Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 RNU6-230P-201ENST00000362457 104 ntBASIC-2.88□□□□□ -2.87
CHMP4CQ96CF2 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.88□□□□□ -2.87
CHMP4CQ96CF2 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.88□□□□□ -2.87
CHMP4CQ96CF2 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.88□□□□□ -2.87
CHMP4CQ96CF2 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.88□□□□□ -2.87
CHMP4CQ96CF2 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.88□□□□□ -2.87
CHMP4CQ96CF2 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.88□□□□□ -2.87
CHMP4CQ96CF2 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.89□□□□□ -2.87
CHMP4CQ96CF2 RNU6-912P-201ENST00000363800 104 ntBASIC-2.89□□□□□ -2.87
CHMP4CQ96CF2 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.89□□□□□ -2.87
CHMP4CQ96CF2 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.9□□□□□ -2.87
CHMP4CQ96CF2 RNA5SP93-201ENST00000362525 114 ntBASIC-2.91□□□□□ -2.88
CHMP4CQ96CF2 RNU6-614P-201ENST00000384369 107 ntBASIC-2.91□□□□□ -2.88
CHMP4CQ96CF2 U6.59-201ENST00000615686 107 ntBASIC-2.91□□□□□ -2.88
CHMP4CQ96CF2 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-2.92□□□□□ -2.88
CHMP4CQ96CF2 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.93□□□□□ -2.88
CHMP4CQ96CF2 RNY4P9-201ENST00000363194 97 ntBASIC-2.93□□□□□ -2.88
CHMP4CQ96CF2 RNU6-936P-201ENST00000384005 107 ntBASIC-2.93□□□□□ -2.88
CHMP4CQ96CF2 RNU6-822P-201ENST00000362707 106 ntBASIC-2.94□□□□□ -2.88
CHMP4CQ96CF2 RNU6-1204P-201ENST00000363948 107 ntBASIC-2.94□□□□□ -2.88
CHMP4CQ96CF2 SNORD113-3-201ENST00000364830 72 ntBASIC-2.95□□□□□ -2.88
CHMP4CQ96CF2 Y_RNA.379-201ENST00000365653 102 ntBASIC-2.96□□□□□ -2.88
CHMP4CQ96CF2 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.96□□□□□ -2.88
CHMP4CQ96CF2 RNU6-141P-201ENST00000410499 105 ntBASIC-2.96□□□□□ -2.88
CHMP4CQ96CF2 RNY4-201ENST00000516507 96 ntBASIC-2.99□□□□□ -2.89
CHMP4CQ96CF2 RNU6-838P-201ENST00000363399 108 ntBASIC-3□□□□□ -2.89
CHMP4CQ96CF2 Y_RNA.397-201ENST00000383950 98 ntBASIC-3.01□□□□□ -2.89
CHMP4CQ96CF2 RNU6-1191P-201ENST00000516799 107 ntBASIC-3.01□□□□□ -2.89
CHMP4CQ96CF2 RNU6-753P-201ENST00000363926 107 ntBASIC-3.02□□□□□ -2.89
CHMP4CQ96CF2 SNX3P1Y-201ENST00000615757 176 ntBASIC-3.02□□□□□ -2.89
CHMP4CQ96CF2 RNU6-808P-201ENST00000391233 108 ntBASIC-3.04□□□□□ -2.9
CHMP4CQ96CF2 MIR1254-1-201ENST00000408257 97 ntBASIC-3.09□□□□□ -2.9
CHMP4CQ96CF2 MIR548H4-201ENST00000408689 111 ntBASIC-3.09□□□□□ -2.9
CHMP4CQ96CF2 Y_RNA.382-201ENST00000365672 114 ntBASIC-3.1□□□□□ -2.91
CHMP4CQ96CF2 Y_RNA.434-201ENST00000384090 100 ntBASIC-3.11□□□□□ -2.91
CHMP4CQ96CF2 Y_RNA.519-201ENST00000384553 102 ntBASIC-3.13□□□□□ -2.91
CHMP4CQ96CF2 RNU6-345P-201ENST00000517001 107 ntBASIC-3.14□□□□□ -2.91
CHMP4CQ96CF2 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-3.14□□□□□ -2.91
CHMP4CQ96CF2 RNU6-1326P-201ENST00000391262 107 ntBASIC-3.15□□□□□ -2.91
CHMP4CQ96CF2 MTND4LP19-201ENST00000403051 166 ntBASIC-3.17□□□□□ -2.92
CHMP4CQ96CF2 RNU6-930P-201ENST00000390938 100 ntBASIC-3.18□□□□□ -2.92
CHMP4CQ96CF2 RNU6-1008P-201ENST00000384160 104 ntBASIC-3.21□□□□□ -2.92
CHMP4CQ96CF2 SNORD115.2-201ENST00000391126 59 ntBASIC-3.23□□□□□ -2.93
CHMP4CQ96CF2 RNU6-1169P-201ENST00000363537 103 ntBASIC-3.24□□□□□ -2.93
CHMP4CQ96CF2 Y_RNA.345-201ENST00000365384 92 ntBASIC-3.25□□□□□ -2.93
CHMP4CQ96CF2 MIR5693-201ENST00000577722 73 ntBASIC-3.25□□□□□ -2.93
CHMP4CQ96CF2 Y_RNA.63-201ENST00000362841 102 ntBASIC-3.26□□□□□ -2.93
CHMP4CQ96CF2 RNU6-1277P-201ENST00000364561 107 ntBASIC-3.28□□□□□ -2.93
CHMP4CQ96CF2 Y_RNA.79-201ENST00000362992 113 ntBASIC-3.29□□□□□ -2.94
CHMP4CQ96CF2 Y_RNA.206-201ENST00000364136 102 ntBASIC-3.29□□□□□ -2.94
CHMP4CQ96CF2 Y_RNA.59-201ENST00000362828 102 ntBASIC-3.31□□□□□ -2.94
CHMP4CQ96CF2 Y_RNA.186-201ENST00000363899 92 ntBASIC-3.31□□□□□ -2.94
CHMP4CQ96CF2 RNY4P25-201ENST00000459254 96 ntBASIC-3.32□□□□□ -2.94
CHMP4CQ96CF2 MIR548F3-201ENST00000408509 87 ntBASIC-3.33□□□□□ -2.94
CHMP4CQ96CF2 Y_RNA.134-201ENST00000363435 105 ntBASIC-3.34□□□□□ -2.94
CHMP4CQ96CF2 Y_RNA.260-201ENST00000364628 101 ntBASIC-3.36□□□□□ -2.95
CHMP4CQ96CF2 RNU6-986P-201ENST00000363133 102 ntBASIC-3.38□□□□□ -2.95
CHMP4CQ96CF2 RNU6-836P-201ENST00000362920 107 ntBASIC-3.39□□□□□ -2.95
CHMP4CQ96CF2 RNA5SP224-201ENST00000365069 126 ntBASIC-3.41□□□□□ -2.96
CHMP4CQ96CF2 AL731768.1-201ENST00000603124 139 ntBASIC-3.41□□□□□ -2.96
CHMP4CQ96CF2 MIRLET7A3-201ENST00000362116 74 ntBASIC-3.43□□□□□ -2.96
CHMP4CQ96CF2 RNU6-803P-201ENST00000516034 102 ntBASIC-3.43□□□□□ -2.96
CHMP4CQ96CF2 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-3.44□□□□□ -2.96
CHMP4CQ96CF2 RNU6-59P-201ENST00000384787 107 ntBASIC-3.45□□□□□ -2.96
CHMP4CQ96CF2 Y_RNA.658-201ENST00000515990 97 ntBASIC-3.47□□□□□ -2.96
CHMP4CQ96CF2 SNORD45C-201ENST00000383893 79 ntBASIC-3.48□□□□□ -2.97
CHMP4CQ96CF2 DLEU2_4.2-201ENST00000616613 58 ntBASIC-3.48□□□□□ -2.97
CHMP4CQ96CF2 RNU6-1044P-201ENST00000384755 107 ntBASIC-3.49□□□□□ -2.97
CHMP4CQ96CF2 MIR545-201ENST00000385085 106 ntBASIC-3.49□□□□□ -2.97
CHMP4CQ96CF2 MIR656-201ENST00000385224 78 ntBASIC-3.49□□□□□ -2.97
CHMP4CQ96CF2 Y_RNA.335-201ENST00000365299 96 ntBASIC-3.51□□□□□ -2.97
CHMP4CQ96CF2 Y_RNA.830-201ENST00000628531 96 ntBASIC-3.51□□□□□ -2.97
CHMP4CQ96CF2 Y_RNA.266-201ENST00000364678 96 ntBASIC-3.54□□□□□ -2.98
CHMP4CQ96CF2 MIR509-1-201ENST00000385265 94 ntBASIC-3.56□□□□□ -2.98
CHMP4CQ96CF2 MIR509-2-201ENST00000390724 91 ntBASIC-3.56□□□□□ -2.98
CHMP4CQ96CF2 RNU6-737P-201ENST00000365370 107 ntBASIC-3.57□□□□□ -2.98
CHMP4CQ96CF2 Y_RNA.511-201ENST00000384514 103 ntBASIC-3.57□□□□□ -2.98
CHMP4CQ96CF2 Y_RNA.652-201ENST00000458902 102 ntBASIC-3.58□□□□□ -2.98
CHMP4CQ96CF2 RNU6-1340P-201ENST00000384438 107 ntBASIC-3.61□□□□□ -2.99
CHMP4CQ96CF2 Y_RNA.612-201ENST00000410717 95 ntBASIC-3.61□□□□□ -2.99
CHMP4CQ96CF2 Y_RNA.663-201ENST00000516043 101 ntBASIC-3.62□□□□□ -2.99
CHMP4CQ96CF2 AL359920.1-201ENST00000618332 176 ntBASIC-3.63□□□□□ -2.99
CHMP4CQ96CF2 RNU6-1121P-201ENST00000516802 109 ntBASIC-3.67□□□□□ -3
CHMP4CQ96CF2 RNU6-987P-201ENST00000384759 104 ntBASIC-3.68□□□□□ -3
CHMP4CQ96CF2 RNU4-37P-201ENST00000410214 84 ntBASIC-3.69□□□□□ -3
CHMP4CQ96CF2 Y_RNA.566-201ENST00000384735 101 ntBASIC-3.71□□□□□ -3
CHMP4CQ96CF2 SNORD114-13-201ENST00000364377 74 ntBASIC-3.72□□□□□ -3
CHMP4CQ96CF2 RNA5SP106-201ENST00000517274 100 ntBASIC-3.72□□□□□ -3
CHMP4CQ96CF2 RNU6-854P-201ENST00000364036 107 ntBASIC-3.73□□□□□ -3.01
CHMP4CQ96CF2 RNY4P10-201ENST00000365571 96 ntBASIC-3.73□□□□□ -3.01
CHMP4CQ96CF2 SNORD115-45-201ENST00000391078 81 ntBASIC-3.73□□□□□ -3.01
CHMP4CQ96CF2 Y_RNA.657-201ENST00000515983 102 ntBASIC-3.84□□□□□ -3.02
CHMP4CQ96CF2 RNU6-1161P-201ENST00000516176 102 ntBASIC-3.88□□□□□ -3.03
CHMP4CQ96CF2 MIR124-1-201ENST00000385275 85 ntBASIC-3.89□□□□□ -3.03
CHMP4CQ96CF2 MIR548AH-201ENST00000637109 76 ntBASIC-3.94□□□□□ -3.04
CHMP4CQ96CF2 Y_RNA.137-201ENST00000363455 112 ntBASIC-3.99□□□□□ -3.05
CHMP4CQ96CF2 RNU6-422P-201ENST00000384632 107 ntBASIC-4.05□□□□□ -3.06
CHMP4CQ96CF2 U6.103-201ENST00000637085 61 ntBASIC-4.06□□□□□ -3.06
CHMP4CQ96CF2 RNU6-665P-201ENST00000384639 107 ntBASIC-4.1□□□□□ -3.07
CHMP4CQ96CF2 Y_RNA.406-201ENST00000383984 100 ntBASIC-4.11□□□□□ -3.07
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms