Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 RNU6-176P-201ENST00000517196 105 ntBASIC-3.18□□□□□ -2.92
HLA-DMBP28068 MIR5588-201ENST00000581890 63 ntBASIC-3.18□□□□□ -2.92
HLA-DMBP28068 MIR4712-201ENST00000583750 82 ntBASIC-3.18□□□□□ -2.92
HLA-DMBP28068 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-3.18□□□□□ -2.92
HLA-DMBP28068 RNU6-81P-201ENST00000365608 104 ntBASIC-3.19□□□□□ -2.92
HLA-DMBP28068 RNU6-345P-201ENST00000517001 107 ntBASIC-3.19□□□□□ -2.92
HLA-DMBP28068 Y_RNA.63-201ENST00000362841 102 ntBASIC-3.2□□□□□ -2.92
HLA-DMBP28068 RNU6-979P-201ENST00000383896 107 ntBASIC-3.21□□□□□ -2.92
HLA-DMBP28068 Y_RNA.593-201ENST00000410292 98 ntBASIC-3.21□□□□□ -2.92
HLA-DMBP28068 AL451105.1-201ENST00000450005 189 ntBASIC-3.21□□□□□ -2.92
HLA-DMBP28068 RNU6-687P-201ENST00000516443 89 ntBASIC-3.21□□□□□ -2.92
HLA-DMBP28068 MIRLET7A3-201ENST00000362116 74 ntBASIC-3.22□□□□□ -2.92
HLA-DMBP28068 Y_RNA.73-201ENST00000362910 113 ntBASIC-3.22□□□□□ -2.92
HLA-DMBP28068 RNU6-1168P-201ENST00000390831 104 ntBASIC-3.22□□□□□ -2.92
HLA-DMBP28068 SNORA40.16-201ENST00000517238 121 ntBASIC-3.22□□□□□ -2.92
HLA-DMBP28068 Y_RNA.830-201ENST00000628531 96 ntBASIC-3.22□□□□□ -2.92
HLA-DMBP28068 MIR1245B-201ENST00000636115 69 ntBASIC-3.22□□□□□ -2.92
HLA-DMBP28068 Y_RNA.79-201ENST00000362992 113 ntBASIC-3.23□□□□□ -2.93
HLA-DMBP28068 RNU6-800P-201ENST00000384473 103 ntBASIC-3.23□□□□□ -2.93
HLA-DMBP28068 IGLL4P-201ENST00000614590 133 ntBASIC-3.23□□□□□ -2.93
HLA-DMBP28068 RNU6-1134P-201ENST00000365156 101 ntBASIC-3.24□□□□□ -2.93
HLA-DMBP28068 Y_RNA.134-201ENST00000363435 105 ntBASIC-3.25□□□□□ -2.93
HLA-DMBP28068 RNU6-122P-201ENST00000516818 107 ntBASIC-3.25□□□□□ -2.93
HLA-DMBP28068 MIR3134-201ENST00000579433 74 ntBASIC-3.25□□□□□ -2.93
HLA-DMBP28068 Y_RNA.788-201ENST00000622394 112 ntBASIC-3.25□□□□□ -2.93
HLA-DMBP28068 RNU6-32P-201ENST00000383948 107 ntBASIC-3.26□□□□□ -2.93
HLA-DMBP28068 RNU6-13P-201ENST00000384248 107 ntBASIC-3.26□□□□□ -2.93
HLA-DMBP28068 RNU6-12P-201ENST00000384604 107 ntBASIC-3.26□□□□□ -2.93
HLA-DMBP28068 RNU6-41P-201ENST00000384741 107 ntBASIC-3.26□□□□□ -2.93
HLA-DMBP28068 RNU7-119P-201ENST00000459279 63 ntBASIC-3.26□□□□□ -2.93
HLA-DMBP28068 RNU7-171P-201ENST00000459581 62 ntBASIC-3.26□□□□□ -2.93
HLA-DMBP28068 Y_RNA.612-201ENST00000410717 95 ntBASIC-3.28□□□□□ -2.93
HLA-DMBP28068 RNU6-1015P-201ENST00000517121 99 ntBASIC-3.29□□□□□ -2.94
HLA-DMBP28068 SNORA25.5-201ENST00000363782 126 ntBASIC-3.3□□□□□ -2.94
HLA-DMBP28068 RNU6-22P-201ENST00000384355 107 ntBASIC-3.3□□□□□ -2.94
HLA-DMBP28068 Y_RNA.94-201ENST00000363068 106 ntBASIC-3.31□□□□□ -2.94
HLA-DMBP28068 RNU6-1169P-201ENST00000363537 103 ntBASIC-3.31□□□□□ -2.94
HLA-DMBP28068 Y_RNA.266-201ENST00000364678 96 ntBASIC-3.31□□□□□ -2.94
HLA-DMBP28068 Y_RNA.511-201ENST00000384514 103 ntBASIC-3.32□□□□□ -2.94
HLA-DMBP28068 AL359920.1-201ENST00000618332 176 ntBASIC-3.32□□□□□ -2.94
HLA-DMBP28068 RNU6-1124P-201ENST00000384169 107 ntBASIC-3.33□□□□□ -2.94
HLA-DMBP28068 RNU6-411P-201ENST00000384451 107 ntBASIC-3.33□□□□□ -2.94
HLA-DMBP28068 RNU6-794P-201ENST00000517261 64 ntBASIC-3.33□□□□□ -2.94
HLA-DMBP28068 RNU6-1117P-201ENST00000384525 104 ntBASIC-3.35□□□□□ -2.95
HLA-DMBP28068 MIR509-1-201ENST00000385265 94 ntBASIC-3.35□□□□□ -2.95
HLA-DMBP28068 MIR509-2-201ENST00000390724 91 ntBASIC-3.35□□□□□ -2.95
HLA-DMBP28068 RNU6-1154P-201ENST00000391001 104 ntBASIC-3.36□□□□□ -2.95
HLA-DMBP28068 AC090425.1-201ENST00000610007 140 ntBASIC-3.36□□□□□ -2.95
HLA-DMBP28068 RNU6-742P-201ENST00000365289 107 ntBASIC-3.38□□□□□ -2.95
HLA-DMBP28068 RNU6-1044P-201ENST00000384755 107 ntBASIC-3.38□□□□□ -2.95
HLA-DMBP28068 RNU6-209P-201ENST00000384118 107 ntBASIC-3.39□□□□□ -2.95
HLA-DMBP28068 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-3.39□□□□□ -2.95
HLA-DMBP28068 RNU6-663P-201ENST00000391105 106 ntBASIC-3.39□□□□□ -2.95
HLA-DMBP28068 RNU6-822P-201ENST00000362707 106 ntBASIC-3.4□□□□□ -2.95
HLA-DMBP28068 RNU6-147P-201ENST00000383983 107 ntBASIC-3.4□□□□□ -2.95
HLA-DMBP28068 RNU6-634P-201ENST00000459134 106 ntBASIC-3.4□□□□□ -2.95
HLA-DMBP28068 RNU6-313P-201ENST00000516317 112 ntBASIC-3.4□□□□□ -2.95
HLA-DMBP28068 RNU6-419P-201ENST00000517030 63 ntBASIC-3.4□□□□□ -2.95
HLA-DMBP28068 SNORA25.4-201ENST00000363666 124 ntBASIC-3.41□□□□□ -2.96
HLA-DMBP28068 Y_RNA.652-201ENST00000458902 102 ntBASIC-3.41□□□□□ -2.96
HLA-DMBP28068 SNORD114-13-201ENST00000364377 74 ntBASIC-3.42□□□□□ -2.96
HLA-DMBP28068 RNU6-1131P-201ENST00000364955 107 ntBASIC-3.42□□□□□ -2.96
HLA-DMBP28068 RNU6-49P-201ENST00000384256 107 ntBASIC-3.42□□□□□ -2.96
HLA-DMBP28068 Y_RNA.663-201ENST00000516043 101 ntBASIC-3.42□□□□□ -2.96
HLA-DMBP28068 AC099654.10-201ENST00000640395 161 ntBASIC-3.42□□□□□ -2.96
HLA-DMBP28068 RNU6-737P-201ENST00000365370 107 ntBASIC-3.43□□□□□ -2.96
HLA-DMBP28068 MIR4719-201ENST00000585233 84 ntBASIC-3.43□□□□□ -2.96
HLA-DMBP28068 MIR4666B-201ENST00000578142 81 ntBASIC-3.44□□□□□ -2.96
HLA-DMBP28068 RNU6-940P-201ENST00000363433 104 ntBASIC-3.46□□□□□ -2.96
HLA-DMBP28068 RNU6-242P-201ENST00000384359 107 ntBASIC-3.46□□□□□ -2.96
HLA-DMBP28068 RNA5SP106-201ENST00000517274 100 ntBASIC-3.46□□□□□ -2.96
HLA-DMBP28068 Y_RNA.43-201ENST00000362670 111 ntBASIC-3.47□□□□□ -2.96
HLA-DMBP28068 RNU6-987P-201ENST00000384759 104 ntBASIC-3.47□□□□□ -2.96
HLA-DMBP28068 Y_RNA.382-201ENST00000365672 114 ntBASIC-3.48□□□□□ -2.97
HLA-DMBP28068 U7.4-201ENST00000614961 63 ntBASIC-3.48□□□□□ -2.97
HLA-DMBP28068 RNU6-1276P-201ENST00000365372 104 ntBASIC-3.49□□□□□ -2.97
HLA-DMBP28068 RNY4P10-201ENST00000365571 96 ntBASIC-3.49□□□□□ -2.97
HLA-DMBP28068 AC139453.2-201ENST00000487255 133 ntBASIC-3.5□□□□□ -2.97
HLA-DMBP28068 AC062037.1-201ENST00000605302 128 ntBASIC-3.5□□□□□ -2.97
HLA-DMBP28068 MIR3938-201ENST00000582157 103 ntBASIC-3.51□□□□□ -2.97
HLA-DMBP28068 MIR4511-201ENST00000582784 87 ntBASIC-3.51□□□□□ -2.97
HLA-DMBP28068 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-3.52□□□□□ -2.97
HLA-DMBP28068 MIR656-201ENST00000385224 78 ntBASIC-3.53□□□□□ -2.97
HLA-DMBP28068 Y_RNA.657-201ENST00000515983 102 ntBASIC-3.53□□□□□ -2.97
HLA-DMBP28068 AC103706.3-201ENST00000636297 85 ntBASIC-3.54□□□□□ -2.98
HLA-DMBP28068 RNU6-854P-201ENST00000364036 107 ntBASIC-3.56□□□□□ -2.98
HLA-DMBP28068 SNORD30.1-201ENST00000391309 70 ntBASIC-3.56□□□□□ -2.98
HLA-DMBP28068 MIR494-201ENST00000349529 81 ntBASIC-3.57□□□□□ -2.98
HLA-DMBP28068 RNA5SP224-201ENST00000365069 126 ntBASIC-3.57□□□□□ -2.98
HLA-DMBP28068 RNU6-787P-201ENST00000384032 107 ntBASIC-3.57□□□□□ -2.98
HLA-DMBP28068 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-3.57□□□□□ -2.98
HLA-DMBP28068 Y_RNA.260-201ENST00000364628 101 ntBASIC-3.59□□□□□ -2.98
HLA-DMBP28068 MIR450A2-201ENST00000385022 100 ntBASIC-3.59□□□□□ -2.98
HLA-DMBP28068 SNORD115-45-201ENST00000391078 81 ntBASIC-3.61□□□□□ -2.99
HLA-DMBP28068 Y_RNA.206-201ENST00000364136 102 ntBASIC-3.62□□□□□ -2.99
HLA-DMBP28068 SNORD45C-201ENST00000383893 79 ntBASIC-3.62□□□□□ -2.99
HLA-DMBP28068 RNU6-1340P-201ENST00000384438 107 ntBASIC-3.62□□□□□ -2.99
HLA-DMBP28068 Y_RNA.545-201ENST00000384652 105 ntBASIC-3.62□□□□□ -2.99
HLA-DMBP28068 RNU6-1161P-201ENST00000516176 102 ntBASIC-3.62□□□□□ -2.99
HLA-DMBP28068 RNA5SP89-201ENST00000410300 108 ntBASIC-3.63□□□□□ -2.99
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms