Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 MIR548AL-201ENST00000578416 97 ntBASIC-2.5□□□□□ -2.81
O00370 FTX_4.1-201ENST00000616291 147 ntBASIC-2.5□□□□□ -2.81
O00370 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-2.51□□□□□ -2.81
O00370 Y_RNA.382-201ENST00000365672 114 ntBASIC-2.54□□□□□ -2.82
O00370 RNA5SP405-201ENST00000363059 114 ntBASIC-2.55□□□□□ -2.82
O00370 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.55□□□□□ -2.82
O00370 Y_RNA.434-201ENST00000384090 100 ntBASIC-2.56□□□□□ -2.82
O00370 RNU6-1204P-201ENST00000363948 107 ntBASIC-2.57□□□□□ -2.82
O00370 Y_RNA.379-201ENST00000365653 102 ntBASIC-2.58□□□□□ -2.82
O00370 RNU6-936P-201ENST00000384005 107 ntBASIC-2.58□□□□□ -2.82
O00370 RNU6-1008P-201ENST00000384160 104 ntBASIC-2.58□□□□□ -2.82
O00370 SNORD115.2-201ENST00000391126 59 ntBASIC-2.58□□□□□ -2.82
O00370 RNU6-1169P-201ENST00000363537 103 ntBASIC-2.59□□□□□ -2.82
O00370 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.6□□□□□ -2.83
O00370 RNU6-345P-201ENST00000517001 107 ntBASIC-2.6□□□□□ -2.83
O00370 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.61□□□□□ -2.83
O00370 MIR3139-201ENST00000579145 76 ntBASIC-2.63□□□□□ -2.83
O00370 RNU6-753P-201ENST00000363926 107 ntBASIC-2.64□□□□□ -2.83
O00370 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.65□□□□□ -2.83
O00370 RNU6-614P-201ENST00000384369 107 ntBASIC-2.66□□□□□ -2.84
O00370 RNU6-1326P-201ENST00000391262 107 ntBASIC-2.66□□□□□ -2.84
O00370 MIR548H4-201ENST00000408689 111 ntBASIC-2.66□□□□□ -2.84
O00370 RNY4-201ENST00000516507 96 ntBASIC-2.66□□□□□ -2.84
O00370 U6.59-201ENST00000615686 107 ntBASIC-2.66□□□□□ -2.84
O00370 MIR4748-201ENST00000578076 82 ntBASIC-2.67□□□□□ -2.84
O00370 RNU6-838P-201ENST00000363399 108 ntBASIC-2.68□□□□□ -2.84
O00370 RNY4P9-201ENST00000363194 97 ntBASIC-2.69□□□□□ -2.84
O00370 RNA5SP93-201ENST00000362525 114 ntBASIC-2.7□□□□□ -2.84
O00370 Y_RNA.206-201ENST00000364136 102 ntBASIC-2.7□□□□□ -2.84
O00370 RNU6-808P-201ENST00000391233 108 ntBASIC-2.7□□□□□ -2.84
O00370 Y_RNA.134-201ENST00000363435 105 ntBASIC-2.72□□□□□ -2.84
O00370 MT-TM-201ENST00000387377 68 ntBASIC-2.72□□□□□ -2.84
O00370 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.72□□□□□ -2.84
O00370 RNU6-788P-201ENST00000390967 104 ntBASIC-2.72□□□□□ -2.84
O00370 Y_RNA.345-201ENST00000365384 92 ntBASIC-2.73□□□□□ -2.85
O00370 RNU6-141P-201ENST00000410499 105 ntBASIC-2.74□□□□□ -2.85
O00370 Y_RNA.260-201ENST00000364628 101 ntBASIC-2.75□□□□□ -2.85
O00370 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.75□□□□□ -2.85
O00370 Y_RNA.63-201ENST00000362841 102 ntBASIC-2.77□□□□□ -2.85
O00370 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.77□□□□□ -2.85
O00370 RNU6-930P-201ENST00000390938 100 ntBASIC-2.79□□□□□ -2.86
O00370 RNU6-836P-201ENST00000362920 107 ntBASIC-2.8□□□□□ -2.86
O00370 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.81□□□□□ -2.86
O00370 RNU6-986P-201ENST00000363133 102 ntBASIC-2.82□□□□□ -2.86
O00370 RNA5SP224-201ENST00000365069 126 ntBASIC-2.83□□□□□ -2.86
O00370 SNORD45C-201ENST00000383893 79 ntBASIC-2.84□□□□□ -2.86
O00370 Y_RNA.519-201ENST00000384553 102 ntBASIC-2.85□□□□□ -2.87
O00370 SNX3P1Y-201ENST00000615757 176 ntBASIC-2.85□□□□□ -2.87
O00370 MTND4LP19-201ENST00000403051 166 ntBASIC-2.87□□□□□ -2.87
O00370 MIR656-201ENST00000385224 78 ntBASIC-2.89□□□□□ -2.87
O00370 Y_RNA.335-201ENST00000365299 96 ntBASIC-2.91□□□□□ -2.88
O00370 RNU6-1340P-201ENST00000384438 107 ntBASIC-2.92□□□□□ -2.88
O00370 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.93□□□□□ -2.88
O00370 MIR548F3-201ENST00000408509 87 ntBASIC-2.94□□□□□ -2.88
O00370 RNU6-59P-201ENST00000384787 107 ntBASIC-2.96□□□□□ -2.88
O00370 MIR545-201ENST00000385085 106 ntBASIC-2.98□□□□□ -2.89
O00370 Y_RNA.186-201ENST00000363899 92 ntBASIC-3□□□□□ -2.89
O00370 AL731768.1-201ENST00000603124 139 ntBASIC-3.02□□□□□ -2.89
O00370 RNU6-737P-201ENST00000365370 107 ntBASIC-3.03□□□□□ -2.89
O00370 DLEU2_4.2-201ENST00000616613 58 ntBASIC-3.07□□□□□ -2.9
O00370 Y_RNA.59-201ENST00000362828 102 ntBASIC-3.09□□□□□ -2.9
O00370 RNU6-1277P-201ENST00000364561 107 ntBASIC-3.09□□□□□ -2.9
O00370 RNU6-230P-201ENST00000362457 104 ntBASIC-3.11□□□□□ -2.91
O00370 RNU6-1191P-201ENST00000516799 107 ntBASIC-3.12□□□□□ -2.91
O00370 Y_RNA.397-201ENST00000383950 98 ntBASIC-3.13□□□□□ -2.91
O00370 RNY4P25-201ENST00000459254 96 ntBASIC-3.15□□□□□ -2.91
O00370 RNU6-854P-201ENST00000364036 107 ntBASIC-3.18□□□□□ -2.92
O00370 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-3.18□□□□□ -2.92
O00370 MIRLET7A3-201ENST00000362116 74 ntBASIC-3.2□□□□□ -2.92
O00370 Y_RNA.663-201ENST00000516043 101 ntBASIC-3.22□□□□□ -2.92
O00370 Y_RNA.612-201ENST00000410717 95 ntBASIC-3.24□□□□□ -2.93
O00370 RNU6-422P-201ENST00000384632 107 ntBASIC-3.25□□□□□ -2.93
O00370 MIR5693-201ENST00000577722 73 ntBASIC-3.28□□□□□ -2.93
O00370 AL359920.1-201ENST00000618332 176 ntBASIC-3.29□□□□□ -2.94
O00370 Y_RNA.652-201ENST00000458902 102 ntBASIC-3.34□□□□□ -2.94
O00370 Y_RNA.406-201ENST00000383984 100 ntBASIC-3.36□□□□□ -2.95
O00370 RNU6-1121P-201ENST00000516802 109 ntBASIC-3.36□□□□□ -2.95
O00370 Y_RNA.137-201ENST00000363455 112 ntBASIC-3.37□□□□□ -2.95
O00370 Y_RNA.566-201ENST00000384735 101 ntBASIC-3.37□□□□□ -2.95
O00370 RNU6-987P-201ENST00000384759 104 ntBASIC-3.37□□□□□ -2.95
O00370 RNU4-37P-201ENST00000410214 84 ntBASIC-3.37□□□□□ -2.95
O00370 Y_RNA.266-201ENST00000364678 96 ntBASIC-3.38□□□□□ -2.95
O00370 Y_RNA.79-201ENST00000362992 113 ntBASIC-3.41□□□□□ -2.96
O00370 RNU6-1161P-201ENST00000516176 102 ntBASIC-3.41□□□□□ -2.96
O00370 MIR124-1-201ENST00000385275 85 ntBASIC-3.42□□□□□ -2.96
O00370 Y_RNA.830-201ENST00000628531 96 ntBASIC-3.42□□□□□ -2.96
O00370 U6.103-201ENST00000637085 61 ntBASIC-3.44□□□□□ -2.96
O00370 RNU6-1044P-201ENST00000384755 107 ntBASIC-3.46□□□□□ -2.96
O00370 SNORD115-45-201ENST00000391078 81 ntBASIC-3.47□□□□□ -2.96
O00370 SNORD111B-201ENST00000408587 80 ntBASIC-3.49□□□□□ -2.97
O00370 Y_RNA.658-201ENST00000515990 97 ntBASIC-3.5□□□□□ -2.97
O00370 RNU6-803P-201ENST00000516034 102 ntBASIC-3.54□□□□□ -2.98
O00370 MIR548AH-201ENST00000637109 76 ntBASIC-3.56□□□□□ -2.98
O00370 RNU6-1043P-201ENST00000410355 99 ntBASIC-3.59□□□□□ -2.98
O00370 SNORD114-13-201ENST00000364377 74 ntBASIC-3.64□□□□□ -2.99
O00370 RNU6-485P-201ENST00000363475 107 ntBASIC-3.69□□□□□ -3
O00370 MIR509-1-201ENST00000385265 94 ntBASIC-3.71□□□□□ -3
O00370 MIR509-2-201ENST00000390724 91 ntBASIC-3.71□□□□□ -3
O00370 RNU6-724P-201ENST00000390958 105 ntBASIC-3.77□□□□□ -3.01
O00370 Y_RNA.511-201ENST00000384514 103 ntBASIC-3.79□□□□□ -3.02
Retrieved 100 of 98,524 protein–RNA pairs in 178.1 ms