
KRTAP4-3Q9BYR4 MIR17-201ENST00000385012 84 ntBASIC0.24□□□□□ -2.37
KRTAP4-3Q9BYR4 RNA5SP193-201ENST00000410353 107 ntBASIC0.24□□□□□ -2.37
KRTAP4-3Q9BYR4 RPS29P8-201ENST00000445109 171 ntBASIC0.24□□□□□ -2.37
KRTAP4-3Q9BYR4 RNU7-159P-201ENST00000459284 62 ntBASIC0.24□□□□□ -2.37
KRTAP4-3Q9BYR4 RNU6-351P-201ENST00000516097 100 ntBASIC0.24□□□□□ -2.37
KRTAP4-3Q9BYR4 MIR548AX-201ENST00000580117 73 ntBASIC0.24□□□□□ -2.37
KRTAP4-3Q9BYR4 AC103810.9-201ENST00000606688 112 ntBASIC0.24□□□□□ -2.37
KRTAP4-3Q9BYR4 MIR103A1-201ENST00000362165 78 ntBASIC0.23□□□□□ -2.37
KRTAP4-3Q9BYR4 SNORA18.1-201ENST00000363418 128 ntBASIC0.23□□□□□ -2.37
KRTAP4-3Q9BYR4 SNORD114-11-201ENST00000363738 75 ntBASIC0.23□□□□□ -2.37
KRTAP4-3Q9BYR4 MIR593-201ENST00000384856 100 ntBASIC0.23□□□□□ -2.37
KRTAP4-3Q9BYR4 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
KRTAP4-3Q9BYR4 MIR4653-201ENST00000585107 83 ntBASIC0.23□□□□□ -2.37
KRTAP4-3Q9BYR4 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
KRTAP4-3Q9BYR4 SNORD114-31-201ENST00000363219 75 ntBASIC0.22□□□□□ -2.37
KRTAP4-3Q9BYR4 SNORD95.1-201ENST00000364099 68 ntBASIC0.22□□□□□ -2.37
KRTAP4-3Q9BYR4 RPL39P28-201ENST00000465655 155 ntBASIC0.22□□□□□ -2.37
KRTAP4-3Q9BYR4 AC021146.6-201ENST00000514659 117 ntBASIC0.22□□□□□ -2.37
KRTAP4-3Q9BYR4 RNU6-1236P-201ENST00000517080 99 ntBASIC0.22□□□□□ -2.37
KRTAP4-3Q9BYR4 MIR4743-201ENST00000584576 69 ntBASIC0.22□□□□□ -2.37
KRTAP4-3Q9BYR4 MIR6857-201ENST00000613267 93 ntBASIC0.22□□□□□ -2.37
KRTAP4-3Q9BYR4 MIR6866-201ENST00000638146 69 ntBASIC0.22□□□□□ -2.37
KRTAP4-3Q9BYR4 MIR145-201ENST00000384967 88 ntBASIC0.21□□□□□ -2.38
KRTAP4-3Q9BYR4 SNORA68.3-201ENST00000515906 83 ntBASIC0.21□□□□□ -2.38
KRTAP4-3Q9BYR4 SCARNA20.2-201ENST00000516052 116 ntBASIC0.21□□□□□ -2.38
KRTAP4-3Q9BYR4 AC069113.3-201ENST00000521019 150 ntBASIC0.21□□□□□ -2.38
KRTAP4-3Q9BYR4 MIR4711-201ENST00000578274 70 ntBASIC0.21□□□□□ -2.38
KRTAP4-3Q9BYR4 MIR3165-201ENST00000579874 75 ntBASIC0.21□□□□□ -2.38
KRTAP4-3Q9BYR4 MIR4493-201ENST00000584016 73 ntBASIC0.21□□□□□ -2.38
KRTAP4-3Q9BYR4 uc_338.19-201ENST00000616808 99 ntBASIC0.21□□□□□ -2.38
KRTAP4-3Q9BYR4 SNORD26-201ENST00000384147 75 ntBASIC0.2□□□□□ -2.38
KRTAP4-3Q9BYR4 MIR610-201ENST00000385139 96 ntBASIC0.2□□□□□ -2.38
KRTAP4-3Q9BYR4 MIR676-201ENST00000390702 67 ntBASIC0.2□□□□□ -2.38
KRTAP4-3Q9BYR4 RNA5SP63-201ENST00000391225 112 ntBASIC0.2□□□□□ -2.38
KRTAP4-3Q9BYR4 SNORD126-201ENST00000459475 77 ntBASIC0.2□□□□□ -2.38
KRTAP4-3Q9BYR4 MIR608-201ENST00000384820 100 ntBASIC0.19□□□□□ -2.38
KRTAP4-3Q9BYR4 MIR4788-201ENST00000639104 80 ntBASIC0.19□□□□□ -2.38
KRTAP4-3Q9BYR4 MIRLET7D-201ENST00000362263 87 ntBASIC0.18□□□□□ -2.38
KRTAP4-3Q9BYR4 MIR8064-201ENST00000612863 90 ntBASIC0.18□□□□□ -2.38
KRTAP4-3Q9BYR4 MIR101-1-201ENST00000362265 75 ntBASIC0.17□□□□□ -2.38
KRTAP4-3Q9BYR4 RNA5SP347-201ENST00000362445 119 ntBASIC0.17□□□□□ -2.38
KRTAP4-3Q9BYR4 MIR92A1-201ENST00000385233 78 ntBASIC0.17□□□□□ -2.38
KRTAP4-3Q9BYR4 RNA5SP451-201ENST00000410588 110 ntBASIC0.17□□□□□ -2.38
KRTAP4-3Q9BYR4 Y_RNA.696-201ENST00000516725 107 ntBASIC0.17□□□□□ -2.38
KRTAP4-3Q9BYR4 MIR4514-201ENST00000581410 57 ntBASIC0.17□□□□□ -2.38
KRTAP4-3Q9BYR4 AC023932.2-201ENST00000603176 175 ntBASIC0.17□□□□□ -2.38
KRTAP4-3Q9BYR4 SNORD114-14-201ENST00000362723 75 ntBASIC0.16□□□□□ -2.38
KRTAP4-3Q9BYR4 SNORD83B-201ENST00000386745 93 ntBASIC0.16□□□□□ -2.38
KRTAP4-3Q9BYR4 SNORA3B-201ENST00000391305 131 ntBASIC0.16□□□□□ -2.38
KRTAP4-3Q9BYR4 MIR4315-1-201ENST00000636800 73 ntBASIC0.16□□□□□ -2.38
KRTAP4-3Q9BYR4 MIR4315-2-201ENST00000640925 73 ntBASIC0.16□□□□□ -2.38
KRTAP4-3Q9BYR4 MIR26B-201ENST00000362251 77 ntBASIC0.15□□□□□ -2.39
KRTAP4-3Q9BYR4 SNORD114-12-201ENST00000365400 75 ntBASIC0.15□□□□□ -2.39
KRTAP4-3Q9BYR4 AC114737.2-201ENST00000421583 173 ntBASIC0.15□□□□□ -2.39
KRTAP4-3Q9BYR4 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.15□□□□□ -2.39
KRTAP4-3Q9BYR4 RNA5SP214-201ENST00000363378 118 ntBASIC0.14□□□□□ -2.39
KRTAP4-3Q9BYR4 SNORD114-28-201ENST00000363610 72 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 7.4 ms