Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 RNU6-542P-201ENST00000516405 103 ntBASIC-0.65□□□□□ -2.51
SYNE1Q8NF91 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.65□□□□□ -2.51
SYNE1Q8NF91 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.65□□□□□ -2.51
SYNE1Q8NF91 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-0.65□□□□□ -2.51
SYNE1Q8NF91 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.65□□□□□ -2.51
SYNE1Q8NF91 Y_RNA.137-201ENST00000363455 112 ntBASIC-0.65□□□□□ -2.51
SYNE1Q8NF91 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.65□□□□□ -2.51
SYNE1Q8NF91 RNU6-68P-201ENST00000516576 104 ntBASIC-0.65□□□□□ -2.51
SYNE1Q8NF91 RNU6-789P-201ENST00000517105 102 ntBASIC-0.65□□□□□ -2.51
SYNE1Q8NF91 MIR202-201ENST00000362219 110 ntBASIC-0.65□□□□□ -2.51
SYNE1Q8NF91 RNU6-530P-201ENST00000391180 107 ntBASIC-0.65□□□□□ -2.51
SYNE1Q8NF91 RNU6-346P-201ENST00000516288 111 ntBASIC-0.65□□□□□ -2.51
SYNE1Q8NF91 SNORD116-24-201ENST00000384549 92 ntBASIC-0.66□□□□□ -2.51
SYNE1Q8NF91 Y_RNA.43-201ENST00000362670 111 ntBASIC-0.66□□□□□ -2.51
SYNE1Q8NF91 RNU6-231P-201ENST00000517122 103 ntBASIC-0.66□□□□□ -2.51
SYNE1Q8NF91 RNU6-867P-201ENST00000364956 107 ntBASIC-0.66□□□□□ -2.52
SYNE1Q8NF91 Y_RNA.382-201ENST00000365672 114 ntBASIC-0.66□□□□□ -2.52
SYNE1Q8NF91 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-0.66□□□□□ -2.52
SYNE1Q8NF91 RNU6-959P-201ENST00000384671 107 ntBASIC-0.66□□□□□ -2.52
SYNE1Q8NF91 SNORD115-45-201ENST00000391078 81 ntBASIC-0.66□□□□□ -2.52
SYNE1Q8NF91 AL365222.1-201ENST00000614661 98 ntBASIC-0.66□□□□□ -2.52
SYNE1Q8NF91 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-0.66□□□□□ -2.52
SYNE1Q8NF91 Y_RNA.593-201ENST00000410292 98 ntBASIC-0.67□□□□□ -2.52
SYNE1Q8NF91 Y_RNA.69-201ENST00000362885 109 ntBASIC-0.67□□□□□ -2.52
SYNE1Q8NF91 RNU6-32P-201ENST00000383948 107 ntBASIC-0.67□□□□□ -2.52
SYNE1Q8NF91 RNU6-13P-201ENST00000384248 107 ntBASIC-0.67□□□□□ -2.52
SYNE1Q8NF91 RNU6-12P-201ENST00000384604 107 ntBASIC-0.67□□□□□ -2.52
SYNE1Q8NF91 RNU6-41P-201ENST00000384741 107 ntBASIC-0.67□□□□□ -2.52
SYNE1Q8NF91 MIR5588-201ENST00000581890 63 ntBASIC-0.67□□□□□ -2.52
SYNE1Q8NF91 MIR4484-201ENST00000582855 83 ntBASIC-0.67□□□□□ -2.52
SYNE1Q8NF91 RNU6-916P-201ENST00000516088 109 ntBASIC-0.67□□□□□ -2.52
SYNE1Q8NF91 AC139453.2-201ENST00000487255 133 ntBASIC-0.67□□□□□ -2.52
SYNE1Q8NF91 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.67□□□□□ -2.52
SYNE1Q8NF91 RNU6-209P-201ENST00000384118 107 ntBASIC-0.67□□□□□ -2.52
SYNE1Q8NF91 MIR1245B-201ENST00000636115 69 ntBASIC-0.67□□□□□ -2.52
SYNE1Q8NF91 MIR4719-201ENST00000585233 84 ntBASIC-0.68□□□□□ -2.52
SYNE1Q8NF91 MALAT1.1-201ENST00000618249 95 ntBASIC-0.68□□□□□ -2.52
SYNE1Q8NF91 RNU6-1047P-201ENST00000364418 107 ntBASIC-0.68□□□□□ -2.52
SYNE1Q8NF91 RNA5SP224-201ENST00000365069 126 ntBASIC-0.68□□□□□ -2.52
SYNE1Q8NF91 RNU6-380P-201ENST00000410207 107 ntBASIC-0.68□□□□□ -2.52
SYNE1Q8NF91 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.68□□□□□ -2.52
SYNE1Q8NF91 SNORA25.5-201ENST00000363782 126 ntBASIC-0.68□□□□□ -2.52
SYNE1Q8NF91 RNU6-1277P-201ENST00000364561 107 ntBASIC-0.68□□□□□ -2.52
SYNE1Q8NF91 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.68□□□□□ -2.52
SYNE1Q8NF91 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.68□□□□□ -2.52
SYNE1Q8NF91 MIR4666B-201ENST00000578142 81 ntBASIC-0.68□□□□□ -2.52
SYNE1Q8NF91 RNU6-1312P-201ENST00000362425 108 ntBASIC-0.68□□□□□ -2.52
SYNE1Q8NF91 SNORD30.1-201ENST00000391309 70 ntBASIC-0.68□□□□□ -2.52
SYNE1Q8NF91 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-0.68□□□□□ -2.52
SYNE1Q8NF91 SNORA25.4-201ENST00000363666 124 ntBASIC-0.69□□□□□ -2.52
SYNE1Q8NF91 RNU6-794P-201ENST00000517261 64 ntBASIC-0.69□□□□□ -2.52
SYNE1Q8NF91 MIR548X-201ENST00000580069 75 ntBASIC-0.69□□□□□ -2.52
SYNE1Q8NF91 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.69□□□□□ -2.52
SYNE1Q8NF91 Y_RNA.316-201ENST00000365118 111 ntBASIC-0.69□□□□□ -2.52
SYNE1Q8NF91 RNU6-895P-201ENST00000384125 103 ntBASIC-0.69□□□□□ -2.52
SYNE1Q8NF91 AC062037.1-201ENST00000605302 128 ntBASIC-0.69□□□□□ -2.52
SYNE1Q8NF91 AC074348.1-201ENST00000426503 132 ntBASIC-0.69□□□□□ -2.52
SYNE1Q8NF91 SNORD116-14-201ENST00000383894 92 ntBASIC-0.7□□□□□ -2.52
SYNE1Q8NF91 SNORD116-17-201ENST00000383929 92 ntBASIC-0.7□□□□□ -2.52
SYNE1Q8NF91 SNORD116-15-201ENST00000384445 92 ntBASIC-0.7□□□□□ -2.52
SYNE1Q8NF91 SNORD116-19-201ENST00000384729 92 ntBASIC-0.7□□□□□ -2.52
SYNE1Q8NF91 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.7□□□□□ -2.52
SYNE1Q8NF91 MIR1302-5-201ENST00000408164 150 ntBASIC-0.7□□□□□ -2.52
SYNE1Q8NF91 RNU6-1045P-201ENST00000516321 107 ntBASIC-0.7□□□□□ -2.52
SYNE1Q8NF91 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.7□□□□□ -2.52
SYNE1Q8NF91 MTND5P41-201ENST00000517498 206 ntBASIC-0.7□□□□□ -2.52
SYNE1Q8NF91 RNU6-313P-201ENST00000516317 112 ntBASIC-0.7□□□□□ -2.52
SYNE1Q8NF91 RNU6-687P-201ENST00000516443 89 ntBASIC-0.7□□□□□ -2.52
SYNE1Q8NF91 MIR548M-201ENST00000408260 86 ntBASIC-0.71□□□□□ -2.52
SYNE1Q8NF91 RNU6-919P-201ENST00000516731 104 ntBASIC-0.71□□□□□ -2.52
SYNE1Q8NF91 MIR4712-201ENST00000583750 82 ntBASIC-0.71□□□□□ -2.52
SYNE1Q8NF91 RNU6-1134P-201ENST00000365156 101 ntBASIC-0.71□□□□□ -2.52
SYNE1Q8NF91 RNU6-820P-201ENST00000384273 107 ntBASIC-0.71□□□□□ -2.52
SYNE1Q8NF91 RNU6-776P-201ENST00000364403 104 ntBASIC-0.71□□□□□ -2.52
SYNE1Q8NF91 RNU6-1022P-201ENST00000365049 104 ntBASIC-0.71□□□□□ -2.52
SYNE1Q8NF91 SNORD113-1-201ENST00000365321 69 ntBASIC-0.71□□□□□ -2.52
SYNE1Q8NF91 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-0.71□□□□□ -2.52
SYNE1Q8NF91 U7.4-201ENST00000614961 63 ntBASIC-0.71□□□□□ -2.52
SYNE1Q8NF91 Y_RNA.320-201ENST00000365144 102 ntBASIC-0.72□□□□□ -2.52
SYNE1Q8NF91 RNU6-665P-201ENST00000384639 107 ntBASIC-0.72□□□□□ -2.52
SYNE1Q8NF91 MIR4679-1-201ENST00000637619 75 ntBASIC-0.72□□□□□ -2.52
SYNE1Q8NF91 Y_RNA.663-201ENST00000516043 101 ntBASIC-0.72□□□□□ -2.52
SYNE1Q8NF91 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.72□□□□□ -2.52
SYNE1Q8NF91 Y_RNA.260-201ENST00000364628 101 ntBASIC-0.72□□□□□ -2.52
SYNE1Q8NF91 Y_RNA.406-201ENST00000383984 100 ntBASIC-0.72□□□□□ -2.52
SYNE1Q8NF91 SNORA40.16-201ENST00000517238 121 ntBASIC-0.72□□□□□ -2.52
SYNE1Q8NF91 RNU6-294P-201ENST00000364999 102 ntBASIC-0.72□□□□□ -2.53
SYNE1Q8NF91 Y_RNA.63-201ENST00000362841 102 ntBASIC-0.73□□□□□ -2.53
SYNE1Q8NF91 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.73□□□□□ -2.53
SYNE1Q8NF91 MIR3134-201ENST00000579433 74 ntBASIC-0.73□□□□□ -2.53
SYNE1Q8NF91 MIRLET7A2-201ENST00000362105 72 ntBASIC-0.73□□□□□ -2.53
SYNE1Q8NF91 RNU6-1276P-201ENST00000365372 104 ntBASIC-0.73□□□□□ -2.53
SYNE1Q8NF91 RNU6-634P-201ENST00000459134 106 ntBASIC-0.73□□□□□ -2.53
SYNE1Q8NF91 RNU6-122P-201ENST00000516818 107 ntBASIC-0.73□□□□□ -2.53
SYNE1Q8NF91 RNU6-1011P-201ENST00000384668 107 ntBASIC-0.73□□□□□ -2.53
SYNE1Q8NF91 RNU6-49P-201ENST00000384256 107 ntBASIC-0.74□□□□□ -2.53
SYNE1Q8NF91 RNU6-1326P-201ENST00000391262 107 ntBASIC-0.74□□□□□ -2.53
SYNE1Q8NF91 AL451105.1-201ENST00000450005 189 ntBASIC-0.74□□□□□ -2.53
SYNE1Q8NF91 RNA5SP449-201ENST00000516871 130 ntBASIC-0.74□□□□□ -2.53
SYNE1Q8NF91 AC103706.3-201ENST00000636297 85 ntBASIC-0.74□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms