Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 RNU6-68P-201ENST00000516576 104 ntBASIC-2.36□□□□□ -2.79
USF1P22415 RNU6-49P-201ENST00000384256 107 ntBASIC-2.37□□□□□ -2.79
USF1P22415 SNORD116.2-201ENST00000391251 93 ntBASIC-2.37□□□□□ -2.79
USF1P22415 MIR5693-201ENST00000577722 73 ntBASIC-2.37□□□□□ -2.79
USF1P22415 SNORA40B-201ENST00000385573 128 ntBASIC-2.38□□□□□ -2.79
USF1P22415 snosnR66.1-201ENST00000391095 99 ntBASIC-2.38□□□□□ -2.79
USF1P22415 RNU6-530P-201ENST00000391180 107 ntBASIC-2.38□□□□□ -2.79
USF1P22415 RNU6-1015P-201ENST00000517121 99 ntBASIC-2.38□□□□□ -2.79
USF1P22415 RNU6-1277P-201ENST00000364561 107 ntBASIC-2.39□□□□□ -2.79
USF1P22415 RNU6-1131P-201ENST00000364955 107 ntBASIC-2.39□□□□□ -2.79
USF1P22415 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.39□□□□□ -2.79
USF1P22415 Y_RNA.59-201ENST00000362828 102 ntBASIC-2.4□□□□□ -2.79
USF1P22415 SNORA40.16-201ENST00000517238 121 ntBASIC-2.4□□□□□ -2.79
USF1P22415 Y_RNA.434-201ENST00000384090 100 ntBASIC-2.42□□□□□ -2.8
USF1P22415 MIR548AJ2-201ENST00000408539 92 ntBASIC-2.42□□□□□ -2.8
USF1P22415 Y_RNA.79-201ENST00000362992 113 ntBASIC-2.43□□□□□ -2.8
USF1P22415 RNU6-122P-201ENST00000516818 107 ntBASIC-2.43□□□□□ -2.8
USF1P22415 MIR1254-1-201ENST00000408257 97 ntBASIC-2.45□□□□□ -2.8
USF1P22415 AL451105.1-201ENST00000450005 189 ntBASIC-2.45□□□□□ -2.8
USF1P22415 MIR379-201ENST00000362218 67 ntBASIC-2.46□□□□□ -2.8
USF1P22415 Y_RNA.63-201ENST00000362841 102 ntBASIC-2.46□□□□□ -2.8
USF1P22415 RNU6-1079P-201ENST00000362861 110 ntBASIC-2.46□□□□□ -2.8
USF1P22415 SNORA25.5-201ENST00000363782 126 ntBASIC-2.46□□□□□ -2.8
USF1P22415 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.46□□□□□ -2.8
USF1P22415 RNU6-411P-201ENST00000384451 107 ntBASIC-2.46□□□□□ -2.8
USF1P22415 MIR4666B-201ENST00000578142 81 ntBASIC-2.46□□□□□ -2.8
USF1P22415 AL731768.1-201ENST00000603124 139 ntBASIC-2.46□□□□□ -2.8
USF1P22415 MIR4426-201ENST00000640330 63 ntBASIC-2.46□□□□□ -2.8
USF1P22415 Y_RNA.134-201ENST00000363435 105 ntBASIC-2.47□□□□□ -2.8
USF1P22415 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.47□□□□□ -2.8
USF1P22415 RNY4P25-201ENST00000459254 96 ntBASIC-2.47□□□□□ -2.8
USF1P22415 Y_RNA.186-201ENST00000363899 92 ntBASIC-2.48□□□□□ -2.81
USF1P22415 SNORD113-1-201ENST00000365321 69 ntBASIC-2.49□□□□□ -2.81
USF1P22415 RNU6-634P-201ENST00000459134 106 ntBASIC-2.49□□□□□ -2.81
USF1P22415 SNORD45.2-201ENST00000363552 72 ntBASIC-2.5□□□□□ -2.81
USF1P22415 RNU6-215P-201ENST00000365169 102 ntBASIC-2.5□□□□□ -2.81
USF1P22415 RNU6-1276P-201ENST00000365372 104 ntBASIC-2.5□□□□□ -2.81
USF1P22415 MIR548M-201ENST00000408260 86 ntBASIC-2.5□□□□□ -2.81
USF1P22415 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.51□□□□□ -2.81
USF1P22415 RNU6-590P-201ENST00000365039 107 ntBASIC-2.51□□□□□ -2.81
USF1P22415 RNU6-787P-201ENST00000384032 107 ntBASIC-2.51□□□□□ -2.81
USF1P22415 RNU6-663P-201ENST00000391105 106 ntBASIC-2.51□□□□□ -2.81
USF1P22415 RNU7-119P-201ENST00000459279 63 ntBASIC-2.51□□□□□ -2.81
USF1P22415 MIR3910-1-201ENST00000580936 111 ntBASIC-2.51□□□□□ -2.81
USF1P22415 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-2.51□□□□□ -2.81
USF1P22415 MIR494-201ENST00000349529 81 ntBASIC-2.52□□□□□ -2.81
USF1P22415 MIRLET7A3-201ENST00000362116 74 ntBASIC-2.52□□□□□ -2.81
USF1P22415 RNA5SP89-201ENST00000410300 108 ntBASIC-2.52□□□□□ -2.81
USF1P22415 RNU6-300P-201ENST00000459080 104 ntBASIC-2.52□□□□□ -2.81
USF1P22415 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-2.52□□□□□ -2.81
USF1P22415 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-2.52□□□□□ -2.81
USF1P22415 SNORA25.4-201ENST00000363666 124 ntBASIC-2.53□□□□□ -2.81
USF1P22415 Y_RNA.320-201ENST00000365144 102 ntBASIC-2.53□□□□□ -2.81
USF1P22415 RNU6-242P-201ENST00000384359 107 ntBASIC-2.53□□□□□ -2.81
USF1P22415 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-2.53□□□□□ -2.81
USF1P22415 RNU6-803P-201ENST00000516034 102 ntBASIC-2.53□□□□□ -2.81
USF1P22415 RNU6-919P-201ENST00000516731 104 ntBASIC-2.53□□□□□ -2.81
USF1P22415 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-2.53□□□□□ -2.81
USF1P22415 SNORD20-201ENST00000384550 80 ntBASIC-2.54□□□□□ -2.82
USF1P22415 RNU6-176P-201ENST00000517196 105 ntBASIC-2.54□□□□□ -2.82
USF1P22415 RNU6-800P-201ENST00000384473 103 ntBASIC-2.55□□□□□ -2.82
USF1P22415 MT-TR-201ENST00000387439 65 ntBASIC-2.55□□□□□ -2.82
USF1P22415 Y_RNA.658-201ENST00000515990 97 ntBASIC-2.55□□□□□ -2.82
USF1P22415 MIR3668-201ENST00000582138 75 ntBASIC-2.55□□□□□ -2.82
USF1P22415 U7.4-201ENST00000614961 63 ntBASIC-2.56□□□□□ -2.82
USF1P22415 Y_RNA.830-201ENST00000628531 96 ntBASIC-2.56□□□□□ -2.82
USF1P22415 RNU6-1124P-201ENST00000384169 107 ntBASIC-2.57□□□□□ -2.82
USF1P22415 MIR450A2-201ENST00000385022 100 ntBASIC-2.58□□□□□ -2.82
USF1P22415 RNU6-419P-201ENST00000517030 63 ntBASIC-2.59□□□□□ -2.82
USF1P22415 RNU6-742P-201ENST00000365289 107 ntBASIC-2.6□□□□□ -2.83
USF1P22415 RNU6-1169P-201ENST00000363537 103 ntBASIC-2.61□□□□□ -2.83
USF1P22415 RNY4P30-201ENST00000410216 95 ntBASIC-2.61□□□□□ -2.83
USF1P22415 MIR3671-201ENST00000580455 88 ntBASIC-2.61□□□□□ -2.83
USF1P22415 MIR4511-201ENST00000582784 87 ntBASIC-2.61□□□□□ -2.83
USF1P22415 RNU6-1044P-201ENST00000384755 107 ntBASIC-2.62□□□□□ -2.83
USF1P22415 RNU6-345P-201ENST00000517001 107 ntBASIC-2.62□□□□□ -2.83
USF1P22415 RNU6-940P-201ENST00000363433 104 ntBASIC-2.63□□□□□ -2.83
USF1P22415 RNU6-44P-201ENST00000384045 107 ntBASIC-2.63□□□□□ -2.83
USF1P22415 Y_RNA.652-201ENST00000458902 102 ntBASIC-2.63□□□□□ -2.83
USF1P22415 Y_RNA.266-201ENST00000364678 96 ntBASIC-2.64□□□□□ -2.83
USF1P22415 SNORD30.1-201ENST00000391309 70 ntBASIC-2.64□□□□□ -2.83
USF1P22415 Y_RNA.612-201ENST00000410717 95 ntBASIC-2.64□□□□□ -2.83
USF1P22415 MIR3938-201ENST00000582157 103 ntBASIC-2.64□□□□□ -2.83
USF1P22415 AL359920.1-201ENST00000618332 176 ntBASIC-2.64□□□□□ -2.83
USF1P22415 Y_RNA.545-201ENST00000384652 105 ntBASIC-2.65□□□□□ -2.83
USF1P22415 SNORD114-13-201ENST00000364377 74 ntBASIC-2.66□□□□□ -2.84
USF1P22415 AC103706.3-201ENST00000636297 85 ntBASIC-2.66□□□□□ -2.84
USF1P22415 RNU6-153P-201ENST00000364422 104 ntBASIC-2.67□□□□□ -2.84
USF1P22415 RNU6-1121P-201ENST00000516802 109 ntBASIC-2.67□□□□□ -2.84
USF1P22415 RNU6-294P-201ENST00000364999 102 ntBASIC-2.68□□□□□ -2.84
USF1P22415 Y_RNA.511-201ENST00000384514 103 ntBASIC-2.68□□□□□ -2.84
USF1P22415 MIR509-1-201ENST00000385265 94 ntBASIC-2.68□□□□□ -2.84
USF1P22415 MIR509-2-201ENST00000390724 91 ntBASIC-2.68□□□□□ -2.84
USF1P22415 U6.111-201ENST00000636093 83 ntBASIC-2.68□□□□□ -2.84
USF1P22415 AL606753.1-201ENST00000427435 87 ntBASIC-2.69□□□□□ -2.84
USF1P22415 Y_RNA.663-201ENST00000516043 101 ntBASIC-2.69□□□□□ -2.84
USF1P22415 RNU6-737P-201ENST00000365370 107 ntBASIC-2.7□□□□□ -2.84
USF1P22415 RNU6-820P-201ENST00000384273 107 ntBASIC-2.7□□□□□ -2.84
USF1P22415 Y_RNA.566-201ENST00000384735 101 ntBASIC-2.71□□□□□ -2.84
USF1P22415 RNU6-871P-201ENST00000516122 100 ntBASIC-2.72□□□□□ -2.84
Retrieved 100 of 98,524 protein–RNA pairs in 197.7 ms