Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 RNU6-313P-201ENST00000516317 112 ntBASIC-2.79□□□□□ -2.86
RFC3P40938 Y_RNA.63-201ENST00000362841 102 ntBASIC-2.8□□□□□ -2.86
RFC3P40938 RNU6-32P-201ENST00000383948 107 ntBASIC-2.8□□□□□ -2.86
RFC3P40938 RNU6-13P-201ENST00000384248 107 ntBASIC-2.8□□□□□ -2.86
RFC3P40938 RNU6-12P-201ENST00000384604 107 ntBASIC-2.8□□□□□ -2.86
RFC3P40938 RNU6-41P-201ENST00000384741 107 ntBASIC-2.8□□□□□ -2.86
RFC3P40938 RNU6-542P-201ENST00000516405 103 ntBASIC-2.8□□□□□ -2.86
RFC3P40938 MIR379-201ENST00000362218 67 ntBASIC-2.81□□□□□ -2.86
RFC3P40938 Y_RNA.73-201ENST00000362910 113 ntBASIC-2.81□□□□□ -2.86
RFC3P40938 Y_RNA.316-201ENST00000365118 111 ntBASIC-2.81□□□□□ -2.86
RFC3P40938 RNU6-1134P-201ENST00000365156 101 ntBASIC-2.81□□□□□ -2.86
RFC3P40938 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.81□□□□□ -2.86
RFC3P40938 RNU6-530P-201ENST00000391180 107 ntBASIC-2.81□□□□□ -2.86
RFC3P40938 Y_RNA.434-201ENST00000384090 100 ntBASIC-2.82□□□□□ -2.86
RFC3P40938 IGLL4P-201ENST00000614590 133 ntBASIC-2.82□□□□□ -2.86
RFC3P40938 SNORD114-13-201ENST00000364377 74 ntBASIC-2.83□□□□□ -2.86
RFC3P40938 SNORD116.2-201ENST00000391251 93 ntBASIC-2.83□□□□□ -2.86
RFC3P40938 Y_RNA.657-201ENST00000515983 102 ntBASIC-2.83□□□□□ -2.86
RFC3P40938 MIR548AI-201ENST00000579940 88 ntBASIC-2.83□□□□□ -2.86
RFC3P40938 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.84□□□□□ -2.86
RFC3P40938 RNU6-800P-201ENST00000384473 103 ntBASIC-2.84□□□□□ -2.86
RFC3P40938 MIR548AJ2-201ENST00000408539 92 ntBASIC-2.84□□□□□ -2.86
RFC3P40938 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.84□□□□□ -2.86
RFC3P40938 RNU6-231P-201ENST00000517122 103 ntBASIC-2.85□□□□□ -2.87
RFC3P40938 MIR5588-201ENST00000581890 63 ntBASIC-2.85□□□□□ -2.87
RFC3P40938 MIR1254-1-201ENST00000408257 97 ntBASIC-2.86□□□□□ -2.87
RFC3P40938 Y_RNA.593-201ENST00000410292 98 ntBASIC-2.86□□□□□ -2.87
RFC3P40938 Y_RNA.652-201ENST00000458902 102 ntBASIC-2.86□□□□□ -2.87
RFC3P40938 RNU6-68P-201ENST00000516576 104 ntBASIC-2.86□□□□□ -2.87
RFC3P40938 MIR4426-201ENST00000640330 63 ntBASIC-2.86□□□□□ -2.87
RFC3P40938 SNORD60.1-201ENST00000362451 73 ntBASIC-2.87□□□□□ -2.87
RFC3P40938 Y_RNA.612-201ENST00000410717 95 ntBASIC-2.87□□□□□ -2.87
RFC3P40938 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.89□□□□□ -2.87
RFC3P40938 AL359920.1-201ENST00000618332 176 ntBASIC-2.89□□□□□ -2.87
RFC3P40938 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.9□□□□□ -2.87
RFC3P40938 RNU6-300P-201ENST00000459080 104 ntBASIC-2.9□□□□□ -2.87
RFC3P40938 MIR4712-201ENST00000583750 82 ntBASIC-2.9□□□□□ -2.87
RFC3P40938 RNU6-590P-201ENST00000365039 107 ntBASIC-2.91□□□□□ -2.88
RFC3P40938 RNU6-979P-201ENST00000383896 107 ntBASIC-2.91□□□□□ -2.88
RFC3P40938 SNORA40B-201ENST00000385573 128 ntBASIC-2.92□□□□□ -2.88
RFC3P40938 Y_RNA.788-201ENST00000622394 112 ntBASIC-2.92□□□□□ -2.88
RFC3P40938 SNORD45.2-201ENST00000363552 72 ntBASIC-2.93□□□□□ -2.88
RFC3P40938 MIR3134-201ENST00000579433 74 ntBASIC-2.93□□□□□ -2.88
RFC3P40938 MIR1245B-201ENST00000636115 69 ntBASIC-2.93□□□□□ -2.88
RFC3P40938 Y_RNA.320-201ENST00000365144 102 ntBASIC-2.94□□□□□ -2.88
RFC3P40938 RNU6-147P-201ENST00000383983 107 ntBASIC-2.94□□□□□ -2.88
RFC3P40938 MIR548M-201ENST00000408260 86 ntBASIC-2.95□□□□□ -2.88
RFC3P40938 RNU7-171P-201ENST00000459581 62 ntBASIC-2.95□□□□□ -2.88
RFC3P40938 RNU6-176P-201ENST00000517196 105 ntBASIC-2.95□□□□□ -2.88
RFC3P40938 MIR3668-201ENST00000582138 75 ntBASIC-2.95□□□□□ -2.88
RFC3P40938 AL451105.1-201ENST00000450005 189 ntBASIC-2.96□□□□□ -2.88
RFC3P40938 RNU6-687P-201ENST00000516443 89 ntBASIC-2.96□□□□□ -2.88
RFC3P40938 Y_RNA.663-201ENST00000516043 101 ntBASIC-2.97□□□□□ -2.88
RFC3P40938 RNU6-1131P-201ENST00000364955 107 ntBASIC-2.98□□□□□ -2.89
RFC3P40938 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-2.98□□□□□ -2.89
RFC3P40938 SNORA40.16-201ENST00000517238 121 ntBASIC-2.99□□□□□ -2.89
RFC3P40938 RNU6-49P-201ENST00000384256 107 ntBASIC-3.01□□□□□ -2.89
RFC3P40938 Y_RNA.94-201ENST00000363068 106 ntBASIC-3.02□□□□□ -2.89
RFC3P40938 RNU6-345P-201ENST00000517001 107 ntBASIC-3.02□□□□□ -2.89
RFC3P40938 RNU6-737P-201ENST00000365370 107 ntBASIC-3.03□□□□□ -2.89
RFC3P40938 SNORD115-45-201ENST00000391078 81 ntBASIC-3.04□□□□□ -2.9
RFC3P40938 MIR3671-201ENST00000580455 88 ntBASIC-3.04□□□□□ -2.9
RFC3P40938 RNU7-119P-201ENST00000459279 63 ntBASIC-3.05□□□□□ -2.9
RFC3P40938 MIR3910-1-201ENST00000580936 111 ntBASIC-3.05□□□□□ -2.9
RFC3P40938 SNORA25.5-201ENST00000363782 126 ntBASIC-3.06□□□□□ -2.9
RFC3P40938 RNU6-411P-201ENST00000384451 107 ntBASIC-3.06□□□□□ -2.9
RFC3P40938 RNU6-122P-201ENST00000516818 107 ntBASIC-3.06□□□□□ -2.9
RFC3P40938 RNU6-1015P-201ENST00000517121 99 ntBASIC-3.07□□□□□ -2.9
RFC3P40938 SNORD113-1-201ENST00000365321 69 ntBASIC-3.08□□□□□ -2.9
RFC3P40938 Y_RNA.520-201ENST00000384556 102 ntBASIC-3.08□□□□□ -2.9
RFC3P40938 RNU6-742P-201ENST00000365289 107 ntBASIC-3.09□□□□□ -2.9
RFC3P40938 RNU6-242P-201ENST00000384359 107 ntBASIC-3.09□□□□□ -2.9
RFC3P40938 RNU6-663P-201ENST00000391105 106 ntBASIC-3.09□□□□□ -2.9
RFC3P40938 RNU6-1169P-201ENST00000363537 103 ntBASIC-3.1□□□□□ -2.91
RFC3P40938 RNU6-919P-201ENST00000516731 104 ntBASIC-3.1□□□□□ -2.91
RFC3P40938 RNU6-215P-201ENST00000365169 102 ntBASIC-3.11□□□□□ -2.91
RFC3P40938 MIR494-201ENST00000349529 81 ntBASIC-3.12□□□□□ -2.91
RFC3P40938 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-3.12□□□□□ -2.91
RFC3P40938 RNU6-1276P-201ENST00000365372 104 ntBASIC-3.13□□□□□ -2.91
RFC3P40938 MT-TR-201ENST00000387439 65 ntBASIC-3.13□□□□□ -2.91
RFC3P40938 RNU6-665P-201ENST00000384639 107 ntBASIC-3.14□□□□□ -2.91
RFC3P40938 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-3.14□□□□□ -2.91
RFC3P40938 MIR4666B-201ENST00000578142 81 ntBASIC-3.14□□□□□ -2.91
RFC3P40938 RNU6-822P-201ENST00000362707 106 ntBASIC-3.15□□□□□ -2.91
RFC3P40938 RNU6-1124P-201ENST00000384169 107 ntBASIC-3.15□□□□□ -2.91
RFC3P40938 RNU6-634P-201ENST00000459134 106 ntBASIC-3.15□□□□□ -2.91
RFC3P40938 RNU6-419P-201ENST00000517030 63 ntBASIC-3.15□□□□□ -2.91
RFC3P40938 SNORD20-201ENST00000384550 80 ntBASIC-3.16□□□□□ -2.92
RFC3P40938 RNU6-1161P-201ENST00000516176 102 ntBASIC-3.16□□□□□ -2.92
RFC3P40938 U7.4-201ENST00000614961 63 ntBASIC-3.16□□□□□ -2.92
RFC3P40938 SNORA25.4-201ENST00000363666 124 ntBASIC-3.17□□□□□ -2.92
RFC3P40938 RNU6-854P-201ENST00000364036 107 ntBASIC-3.18□□□□□ -2.92
RFC3P40938 RNA5SP89-201ENST00000410300 108 ntBASIC-3.18□□□□□ -2.92
RFC3P40938 RNY4P30-201ENST00000410216 95 ntBASIC-3.19□□□□□ -2.92
RFC3P40938 MIR124-1-201ENST00000385275 85 ntBASIC-3.2□□□□□ -2.92
RFC3P40938 SNORD30.1-201ENST00000391309 70 ntBASIC-3.21□□□□□ -2.92
RFC3P40938 MIR548AH-201ENST00000637109 76 ntBASIC-3.21□□□□□ -2.92
RFC3P40938 MIR450A2-201ENST00000385022 100 ntBASIC-3.22□□□□□ -2.92
RFC3P40938 Y_RNA.382-201ENST00000365672 114 ntBASIC-3.23□□□□□ -2.93
RFC3P40938 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-3.23□□□□□ -2.93
Retrieved 100 of 98,524 protein–RNA pairs in 200.1 ms