Protein–RNA interactions for Protein: Q02388

COL7A1, Collagen alpha-1(VII) chain, humanhuman

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1Q02388 RNU6-231P-201ENST00000517122 103 ntBASIC-0.71□□□□□ -2.52
COL7A1Q02388 SNORA63.4-201ENST00000362763 126 ntBASIC-0.71□□□□□ -2.52
COL7A1Q02388 SNORD45.2-201ENST00000363552 72 ntBASIC-0.71□□□□□ -2.52
COL7A1Q02388 RNU6-219P-201ENST00000364728 107 ntBASIC-0.71□□□□□ -2.52
COL7A1Q02388 RNU6-209P-201ENST00000384118 107 ntBASIC-0.71□□□□□ -2.52
COL7A1Q02388 AC139453.2-201ENST00000487255 133 ntBASIC-0.71□□□□□ -2.52
COL7A1Q02388 RNU6-176P-201ENST00000517196 105 ntBASIC-0.71□□□□□ -2.52
COL7A1Q02388 RNU6-22P-201ENST00000384355 107 ntBASIC-0.72□□□□□ -2.52
COL7A1Q02388 SNORD115-45-201ENST00000391078 81 ntBASIC-0.72□□□□□ -2.52
COL7A1Q02388 MIR548X2-201ENST00000579776 100 ntBASIC-0.72□□□□□ -2.52
COL7A1Q02388 AC062037.1-201ENST00000605302 128 ntBASIC-0.72□□□□□ -2.52
COL7A1Q02388 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.72□□□□□ -2.53
COL7A1Q02388 SNORD116-24-201ENST00000384549 92 ntBASIC-0.72□□□□□ -2.53
COL7A1Q02388 RNU6-959P-201ENST00000384671 107 ntBASIC-0.72□□□□□ -2.53
COL7A1Q02388 Y_RNA.720-201ENST00000517166 92 ntBASIC-0.72□□□□□ -2.53
COL7A1Q02388 MIR4484-201ENST00000582855 83 ntBASIC-0.72□□□□□ -2.53
COL7A1Q02388 RNU6-776P-201ENST00000364403 104 ntBASIC-0.73□□□□□ -2.53
COL7A1Q02388 RNU6-1022P-201ENST00000365049 104 ntBASIC-0.73□□□□□ -2.53
COL7A1Q02388 Y_RNA.422-201ENST00000384054 114 ntBASIC-0.73□□□□□ -2.53
COL7A1Q02388 RNU6-895P-201ENST00000384125 103 ntBASIC-0.73□□□□□ -2.53
COL7A1Q02388 RNU6-422P-201ENST00000384632 107 ntBASIC-0.73□□□□□ -2.53
COL7A1Q02388 MIR545-201ENST00000385085 106 ntBASIC-0.73□□□□□ -2.53
COL7A1Q02388 AL451105.1-201ENST00000450005 189 ntBASIC-0.73□□□□□ -2.53
COL7A1Q02388 RNU6-589P-201ENST00000516485 107 ntBASIC-0.73□□□□□ -2.53
COL7A1Q02388 MIR4666B-201ENST00000578142 81 ntBASIC-0.73□□□□□ -2.53
COL7A1Q02388 RNU6-867P-201ENST00000364956 107 ntBASIC-0.73□□□□□ -2.53
COL7A1Q02388 RNU6-1276P-201ENST00000365372 104 ntBASIC-0.73□□□□□ -2.53
COL7A1Q02388 RNU6-738P-201ENST00000384531 106 ntBASIC-0.73□□□□□ -2.53
COL7A1Q02388 MIR569-201ENST00000385228 96 ntBASIC-0.73□□□□□ -2.53
COL7A1Q02388 Y_RNA.61-201ENST00000362835 102 ntBASIC-0.74□□□□□ -2.53
COL7A1Q02388 SNORD115.2-201ENST00000391126 59 ntBASIC-0.74□□□□□ -2.53
COL7A1Q02388 RNU6-916P-201ENST00000516088 109 ntBASIC-0.74□□□□□ -2.53
COL7A1Q02388 RNA5SP449-201ENST00000516871 130 ntBASIC-0.74□□□□□ -2.53
COL7A1Q02388 AL117187.1-201ENST00000555482 181 ntBASIC-0.74□□□□□ -2.53
COL7A1Q02388 RNU6-829P-201ENST00000363700 112 ntBASIC-0.74□□□□□ -2.53
COL7A1Q02388 RNY4P30-201ENST00000410216 95 ntBASIC-0.74□□□□□ -2.53
COL7A1Q02388 MTCYBP6-201ENST00000441810 138 ntBASIC-0.74□□□□□ -2.53
COL7A1Q02388 RNU7-120P-201ENST00000459334 63 ntBASIC-0.74□□□□□ -2.53
COL7A1Q02388 RNU4-33P-201ENST00000364316 85 ntBASIC-0.75□□□□□ -2.53
COL7A1Q02388 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.75□□□□□ -2.53
COL7A1Q02388 RNU6-1206P-201ENST00000516339 103 ntBASIC-0.75□□□□□ -2.53
COL7A1Q02388 Y_RNA.702-201ENST00000516843 96 ntBASIC-0.75□□□□□ -2.53
COL7A1Q02388 MALAT1.1-201ENST00000618249 95 ntBASIC-0.75□□□□□ -2.53
COL7A1Q02388 RNU6-1312P-201ENST00000362425 108 ntBASIC-0.75□□□□□ -2.53
COL7A1Q02388 Y_RNA.69-201ENST00000362885 109 ntBASIC-0.75□□□□□ -2.53
COL7A1Q02388 RNU6-49P-201ENST00000384256 107 ntBASIC-0.75□□□□□ -2.53
COL7A1Q02388 Y_RNA.593-201ENST00000410292 98 ntBASIC-0.75□□□□□ -2.53
COL7A1Q02388 MIR4511-201ENST00000582784 87 ntBASIC-0.75□□□□□ -2.53
COL7A1Q02388 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.75□□□□□ -2.53
COL7A1Q02388 RNU6-1134P-201ENST00000365156 101 ntBASIC-0.75□□□□□ -2.53
COL7A1Q02388 AC110620.1-201ENST00000416042 228 ntBASIC-0.75□□□□□ -2.53
COL7A1Q02388 RNU6-640P-201ENST00000363693 105 ntBASIC-0.76□□□□□ -2.53
COL7A1Q02388 MIR124-1-201ENST00000385275 85 ntBASIC-0.76□□□□□ -2.53
COL7A1Q02388 RNU6-808P-201ENST00000391233 108 ntBASIC-0.76□□□□□ -2.53
COL7A1Q02388 Y_RNA.663-201ENST00000516043 101 ntBASIC-0.76□□□□□ -2.53
COL7A1Q02388 MIR548AL-201ENST00000578416 97 ntBASIC-0.76□□□□□ -2.53
COL7A1Q02388 RNU6-1255P-201ENST00000363434 112 ntBASIC-0.77□□□□□ -2.53
COL7A1Q02388 Y_RNA.335-201ENST00000365299 96 ntBASIC-0.77□□□□□ -2.53
COL7A1Q02388 RNU6-886P-201ENST00000384319 105 ntBASIC-0.77□□□□□ -2.53
COL7A1Q02388 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-0.77□□□□□ -2.53
COL7A1Q02388 MIR450A1-201ENST00000362262 91 ntBASIC-0.77□□□□□ -2.53
COL7A1Q02388 RNU6-986P-201ENST00000363133 102 ntBASIC-0.77□□□□□ -2.53
COL7A1Q02388 Y_RNA.149-201ENST00000363558 117 ntBASIC-0.77□□□□□ -2.53
COL7A1Q02388 RNU6-294P-201ENST00000364999 102 ntBASIC-0.77□□□□□ -2.53
COL7A1Q02388 RNU6-257P-201ENST00000410238 98 ntBASIC-0.77□□□□□ -2.53
COL7A1Q02388 Y_RNA.137-201ENST00000363455 112 ntBASIC-0.78□□□□□ -2.53
COL7A1Q02388 Y_RNA.345-201ENST00000365384 92 ntBASIC-0.78□□□□□ -2.53
COL7A1Q02388 RNU6-147P-201ENST00000383983 107 ntBASIC-0.78□□□□□ -2.53
COL7A1Q02388 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-0.78□□□□□ -2.53
COL7A1Q02388 MIR1302-5-201ENST00000408164 150 ntBASIC-0.78□□□□□ -2.53
COL7A1Q02388 MIR1255A-201ENST00000408338 113 ntBASIC-0.78□□□□□ -2.53
COL7A1Q02388 AC008267.6-201ENST00000441664 139 ntBASIC-0.78□□□□□ -2.53
COL7A1Q02388 RNU7-200P-201ENST00000516105 62 ntBASIC-0.78□□□□□ -2.53
COL7A1Q02388 RNU6-687P-201ENST00000516443 89 ntBASIC-0.78□□□□□ -2.53
COL7A1Q02388 MIR3134-201ENST00000579433 74 ntBASIC-0.78□□□□□ -2.53
COL7A1Q02388 Y_RNA.565-201ENST00000384719 101 ntBASIC-0.78□□□□□ -2.53
COL7A1Q02388 MIR656-201ENST00000385224 78 ntBASIC-0.78□□□□□ -2.54
COL7A1Q02388 AL359920.1-201ENST00000618332 176 ntBASIC-0.78□□□□□ -2.54
COL7A1Q02388 Y_RNA.406-201ENST00000383984 100 ntBASIC-0.79□□□□□ -2.54
COL7A1Q02388 RNU6-919P-201ENST00000516731 104 ntBASIC-0.79□□□□□ -2.54
COL7A1Q02388 SNORD113-1-201ENST00000365321 69 ntBASIC-0.79□□□□□ -2.54
COL7A1Q02388 RNU6-1043P-201ENST00000410355 99 ntBASIC-0.79□□□□□ -2.54
COL7A1Q02388 RNU6-346P-201ENST00000516288 111 ntBASIC-0.79□□□□□ -2.54
COL7A1Q02388 RNU6-1045P-201ENST00000516321 107 ntBASIC-0.79□□□□□ -2.54
COL7A1Q02388 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.79□□□□□ -2.54
COL7A1Q02388 Y_RNA.722-201ENST00000517279 114 ntBASIC-0.79□□□□□ -2.54
COL7A1Q02388 MIR3938-201ENST00000582157 103 ntBASIC-0.79□□□□□ -2.54
COL7A1Q02388 MIR4503-201ENST00000582187 83 ntBASIC-0.79□□□□□ -2.54
COL7A1Q02388 MIR1302-3-201ENST00000408128 138 ntBASIC-0.8□□□□□ -2.54
COL7A1Q02388 U7.4-201ENST00000614961 63 ntBASIC-0.8□□□□□ -2.54
COL7A1Q02388 SNORA26.2-201ENST00000390922 122 ntBASIC-0.8□□□□□ -2.54
COL7A1Q02388 MIR548AH-201ENST00000637109 76 ntBASIC-0.8□□□□□ -2.54
COL7A1Q02388 SNORD45C-201ENST00000383893 79 ntBASIC-0.81□□□□□ -2.54
COL7A1Q02388 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.81□□□□□ -2.54
COL7A1Q02388 RNU6-380P-201ENST00000410207 107 ntBASIC-0.81□□□□□ -2.54
COL7A1Q02388 AL365222.1-201ENST00000614661 98 ntBASIC-0.81□□□□□ -2.54
COL7A1Q02388 RNU6-1204P-201ENST00000363948 107 ntBASIC-0.81□□□□□ -2.54
COL7A1Q02388 SNORD113-4-201ENST00000364802 75 ntBASIC-0.81□□□□□ -2.54
COL7A1Q02388 RNU6-787P-201ENST00000384032 107 ntBASIC-0.81□□□□□ -2.54
COL7A1Q02388 RNU6-820P-201ENST00000384273 107 ntBASIC-0.81□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 154.1 ms