Protein–RNA interactions for Protein: P54852

EMP3, Epithelial membrane protein 3, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3P54852 MIR1295B-201ENST00000636144 60 ntBASIC0.12□□□□□ -2.39
EMP3P54852 Y_RNA.30-201ENST00000362572 97 ntBASIC0.11□□□□□ -2.39
EMP3P54852 RNA5SP63-201ENST00000391225 112 ntBASIC0.11□□□□□ -2.39
EMP3P54852 MIR6718-201ENST00000616153 80 ntBASIC0.11□□□□□ -2.39
EMP3P54852 RNU6-576P-201ENST00000390854 102 ntBASIC0.1□□□□□ -2.39
EMP3P54852 SNORA3B-201ENST00000391305 131 ntBASIC0.09□□□□□ -2.4
EMP3P54852 AC097484.2-201ENST00000509147 251 ntBASIC0.09□□□□□ -2.4
EMP3P54852 Y_RNA.647-201ENST00000459194 112 ntBASIC0.08□□□□□ -2.4
EMP3P54852 Y_RNA.640-201ENST00000459296 112 ntBASIC0.08□□□□□ -2.4
EMP3P54852 Y_RNA.803-201ENST00000614432 112 ntBASIC0.08□□□□□ -2.4
EMP3P54852 Y_RNA.815-201ENST00000616655 112 ntBASIC0.08□□□□□ -2.4
EMP3P54852 MIR2909-201ENST00000617113 69 ntBASIC0.08□□□□□ -2.4
EMP3P54852 Y_RNA.795-201ENST00000619475 112 ntBASIC0.08□□□□□ -2.4
EMP3P54852 Y_RNA.827-201ENST00000638104 112 ntBASIC0.08□□□□□ -2.4
EMP3P54852 RNU6-737P-201ENST00000365370 107 ntBASIC0.07□□□□□ -2.4
EMP3P54852 AP001180.6-201ENST00000584918 159 ntBASIC0.07□□□□□ -2.4
EMP3P54852 MIR4436A-201ENST00000585278 85 ntBASIC0.07□□□□□ -2.4
EMP3P54852 Y_RNA.696-201ENST00000516725 107 ntBASIC0.05□□□□□ -2.4
EMP3P54852 RNA5SP257-201ENST00000363023 116 ntBASIC0.04□□□□□ -2.4
EMP3P54852 SNORD114-25-201ENST00000363742 72 ntBASIC0.04□□□□□ -2.4
EMP3P54852 SNORD114-14-201ENST00000362723 75 ntBASIC0.03□□□□□ -2.4
EMP3P54852 Y_RNA.175-201ENST00000363794 111 ntBASIC0.03□□□□□ -2.4
EMP3P54852 MIR5190-201ENST00000581537 80 ntBASIC0.01□□□□□ -2.41
EMP3P54852 MIR4768-201ENST00000585270 74 ntBASIC0.01□□□□□ -2.41
EMP3P54852 RNU6-841P-201ENST00000383872 107 ntBASIC0□□□□□ -2.41
EMP3P54852 MIR4667-201ENST00000578933 66 ntBASIC-0.01□□□□□ -2.41
EMP3P54852 SNORD114-16-201ENST00000363044 70 ntBASIC-0.02□□□□□ -2.41
EMP3P54852 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.02□□□□□ -2.41
EMP3P54852 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.02□□□□□ -2.41
EMP3P54852 MIR548AH-201ENST00000637109 76 ntBASIC-0.02□□□□□ -2.41
EMP3P54852 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.04□□□□□ -2.42
EMP3P54852 MIR548AM-201ENST00000584298 74 ntBASIC-0.05□□□□□ -2.42
EMP3P54852 MIR371B-201ENST00000638082 66 ntBASIC-0.05□□□□□ -2.42
EMP3P54852 RNU6-1161P-201ENST00000516176 102 ntBASIC-0.07□□□□□ -2.42
EMP3P54852 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.09□□□□□ -2.42
EMP3P54852 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.09□□□□□ -2.42
EMP3P54852 Y_RNA.103-201ENST00000363171 102 ntBASIC-0.1□□□□□ -2.43
EMP3P54852 MIR196A2-201ENST00000385189 110 ntBASIC-0.1□□□□□ -2.43
EMP3P54852 RNA5SP285-201ENST00000516619 119 ntBASIC-0.12□□□□□ -2.43
EMP3P54852 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.14□□□□□ -2.43
EMP3P54852 SNORD126-201ENST00000459475 77 ntBASIC-0.14□□□□□ -2.43
EMP3P54852 MIR8485-201ENST00000401372 91 ntBASIC-0.16□□□□□ -2.44
EMP3P54852 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.17□□□□□ -2.44
EMP3P54852 SNORD14C-201ENST00000365382 88 ntBASIC-0.17□□□□□ -2.44
EMP3P54852 MIR6759-201ENST00000638110 65 ntBASIC-0.18□□□□□ -2.44
EMP3P54852 MIR6502-201ENST00000617296 76 ntBASIC-0.19□□□□□ -2.44
EMP3P54852 Y_RNA.663-201ENST00000516043 101 ntBASIC-0.24□□□□□ -2.45
EMP3P54852 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.25□□□□□ -2.45
EMP3P54852 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.25□□□□□ -2.45
EMP3P54852 MIR4802-201ENST00000581881 80 ntBASIC-0.25□□□□□ -2.45
EMP3P54852 AL731768.1-201ENST00000603124 139 ntBASIC-0.26□□□□□ -2.45
EMP3P54852 MIR214-201ENST00000385214 110 ntBASIC-0.27□□□□□ -2.45
EMP3P54852 Y_RNA.137-201ENST00000363455 112 ntBASIC-0.28□□□□□ -2.45
EMP3P54852 SNORD115-45-201ENST00000391078 81 ntBASIC-0.28□□□□□ -2.45
EMP3P54852 MIR487B-201ENST00000385021 84 ntBASIC-0.29□□□□□ -2.46
EMP3P54852 MIR4636-201ENST00000582271 80 ntBASIC-0.29□□□□□ -2.46
EMP3P54852 SNORD114-31-201ENST00000363219 75 ntBASIC-0.3□□□□□ -2.46
EMP3P54852 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.3□□□□□ -2.46
EMP3P54852 MIR5589-201ENST00000579442 60 ntBASIC-0.3□□□□□ -2.46
EMP3P54852 RNU6-320P-201ENST00000516511 106 ntBASIC-0.31□□□□□ -2.46
EMP3P54852 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.32□□□□□ -2.46
EMP3P54852 MIR4499-201ENST00000584834 69 ntBASIC-0.32□□□□□ -2.46
EMP3P54852 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.33□□□□□ -2.46
EMP3P54852 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.33□□□□□ -2.46
EMP3P54852 IGLVI-20-201ENST00000519296 130 ntBASIC-0.33□□□□□ -2.46
EMP3P54852 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.35□□□□□ -2.47
EMP3P54852 uc_338.19-201ENST00000616808 99 ntBASIC-0.37□□□□□ -2.47
EMP3P54852 RNA5SP275-201ENST00000363936 118 ntBASIC-0.38□□□□□ -2.47
EMP3P54852 MIR4520-1-201ENST00000582609 70 ntBASIC-0.41□□□□□ -2.48
EMP3P54852 SNORD114-28-201ENST00000363610 72 ntBASIC-0.42□□□□□ -2.48
EMP3P54852 RNU6-1277P-201ENST00000364561 107 ntBASIC-0.42□□□□□ -2.48
EMP3P54852 MIR4493-201ENST00000584016 73 ntBASIC-0.43□□□□□ -2.48
EMP3P54852 AL359920.1-201ENST00000618332 176 ntBASIC-0.44□□□□□ -2.48
EMP3P54852 RPS29P8-201ENST00000445109 171 ntBASIC-0.46□□□□□ -2.48
EMP3P54852 MIR6086-201ENST00000638065 55 ntBASIC-0.46□□□□□ -2.48
EMP3P54852 RNA5SP86-201ENST00000390869 98 ntBASIC-0.47□□□□□ -2.48
EMP3P54852 RNU6-706P-201ENST00000517229 104 ntBASIC-0.47□□□□□ -2.48
EMP3P54852 MIR101-1-201ENST00000362265 75 ntBASIC-0.48□□□□□ -2.49
EMP3P54852 MIR196A1-201ENST00000388006 70 ntBASIC-0.48□□□□□ -2.49
EMP3P54852 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-0.49□□□□□ -2.49
EMP3P54852 RNA5SP476-201ENST00000516613 103 ntBASIC-0.51□□□□□ -2.49
EMP3P54852 MIR548AZ-201ENST00000616567 95 ntBASIC-0.51□□□□□ -2.49
EMP3P54852 MIR604-201ENST00000384880 94 ntBASIC-0.52□□□□□ -2.49
EMP3P54852 RNU6-758P-201ENST00000516292 89 ntBASIC-0.52□□□□□ -2.49
EMP3P54852 Y_RNA.591-201ENST00000410228 104 ntBASIC-0.53□□□□□ -2.49
EMP3P54852 RNU6-226P-201ENST00000363778 107 ntBASIC-0.54□□□□□ -2.5
EMP3P54852 RNA5SP368-201ENST00000364298 116 ntBASIC-0.54□□□□□ -2.5
EMP3P54852 MIR8064-201ENST00000612863 90 ntBASIC-0.54□□□□□ -2.5
EMP3P54852 Y_RNA.501-201ENST00000384467 103 ntBASIC-0.55□□□□□ -2.5
EMP3P54852 Y_RNA.652-201ENST00000458902 102 ntBASIC-0.55□□□□□ -2.5
EMP3P54852 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-0.56□□□□□ -2.5
EMP3P54852 MIR4748-201ENST00000578076 82 ntBASIC-0.58□□□□□ -2.5
EMP3P54852 RNA5SP451-201ENST00000410588 110 ntBASIC-0.59□□□□□ -2.5
EMP3P54852 Y_RNA.612-201ENST00000410717 95 ntBASIC-0.59□□□□□ -2.5
EMP3P54852 HAR1A.1-201ENST00000459583 118 ntBASIC-0.59□□□□□ -2.5
EMP3P54852 RNU4-85P-201ENST00000364675 123 ntBASIC-0.6□□□□□ -2.51
EMP3P54852 SNORA32.3-201ENST00000384772 121 ntBASIC-0.6□□□□□ -2.51
EMP3P54852 SNORD83B-201ENST00000386745 93 ntBASIC-0.6□□□□□ -2.51
EMP3P54852 RNA5SP25-201ENST00000410815 110 ntBASIC-0.6□□□□□ -2.51
EMP3P54852 SNORD95.1-201ENST00000364099 68 ntBASIC-0.63□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms