Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 RNU6-1011P-201ENST00000384668 107 ntBASIC-4.82□□□□□ -3.18
CCDC42Q96M95 MIR4712-201ENST00000583750 82 ntBASIC-4.82□□□□□ -3.18
CCDC42Q96M95 RNU6-959P-201ENST00000384671 107 ntBASIC-4.83□□□□□ -3.18
CCDC42Q96M95 RNU6-1124P-201ENST00000384169 107 ntBASIC-4.84□□□□□ -3.18
CCDC42Q96M95 MIR5588-201ENST00000581890 63 ntBASIC-4.84□□□□□ -3.18
CCDC42Q96M95 SNORA25.5-201ENST00000363782 126 ntBASIC-4.85□□□□□ -3.19
CCDC42Q96M95 AP001094.1-201ENST00000579805 193 ntBASIC-4.85□□□□□ -3.19
CCDC42Q96M95 MIR1245B-201ENST00000636115 69 ntBASIC-4.85□□□□□ -3.19
CCDC42Q96M95 MIR3134-201ENST00000579433 74 ntBASIC-4.86□□□□□ -3.19
CCDC42Q96M95 SCARNA15.1-201ENST00000516384 125 ntBASIC-4.87□□□□□ -3.19
CCDC42Q96M95 IGLL4P-201ENST00000614590 133 ntBASIC-4.87□□□□□ -3.19
CCDC42Q96M95 Y_RNA.830-201ENST00000628531 96 ntBASIC-4.87□□□□□ -3.19
CCDC42Q96M95 RNU6-1015P-201ENST00000517121 99 ntBASIC-4.88□□□□□ -3.19
CCDC42Q96M95 MIRLET7A3-201ENST00000362116 74 ntBASIC-4.89□□□□□ -3.19
CCDC42Q96M95 Y_RNA.63-201ENST00000362841 102 ntBASIC-4.89□□□□□ -3.19
CCDC42Q96M95 Y_RNA.73-201ENST00000362910 113 ntBASIC-4.89□□□□□ -3.19
CCDC42Q96M95 Y_RNA.788-201ENST00000622394 112 ntBASIC-4.89□□□□□ -3.19
CCDC42Q96M95 RNU6-979P-201ENST00000383896 107 ntBASIC-4.9□□□□□ -3.19
CCDC42Q96M95 RNU6-800P-201ENST00000384473 103 ntBASIC-4.9□□□□□ -3.19
CCDC42Q96M95 Y_RNA.593-201ENST00000410292 98 ntBASIC-4.9□□□□□ -3.19
CCDC42Q96M95 Y_RNA.79-201ENST00000362992 113 ntBASIC-4.91□□□□□ -3.2
CCDC42Q96M95 RNU6-1134P-201ENST00000365156 101 ntBASIC-4.91□□□□□ -3.2
CCDC42Q96M95 AL365222.1-201ENST00000614661 98 ntBASIC-4.91□□□□□ -3.2
CCDC42Q96M95 Y_RNA.134-201ENST00000363435 105 ntBASIC-4.92□□□□□ -3.2
CCDC42Q96M95 RNU6-419P-201ENST00000517030 63 ntBASIC-4.92□□□□□ -3.2
CCDC42Q96M95 RNU6-640P-201ENST00000363693 105 ntBASIC-4.93□□□□□ -3.2
CCDC42Q96M95 RNU6-742P-201ENST00000365289 107 ntBASIC-4.93□□□□□ -3.2
CCDC42Q96M95 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-4.93□□□□□ -3.2
CCDC42Q96M95 Y_RNA.511-201ENST00000384514 103 ntBASIC-4.95□□□□□ -3.2
CCDC42Q96M95 RNU6-822P-201ENST00000362707 106 ntBASIC-4.96□□□□□ -3.2
CCDC42Q96M95 RNU7-171P-201ENST00000459581 62 ntBASIC-4.96□□□□□ -3.2
CCDC42Q96M95 RNU6-411P-201ENST00000384451 107 ntBASIC-4.97□□□□□ -3.21
CCDC42Q96M95 RNU6-1169P-201ENST00000363537 103 ntBASIC-5□□□□□ -3.21
CCDC42Q96M95 Y_RNA.703-201ENST00000516846 111 ntBASIC-5□□□□□ -3.21
CCDC42Q96M95 Y_RNA.266-201ENST00000364678 96 ntBASIC-5.01□□□□□ -3.21
CCDC42Q96M95 MIR509-1-201ENST00000385265 94 ntBASIC-5.01□□□□□ -3.21
CCDC42Q96M95 MIR509-2-201ENST00000390724 91 ntBASIC-5.01□□□□□ -3.21
CCDC42Q96M95 Y_RNA.94-201ENST00000363068 106 ntBASIC-5.02□□□□□ -3.21
CCDC42Q96M95 Y_RNA.612-201ENST00000410717 95 ntBASIC-5.02□□□□□ -3.21
CCDC42Q96M95 RNU6-32P-201ENST00000383948 107 ntBASIC-5.03□□□□□ -3.21
CCDC42Q96M95 RNU6-13P-201ENST00000384248 107 ntBASIC-5.03□□□□□ -3.21
CCDC42Q96M95 RNU6-12P-201ENST00000384604 107 ntBASIC-5.03□□□□□ -3.21
CCDC42Q96M95 RNU6-41P-201ENST00000384741 107 ntBASIC-5.03□□□□□ -3.21
CCDC42Q96M95 RNU6-663P-201ENST00000391105 106 ntBASIC-5.03□□□□□ -3.21
CCDC42Q96M95 SNORA25.4-201ENST00000363666 124 ntBASIC-5.05□□□□□ -3.22
CCDC42Q96M95 MIR3133-201ENST00000583157 78 ntBASIC-5.05□□□□□ -3.22
CCDC42Q96M95 RNU6-634P-201ENST00000459134 106 ntBASIC-5.07□□□□□ -3.22
CCDC42Q96M95 RNU6-940P-201ENST00000363433 104 ntBASIC-5.08□□□□□ -3.22
CCDC42Q96M95 RNU6-81P-201ENST00000365608 104 ntBASIC-5.08□□□□□ -3.22
CCDC42Q96M95 RNU6-987P-201ENST00000384759 104 ntBASIC-5.08□□□□□ -3.22
CCDC42Q96M95 RNU6-1168P-201ENST00000390831 104 ntBASIC-5.09□□□□□ -3.22
CCDC42Q96M95 RNU6-1044P-201ENST00000384755 107 ntBASIC-5.1□□□□□ -3.23
CCDC42Q96M95 Y_RNA.43-201ENST00000362670 111 ntBASIC-5.11□□□□□ -3.23
CCDC42Q96M95 AL359920.1-201ENST00000618332 176 ntBASIC-5.11□□□□□ -3.23
CCDC42Q96M95 AC062037.1-201ENST00000605302 128 ntBASIC-5.12□□□□□ -3.23
CCDC42Q96M95 RNA5SP106-201ENST00000517274 100 ntBASIC-5.13□□□□□ -3.23
CCDC42Q96M95 MIR3938-201ENST00000582157 103 ntBASIC-5.13□□□□□ -3.23
CCDC42Q96M95 Y_RNA.382-201ENST00000365672 114 ntBASIC-5.16□□□□□ -3.24
CCDC42Q96M95 Y_RNA.652-201ENST00000458902 102 ntBASIC-5.18□□□□□ -3.24
CCDC42Q96M95 AC139453.2-201ENST00000487255 133 ntBASIC-5.18□□□□□ -3.24
CCDC42Q96M95 U7.4-201ENST00000614961 63 ntBASIC-5.19□□□□□ -3.24
CCDC42Q96M95 RNU6-22P-201ENST00000384355 107 ntBASIC-5.2□□□□□ -3.24
CCDC42Q96M95 MIR4511-201ENST00000582784 87 ntBASIC-5.2□□□□□ -3.24
CCDC42Q96M95 SNORD114-13-201ENST00000364377 74 ntBASIC-5.21□□□□□ -3.24
CCDC42Q96M95 RNY4P10-201ENST00000365571 96 ntBASIC-5.21□□□□□ -3.24
CCDC42Q96M95 RNU6-242P-201ENST00000384359 107 ntBASIC-5.22□□□□□ -3.25
CCDC42Q96M95 Y_RNA.663-201ENST00000516043 101 ntBASIC-5.22□□□□□ -3.25
CCDC42Q96M95 MIR4666B-201ENST00000578142 81 ntBASIC-5.22□□□□□ -3.25
CCDC42Q96M95 RNU6-1131P-201ENST00000364955 107 ntBASIC-5.23□□□□□ -3.25
CCDC42Q96M95 Y_RNA.657-201ENST00000515983 102 ntBASIC-5.23□□□□□ -3.25
CCDC42Q96M95 AC103706.3-201ENST00000636297 85 ntBASIC-5.23□□□□□ -3.25
CCDC42Q96M95 RNU6-737P-201ENST00000365370 107 ntBASIC-5.24□□□□□ -3.25
CCDC42Q96M95 RNU6-49P-201ENST00000384256 107 ntBASIC-5.24□□□□□ -3.25
CCDC42Q96M95 SNORD30.1-201ENST00000391309 70 ntBASIC-5.24□□□□□ -3.25
CCDC42Q96M95 RNU6-147P-201ENST00000383983 107 ntBASIC-5.26□□□□□ -3.25
CCDC42Q96M95 RNU6-1276P-201ENST00000365372 104 ntBASIC-5.27□□□□□ -3.25
CCDC42Q96M95 RNU6-1117P-201ENST00000384525 104 ntBASIC-5.27□□□□□ -3.25
CCDC42Q96M95 MIR656-201ENST00000385224 78 ntBASIC-5.27□□□□□ -3.25
CCDC42Q96M95 RNU6-1154P-201ENST00000391001 104 ntBASIC-5.27□□□□□ -3.25
CCDC42Q96M95 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-5.28□□□□□ -3.25
CCDC42Q96M95 Y_RNA.722-201ENST00000517279 114 ntBASIC-5.29□□□□□ -3.26
CCDC42Q96M95 MIR4317-201ENST00000637586 65 ntBASIC-5.29□□□□□ -3.26
CCDC42Q96M95 MIR548X-201ENST00000580069 75 ntBASIC-5.3□□□□□ -3.26
CCDC42Q96M95 RNU6-313P-201ENST00000516317 112 ntBASIC-5.31□□□□□ -3.26
CCDC42Q96M95 RNA5SP224-201ENST00000365069 126 ntBASIC-5.34□□□□□ -3.26
CCDC42Q96M95 Y_RNA.206-201ENST00000364136 102 ntBASIC-5.35□□□□□ -3.27
CCDC42Q96M95 Y_RNA.260-201ENST00000364628 101 ntBASIC-5.35□□□□□ -3.27
CCDC42Q96M95 Y_RNA.545-201ENST00000384652 105 ntBASIC-5.36□□□□□ -3.27
CCDC42Q96M95 MIR494-201ENST00000349529 81 ntBASIC-5.38□□□□□ -3.27
CCDC42Q96M95 RNU6-871P-201ENST00000516122 100 ntBASIC-5.38□□□□□ -3.27
CCDC42Q96M95 RNU6-1340P-201ENST00000384438 107 ntBASIC-5.39□□□□□ -3.27
CCDC42Q96M95 U6.111-201ENST00000636093 83 ntBASIC-5.39□□□□□ -3.27
CCDC42Q96M95 MIR4679-1-201ENST00000637619 75 ntBASIC-5.39□□□□□ -3.27
CCDC42Q96M95 SNORD45C-201ENST00000383893 79 ntBASIC-5.4□□□□□ -3.27
CCDC42Q96M95 RNU6-787P-201ENST00000384032 107 ntBASIC-5.42□□□□□ -3.28
CCDC42Q96M95 RNU6-794P-201ENST00000517261 64 ntBASIC-5.42□□□□□ -3.28
CCDC42Q96M95 RNU6-209P-201ENST00000384118 107 ntBASIC-5.43□□□□□ -3.28
CCDC42Q96M95 RNU6-539P-201ENST00000516665 103 ntBASIC-5.43□□□□□ -3.28
CCDC42Q96M95 AC090425.1-201ENST00000610007 140 ntBASIC-5.43□□□□□ -3.28
CCDC42Q96M95 MIR450A2-201ENST00000385022 100 ntBASIC-5.45□□□□□ -3.28
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms