Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-0.77□□□□□ -2.53
SEC61A2Q9H9S3 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.78□□□□□ -2.53
SEC61A2Q9H9S3 MIR4499-201ENST00000584834 69 ntBASIC-0.78□□□□□ -2.53
SEC61A2Q9H9S3 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.79□□□□□ -2.54
SEC61A2Q9H9S3 MT-TQ-201ENST00000387372 72 ntBASIC-0.8□□□□□ -2.54
SEC61A2Q9H9S3 Y_RNA.129-201ENST00000363392 110 ntBASIC-0.81□□□□□ -2.54
SEC61A2Q9H9S3 snoU13.19-201ENST00000459148 104 ntBASIC-0.81□□□□□ -2.54
SEC61A2Q9H9S3 RNU6-68P-201ENST00000516576 104 ntBASIC-0.81□□□□□ -2.54
SEC61A2Q9H9S3 SNORD83B-201ENST00000386745 93 ntBASIC-0.82□□□□□ -2.54
SEC61A2Q9H9S3 Y_RNA.206-201ENST00000364136 102 ntBASIC-0.83□□□□□ -2.54
SEC61A2Q9H9S3 Y_RNA.382-201ENST00000365672 114 ntBASIC-0.83□□□□□ -2.54
SEC61A2Q9H9S3 RNU4-63P-201ENST00000411313 118 ntBASIC-0.84□□□□□ -2.54
SEC61A2Q9H9S3 U6.103-201ENST00000637085 61 ntBASIC-0.84□□□□□ -2.54
SEC61A2Q9H9S3 MIR379-201ENST00000362218 67 ntBASIC-0.85□□□□□ -2.55
SEC61A2Q9H9S3 SNORD115.2-201ENST00000391126 59 ntBASIC-0.85□□□□□ -2.55
SEC61A2Q9H9S3 MIR8485-201ENST00000401372 91 ntBASIC-0.86□□□□□ -2.55
SEC61A2Q9H9S3 MIR548AJ2-201ENST00000408539 92 ntBASIC-0.86□□□□□ -2.55
SEC61A2Q9H9S3 HAR1A.1-201ENST00000459583 118 ntBASIC-0.86□□□□□ -2.55
SEC61A2Q9H9S3 RNU6-724P-201ENST00000390958 105 ntBASIC-0.87□□□□□ -2.55
SEC61A2Q9H9S3 RNU6-912P-201ENST00000363800 104 ntBASIC-0.88□□□□□ -2.55
SEC61A2Q9H9S3 RNU6-30P-201ENST00000384561 107 ntBASIC-0.89□□□□□ -2.55
SEC61A2Q9H9S3 RNU6-400P-201ENST00000391173 106 ntBASIC-0.89□□□□□ -2.55
SEC61A2Q9H9S3 MIR548AX-201ENST00000580117 73 ntBASIC-0.91□□□□□ -2.56
SEC61A2Q9H9S3 Y_RNA.134-201ENST00000363435 105 ntBASIC-0.92□□□□□ -2.56
SEC61A2Q9H9S3 SNORD19B.1-201ENST00000630615 80 ntBASIC-0.92□□□□□ -2.56
SEC61A2Q9H9S3 RNU6-1034P-201ENST00000365335 101 ntBASIC-0.93□□□□□ -2.56
SEC61A2Q9H9S3 MIR3681-201ENST00000580089 72 ntBASIC-0.93□□□□□ -2.56
SEC61A2Q9H9S3 RNA5SP67-201ENST00000516422 131 ntBASIC-0.98□□□□□ -2.57
SEC61A2Q9H9S3 RNU6-1169P-201ENST00000363537 103 ntBASIC-1□□□□□ -2.57
SEC61A2Q9H9S3 Y_RNA.449-201ENST00000384187 102 ntBASIC-1□□□□□ -2.57
SEC61A2Q9H9S3 RNU6-1324P-201ENST00000384222 107 ntBASIC-1□□□□□ -2.57
SEC61A2Q9H9S3 MIR3123-201ENST00000583417 75 ntBASIC-1□□□□□ -2.57
SEC61A2Q9H9S3 MIR548H1-201ENST00000408610 102 ntBASIC-1.01□□□□□ -2.57
SEC61A2Q9H9S3 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.01□□□□□ -2.57
SEC61A2Q9H9S3 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.02□□□□□ -2.57
SEC61A2Q9H9S3 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-1.03□□□□□ -2.57
SEC61A2Q9H9S3 MIR378F-201ENST00000578143 78 ntBASIC-1.04□□□□□ -2.58
SEC61A2Q9H9S3 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.04□□□□□ -2.58
SEC61A2Q9H9S3 MIR6502-201ENST00000617296 76 ntBASIC-1.04□□□□□ -2.58
SEC61A2Q9H9S3 RNU6-836P-201ENST00000362920 107 ntBASIC-1.05□□□□□ -2.58
SEC61A2Q9H9S3 snoU13.10-201ENST00000459301 103 ntBASIC-1.05□□□□□ -2.58
SEC61A2Q9H9S3 FTX_4.1-201ENST00000616291 147 ntBASIC-1.05□□□□□ -2.58
SEC61A2Q9H9S3 MIR1254-1-201ENST00000408257 97 ntBASIC-1.06□□□□□ -2.58
SEC61A2Q9H9S3 AC138207.3-201ENST00000585289 166 ntBASIC-1.06□□□□□ -2.58
SEC61A2Q9H9S3 MIR4520-1-201ENST00000582609 70 ntBASIC-1.07□□□□□ -2.58
SEC61A2Q9H9S3 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.07□□□□□ -2.58
SEC61A2Q9H9S3 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.08□□□□□ -2.58
SEC61A2Q9H9S3 Y_RNA.260-201ENST00000364628 101 ntBASIC-1.08□□□□□ -2.58
SEC61A2Q9H9S3 SNORD111B-201ENST00000408587 80 ntBASIC-1.08□□□□□ -2.58
SEC61A2Q9H9S3 RNA5SP224-201ENST00000365069 126 ntBASIC-1.09□□□□□ -2.58
SEC61A2Q9H9S3 MIR548W-201ENST00000581970 74 ntBASIC-1.1□□□□□ -2.59
SEC61A2Q9H9S3 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.11□□□□□ -2.59
SEC61A2Q9H9S3 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.11□□□□□ -2.59
SEC61A2Q9H9S3 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.12□□□□□ -2.59
SEC61A2Q9H9S3 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.12□□□□□ -2.59
SEC61A2Q9H9S3 MIR409-201ENST00000362237 79 ntBASIC-1.13□□□□□ -2.59
SEC61A2Q9H9S3 RNU6-841P-201ENST00000383872 107 ntBASIC-1.16□□□□□ -2.6
SEC61A2Q9H9S3 SNORD45C-201ENST00000383893 79 ntBASIC-1.16□□□□□ -2.6
SEC61A2Q9H9S3 MIR4306-201ENST00000583390 91 ntBASIC-1.16□□□□□ -2.6
SEC61A2Q9H9S3 SNORD113-3-201ENST00000364830 72 ntBASIC-1.17□□□□□ -2.6
SEC61A2Q9H9S3 SCARNA17-201ENST00000516183 144 ntBASIC-1.17□□□□□ -2.6
SEC61A2Q9H9S3 RNU6-345P-201ENST00000517001 107 ntBASIC-1.17□□□□□ -2.6
SEC61A2Q9H9S3 MIR548AM-201ENST00000584298 74 ntBASIC-1.18□□□□□ -2.6
SEC61A2Q9H9S3 Y_RNA.335-201ENST00000365299 96 ntBASIC-1.21□□□□□ -2.6
SEC61A2Q9H9S3 MIR587-201ENST00000384845 96 ntBASIC-1.21□□□□□ -2.6
SEC61A2Q9H9S3 MIR487B-201ENST00000385021 84 ntBASIC-1.21□□□□□ -2.6
SEC61A2Q9H9S3 RNU6-485P-201ENST00000363475 107 ntBASIC-1.22□□□□□ -2.6
SEC61A2Q9H9S3 MIR6738-201ENST00000619620 64 ntBASIC-1.22□□□□□ -2.6
SEC61A2Q9H9S3 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.23□□□□□ -2.61
SEC61A2Q9H9S3 RNA5SP266-201ENST00000410273 108 ntBASIC-1.23□□□□□ -2.61
SEC61A2Q9H9S3 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.24□□□□□ -2.61
SEC61A2Q9H9S3 RNU6-10P-201ENST00000384036 107 ntBASIC-1.26□□□□□ -2.61
SEC61A2Q9H9S3 MIR656-201ENST00000385224 78 ntBASIC-1.26□□□□□ -2.61
SEC61A2Q9H9S3 RNU6-706P-201ENST00000517229 104 ntBASIC-1.26□□□□□ -2.61
SEC61A2Q9H9S3 AL627230.5-201ENST00000619807 58 ntBASIC-1.26□□□□□ -2.61
SEC61A2Q9H9S3 RNA5SP86-201ENST00000390869 98 ntBASIC-1.28□□□□□ -2.61
SEC61A2Q9H9S3 AC097484.2-201ENST00000509147 251 ntBASIC-1.28□□□□□ -2.61
SEC61A2Q9H9S3 MIR5591-201ENST00000578248 65 ntBASIC-1.28□□□□□ -2.61
SEC61A2Q9H9S3 MIR4324-201ENST00000584846 72 ntBASIC-1.28□□□□□ -2.61
SEC61A2Q9H9S3 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.31□□□□□ -2.62
SEC61A2Q9H9S3 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.31□□□□□ -2.62
SEC61A2Q9H9S3 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.31□□□□□ -2.62
SEC61A2Q9H9S3 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.31□□□□□ -2.62
SEC61A2Q9H9S3 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.31□□□□□ -2.62
SEC61A2Q9H9S3 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.31□□□□□ -2.62
SEC61A2Q9H9S3 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.31□□□□□ -2.62
SEC61A2Q9H9S3 RNA5SP331-201ENST00000364986 107 ntBASIC-1.32□□□□□ -2.62
SEC61A2Q9H9S3 HLA-S-202ENST00000425174 53 ntBASIC-1.32□□□□□ -2.62
SEC61A2Q9H9S3 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.33□□□□□ -2.62
SEC61A2Q9H9S3 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.34□□□□□ -2.62
SEC61A2Q9H9S3 RNU6-1340P-201ENST00000384438 107 ntBASIC-1.34□□□□□ -2.62
SEC61A2Q9H9S3 MIR4770-201ENST00000579149 58 ntBASIC-1.34□□□□□ -2.62
SEC61A2Q9H9S3 RNU6-133P-201ENST00000383989 107 ntBASIC-1.35□□□□□ -2.63
SEC61A2Q9H9S3 Y_RNA.63-201ENST00000362841 102 ntBASIC-1.37□□□□□ -2.63
SEC61A2Q9H9S3 SNX3P1X-201ENST00000414887 175 ntBASIC-1.37□□□□□ -2.63
SEC61A2Q9H9S3 MIR4320-201ENST00000636981 65 ntBASIC-1.37□□□□□ -2.63
SEC61A2Q9H9S3 Y_RNA.406-201ENST00000383984 100 ntBASIC-1.38□□□□□ -2.63
SEC61A2Q9H9S3 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.45□□□□□ -2.64
SEC61A2Q9H9S3 RNU6-983P-201ENST00000516004 103 ntBASIC-1.45□□□□□ -2.64
SEC61A2Q9H9S3 MIR3165-201ENST00000579874 75 ntBASIC-1.45□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 8.1 ms