Protein–RNA interactions for Protein: Q9H4L4

SENP3, Sentrin-specific protease 3, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3Q9H4L4 AC023932.2-201ENST00000603176 175 ntBASIC0.68□□□□□ -2.3
SENP3Q9H4L4 SNORD64-201ENST00000386683 67 ntBASIC0.66□□□□□ -2.3
SENP3Q9H4L4 IGLVI-20-201ENST00000519296 130 ntBASIC0.64□□□□□ -2.31
SENP3Q9H4L4 MIR3666-201ENST00000607845 111 ntBASIC0.63□□□□□ -2.31
SENP3Q9H4L4 MIR6718-201ENST00000616153 80 ntBASIC0.63□□□□□ -2.31
SENP3Q9H4L4 MIR6874-201ENST00000635894 71 ntBASIC0.63□□□□□ -2.31
SENP3Q9H4L4 RNA5SP134-201ENST00000516492 96 ntBASIC0.6□□□□□ -2.31
SENP3Q9H4L4 MIR409-201ENST00000362237 79 ntBASIC0.59□□□□□ -2.31
SENP3Q9H4L4 RNA5SP368-201ENST00000364298 116 ntBASIC0.58□□□□□ -2.32
SENP3Q9H4L4 MIR3123-201ENST00000583417 75 ntBASIC0.57□□□□□ -2.32
SENP3Q9H4L4 SNORA18.1-201ENST00000363418 128 ntBASIC0.56□□□□□ -2.32
SENP3Q9H4L4 RNU6-400P-201ENST00000391173 106 ntBASIC0.56□□□□□ -2.32
SENP3Q9H4L4 RNA5SP25-201ENST00000410815 110 ntBASIC0.56□□□□□ -2.32
SENP3Q9H4L4 RNU7-134P-201ENST00000458997 64 ntBASIC0.56□□□□□ -2.32
SENP3Q9H4L4 snoU83B.1-201ENST00000517136 88 ntBASIC0.54□□□□□ -2.32
SENP3Q9H4L4 MIR5190-201ENST00000581537 80 ntBASIC0.54□□□□□ -2.32
SENP3Q9H4L4 Y_RNA.185-201ENST00000363894 100 ntBASIC0.53□□□□□ -2.32
SENP3Q9H4L4 AC091912.2-201ENST00000624798 167 ntBASIC0.51□□□□□ -2.33
SENP3Q9H4L4 RNU6-758P-201ENST00000516292 89 ntBASIC0.47□□□□□ -2.33
SENP3Q9H4L4 MIR4493-201ENST00000584016 73 ntBASIC0.47□□□□□ -2.33
SENP3Q9H4L4 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.45□□□□□ -2.34
SENP3Q9H4L4 RNA5SP300-201ENST00000391197 107 ntBASIC0.44□□□□□ -2.34
SENP3Q9H4L4 MIR382-201ENST00000637119 76 ntBASIC0.44□□□□□ -2.34
SENP3Q9H4L4 RNA5SP266-201ENST00000410273 108 ntBASIC0.43□□□□□ -2.34
SENP3Q9H4L4 ULK3-223ENST00000631115 126 ntTSL 5 BASIC0.43□□□□□ -2.34
SENP3Q9H4L4 MIRLET7A2-201ENST00000362105 72 ntBASIC0.42□□□□□ -2.34
SENP3Q9H4L4 SNORA50A-201ENST00000384225 134 ntBASIC0.42□□□□□ -2.34
SENP3Q9H4L4 RNU6-576P-201ENST00000390854 102 ntBASIC0.42□□□□□ -2.34
SENP3Q9H4L4 RNU6-737P-201ENST00000365370 107 ntBASIC0.41□□□□□ -2.34
SENP3Q9H4L4 MIR4290-201ENST00000583807 95 ntBASIC0.39□□□□□ -2.35
SENP3Q9H4L4 AP001180.6-201ENST00000584918 159 ntBASIC0.39□□□□□ -2.35
SENP3Q9H4L4 SNORD95.1-201ENST00000364099 68 ntBASIC0.35□□□□□ -2.35
SENP3Q9H4L4 AC097484.2-201ENST00000509147 251 ntBASIC0.35□□□□□ -2.35
SENP3Q9H4L4 SNORD114-31-201ENST00000363219 75 ntBASIC0.34□□□□□ -2.36
SENP3Q9H4L4 MIR124-1-201ENST00000385275 85 ntBASIC0.34□□□□□ -2.36
SENP3Q9H4L4 SNORD4A-201ENST00000459174 72 ntBASIC0.34□□□□□ -2.36
SENP3Q9H4L4 SNORD114-15-201ENST00000364687 72 ntBASIC0.33□□□□□ -2.36
SENP3Q9H4L4 Y_RNA.647-201ENST00000459194 112 ntBASIC0.33□□□□□ -2.36
SENP3Q9H4L4 Y_RNA.640-201ENST00000459296 112 ntBASIC0.33□□□□□ -2.36
SENP3Q9H4L4 Y_RNA.803-201ENST00000614432 112 ntBASIC0.33□□□□□ -2.36
SENP3Q9H4L4 Y_RNA.815-201ENST00000616655 112 ntBASIC0.33□□□□□ -2.36
SENP3Q9H4L4 Y_RNA.795-201ENST00000619475 112 ntBASIC0.33□□□□□ -2.36
SENP3Q9H4L4 Y_RNA.827-201ENST00000638104 112 ntBASIC0.33□□□□□ -2.36
SENP3Q9H4L4 MIR604-201ENST00000384880 94 ntBASIC0.32□□□□□ -2.36
SENP3Q9H4L4 Y_RNA.457-201ENST00000384237 111 ntBASIC0.3□□□□□ -2.36
SENP3Q9H4L4 SNORA3B-201ENST00000391305 131 ntBASIC0.3□□□□□ -2.36
SENP3Q9H4L4 MIR1295B-201ENST00000636144 60 ntBASIC0.3□□□□□ -2.36
SENP3Q9H4L4 MIR1295A-201ENST00000408463 79 ntBASIC0.27□□□□□ -2.37
SENP3Q9H4L4 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
SENP3Q9H4L4 SNORD114-25-201ENST00000363742 72 ntBASIC0.23□□□□□ -2.37
SENP3Q9H4L4 MIR101-1-201ENST00000362265 75 ntBASIC0.2□□□□□ -2.38
SENP3Q9H4L4 MIR4723-201ENST00000585070 81 ntBASIC0.15□□□□□ -2.39
SENP3Q9H4L4 MIR4768-201ENST00000585270 74 ntBASIC0.14□□□□□ -2.39
SENP3Q9H4L4 MIR4667-201ENST00000578933 66 ntBASIC0.13□□□□□ -2.39
SENP3Q9H4L4 Y_RNA.175-201ENST00000363794 111 ntBASIC0.12□□□□□ -2.39
SENP3Q9H4L4 MIR4436A-201ENST00000585278 85 ntBASIC0.12□□□□□ -2.39
SENP3Q9H4L4 MIR371B-201ENST00000638082 66 ntBASIC0.12□□□□□ -2.39
SENP3Q9H4L4 SNORD114-16-201ENST00000363044 70 ntBASIC0.11□□□□□ -2.39
SENP3Q9H4L4 RNU6-841P-201ENST00000383872 107 ntBASIC0.11□□□□□ -2.39
SENP3Q9H4L4 Y_RNA.696-201ENST00000516725 107 ntBASIC0.09□□□□□ -2.4
SENP3Q9H4L4 MIR214-201ENST00000385214 110 ntBASIC0.07□□□□□ -2.4
SENP3Q9H4L4 SNORD114-14-201ENST00000362723 75 ntBASIC0.05□□□□□ -2.4
SENP3Q9H4L4 Y_RNA.610-201ENST00000410681 103 ntBASIC0.05□□□□□ -2.4
SENP3Q9H4L4 MIR548AX-201ENST00000580117 73 ntBASIC0.05□□□□□ -2.4
SENP3Q9H4L4 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
SENP3Q9H4L4 MIR548AH-201ENST00000637109 76 ntBASIC0.03□□□□□ -2.4
SENP3Q9H4L4 RNU6-1161P-201ENST00000516176 102 ntBASIC0.02□□□□□ -2.41
SENP3Q9H4L4 MIR548AM-201ENST00000584298 74 ntBASIC0.02□□□□□ -2.41
SENP3Q9H4L4 SNX3P1X-201ENST00000414887 175 ntBASIC-0.04□□□□□ -2.42
SENP3Q9H4L4 SNORD114-28-201ENST00000363610 72 ntBASIC-0.05□□□□□ -2.42
SENP3Q9H4L4 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.05□□□□□ -2.42
SENP3Q9H4L4 RPS29P8-201ENST00000445109 171 ntBASIC-0.06□□□□□ -2.42
SENP3Q9H4L4 Y_RNA.103-201ENST00000363171 102 ntBASIC-0.07□□□□□ -2.42
SENP3Q9H4L4 MIR224-201ENST00000384889 81 ntBASIC-0.12□□□□□ -2.43
SENP3Q9H4L4 RNA5SP451-201ENST00000410588 110 ntBASIC-0.15□□□□□ -2.43
SENP3Q9H4L4 MIR198-201ENST00000637333 62 ntBASIC-0.16□□□□□ -2.44
SENP3Q9H4L4 MIR196A2-201ENST00000385189 110 ntBASIC-0.18□□□□□ -2.44
SENP3Q9H4L4 Y_RNA.137-201ENST00000363455 112 ntBASIC-0.2□□□□□ -2.44
SENP3Q9H4L4 MIR8485-201ENST00000401372 91 ntBASIC-0.2□□□□□ -2.44
SENP3Q9H4L4 MIR8064-201ENST00000612863 90 ntBASIC-0.21□□□□□ -2.44
SENP3Q9H4L4 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.22□□□□□ -2.44
SENP3Q9H4L4 SNORD126-201ENST00000459475 77 ntBASIC-0.23□□□□□ -2.45
SENP3Q9H4L4 Y_RNA.663-201ENST00000516043 101 ntBASIC-0.23□□□□□ -2.45
SENP3Q9H4L4 RNU6-320P-201ENST00000516511 106 ntBASIC-0.23□□□□□ -2.45
SENP3Q9H4L4 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.24□□□□□ -2.45
SENP3Q9H4L4 RNA5SP275-201ENST00000363936 118 ntBASIC-0.26□□□□□ -2.45
SENP3Q9H4L4 RNU4-63P-201ENST00000411313 118 ntBASIC-0.28□□□□□ -2.45
SENP3Q9H4L4 SNORA32.3-201ENST00000384772 121 ntBASIC-0.3□□□□□ -2.46
SENP3Q9H4L4 MIR601-201ENST00000385256 79 ntBASIC-0.31□□□□□ -2.46
SENP3Q9H4L4 U4.2-201ENST00000618561 85 ntBASIC-0.31□□□□□ -2.46
SENP3Q9H4L4 SNORD14C-201ENST00000365382 88 ntBASIC-0.32□□□□□ -2.46
SENP3Q9H4L4 MIR548AZ-201ENST00000616567 95 ntBASIC-0.32□□□□□ -2.46
SENP3Q9H4L4 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.33□□□□□ -2.46
SENP3Q9H4L4 MIR3681-201ENST00000580089 72 ntBASIC-0.35□□□□□ -2.47
SENP3Q9H4L4 AL731768.1-201ENST00000603124 139 ntBASIC-0.35□□□□□ -2.47
SENP3Q9H4L4 MIR6502-201ENST00000617296 76 ntBASIC-0.36□□□□□ -2.47
SENP3Q9H4L4 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.38□□□□□ -2.47
SENP3Q9H4L4 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.38□□□□□ -2.47
SENP3Q9H4L4 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.38□□□□□ -2.47
SENP3Q9H4L4 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.38□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms