Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 MIR7110-201ENST00000612638 86 ntBASIC-1.51□□□□□ -2.65
CDH3P22223 RNU6-776P-201ENST00000364403 104 ntBASIC-1.52□□□□□ -2.65
CDH3P22223 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.52□□□□□ -2.65
CDH3P22223 RNU6-520P-201ENST00000384717 104 ntBASIC-1.52□□□□□ -2.65
CDH3P22223 RNU6-122P-201ENST00000516818 107 ntBASIC-1.52□□□□□ -2.65
CDH3P22223 RNU6-980P-201ENST00000516925 103 ntBASIC-1.52□□□□□ -2.65
CDH3P22223 MIR664B-201ENST00000626756 61 ntBASIC-1.52□□□□□ -2.65
CDH3P22223 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.53□□□□□ -2.65
CDH3P22223 Y_RNA.685-201ENST00000516532 108 ntBASIC-1.53□□□□□ -2.65
CDH3P22223 RNU7-160P-201ENST00000516660 62 ntBASIC-1.53□□□□□ -2.65
CDH3P22223 MIR4511-201ENST00000582784 87 ntBASIC-1.53□□□□□ -2.65
CDH3P22223 MIR4662A-201ENST00000637499 67 ntBASIC-1.54□□□□□ -2.66
CDH3P22223 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.55□□□□□ -2.66
CDH3P22223 MIR548N-201ENST00000408742 75 ntBASIC-1.55□□□□□ -2.66
CDH3P22223 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.55□□□□□ -2.66
CDH3P22223 RNU6-68P-201ENST00000516576 104 ntBASIC-1.55□□□□□ -2.66
CDH3P22223 AC103706.3-201ENST00000636297 85 ntBASIC-1.55□□□□□ -2.66
CDH3P22223 RNU6-828P-201ENST00000364876 107 ntBASIC-1.56□□□□□ -2.66
CDH3P22223 SNORA40B-201ENST00000385573 128 ntBASIC-1.56□□□□□ -2.66
CDH3P22223 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.56□□□□□ -2.66
CDH3P22223 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.57□□□□□ -2.66
CDH3P22223 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.58□□□□□ -2.66
CDH3P22223 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.58□□□□□ -2.66
CDH3P22223 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.58□□□□□ -2.66
CDH3P22223 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.58□□□□□ -2.66
CDH3P22223 SNORD18C-201ENST00000362704 69 ntBASIC-1.59□□□□□ -2.66
CDH3P22223 RNU6-800P-201ENST00000384473 103 ntBASIC-1.59□□□□□ -2.66
CDH3P22223 RNU6-530P-201ENST00000391180 107 ntBASIC-1.59□□□□□ -2.66
CDH3P22223 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.59□□□□□ -2.66
CDH3P22223 RNU6-361P-201ENST00000364454 107 ntBASIC-1.6□□□□□ -2.67
CDH3P22223 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.6□□□□□ -2.67
CDH3P22223 SNORA17.4-201ENST00000391287 132 ntBASIC-1.6□□□□□ -2.67
CDH3P22223 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.61□□□□□ -2.67
CDH3P22223 RNU6-1275P-201ENST00000391087 107 ntBASIC-1.61□□□□□ -2.67
CDH3P22223 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.63□□□□□ -2.67
CDH3P22223 RNA5SP405-201ENST00000363059 114 ntBASIC-1.64□□□□□ -2.67
CDH3P22223 RNU6-940P-201ENST00000363433 104 ntBASIC-1.64□□□□□ -2.67
CDH3P22223 SNORD113-3-201ENST00000364830 72 ntBASIC-1.64□□□□□ -2.67
CDH3P22223 RNU6-742P-201ENST00000365289 107 ntBASIC-1.64□□□□□ -2.67
CDH3P22223 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.64□□□□□ -2.67
CDH3P22223 SNORD60-201ENST00000383903 83 ntBASIC-1.64□□□□□ -2.67
CDH3P22223 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.64□□□□□ -2.67
CDH3P22223 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.64□□□□□ -2.67
CDH3P22223 RNU6-912P-201ENST00000363800 104 ntBASIC-1.65□□□□□ -2.67
CDH3P22223 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.66□□□□□ -2.68
CDH3P22223 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.66□□□□□ -2.68
CDH3P22223 AL451105.1-201ENST00000450005 189 ntBASIC-1.66□□□□□ -2.68
CDH3P22223 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.66□□□□□ -2.68
CDH3P22223 MIR4426-201ENST00000640330 63 ntBASIC-1.66□□□□□ -2.68
CDH3P22223 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.67□□□□□ -2.68
CDH3P22223 RNU7-119P-201ENST00000459279 63 ntBASIC-1.67□□□□□ -2.68
CDH3P22223 RNU6-118P-201ENST00000516552 102 ntBASIC-1.67□□□□□ -2.68
CDH3P22223 AC097484.2-201ENST00000509147 251 ntBASIC-1.68□□□□□ -2.68
CDH3P22223 Y_RNA.386-201ENST00000383913 105 ntBASIC-1.69□□□□□ -2.68
CDH3P22223 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.7□□□□□ -2.68
CDH3P22223 AC110620.1-201ENST00000416042 228 ntBASIC-1.7□□□□□ -2.68
CDH3P22223 RNU6-419P-201ENST00000517030 63 ntBASIC-1.7□□□□□ -2.68
CDH3P22223 MIR466-201ENST00000580653 84 ntBASIC-1.7□□□□□ -2.68
CDH3P22223 MIR3938-201ENST00000582157 103 ntBASIC-1.7□□□□□ -2.68
CDH3P22223 RNU6-194P-201ENST00000363862 105 ntBASIC-1.71□□□□□ -2.68
CDH3P22223 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.71□□□□□ -2.68
CDH3P22223 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.71□□□□□ -2.68
CDH3P22223 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.71□□□□□ -2.68
CDH3P22223 MIR4748-201ENST00000578076 82 ntBASIC-1.71□□□□□ -2.68
CDH3P22223 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.71□□□□□ -2.68
CDH3P22223 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.71□□□□□ -2.68
CDH3P22223 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.71□□□□□ -2.68
CDH3P22223 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.71□□□□□ -2.68
CDH3P22223 RNU6-590P-201ENST00000365039 107 ntBASIC-1.72□□□□□ -2.68
CDH3P22223 MIR3139-201ENST00000579145 76 ntBASIC-1.72□□□□□ -2.68
CDH3P22223 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.72□□□□□ -2.68
CDH3P22223 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.73□□□□□ -2.69
CDH3P22223 AC114801.3-201ENST00000510231 177 ntBASIC-1.73□□□□□ -2.69
CDH3P22223 SNORA72.7-201ENST00000516349 94 ntBASIC-1.73□□□□□ -2.69
CDH3P22223 FTX_4.1-201ENST00000616291 147 ntBASIC-1.73□□□□□ -2.69
CDH3P22223 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.74□□□□□ -2.69
CDH3P22223 RNU6-300P-201ENST00000459080 104 ntBASIC-1.74□□□□□ -2.69
CDH3P22223 RNU6-446P-201ENST00000362827 106 ntBASIC-1.75□□□□□ -2.69
CDH3P22223 RNU6-141P-201ENST00000410499 105 ntBASIC-1.75□□□□□ -2.69
CDH3P22223 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.75□□□□□ -2.69
CDH3P22223 RNU6-471P-201ENST00000383944 106 ntBASIC-1.76□□□□□ -2.69
CDH3P22223 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.76□□□□□ -2.69
CDH3P22223 MIR1254-1-201ENST00000408257 97 ntBASIC-1.77□□□□□ -2.69
CDH3P22223 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.79□□□□□ -2.7
CDH3P22223 MIR379-201ENST00000362218 67 ntBASIC-1.8□□□□□ -2.7
CDH3P22223 RNU6-1169P-201ENST00000363537 103 ntBASIC-1.81□□□□□ -2.7
CDH3P22223 SNORD113-4-201ENST00000364802 75 ntBASIC-1.81□□□□□ -2.7
CDH3P22223 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.82□□□□□ -2.7
CDH3P22223 SNORD45.2-201ENST00000363552 72 ntBASIC-1.82□□□□□ -2.7
CDH3P22223 MT-TM-201ENST00000387377 68 ntBASIC-1.82□□□□□ -2.7
CDH3P22223 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.83□□□□□ -2.7
CDH3P22223 MIR548X-201ENST00000580069 75 ntBASIC-1.83□□□□□ -2.7
CDH3P22223 Y_RNA.63-201ENST00000362841 102 ntBASIC-1.84□□□□□ -2.7
CDH3P22223 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.84□□□□□ -2.7
CDH3P22223 MIR496-201ENST00000385226 102 ntBASIC-1.84□□□□□ -2.7
CDH3P22223 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.84□□□□□ -2.7
CDH3P22223 RNU6-119P-201ENST00000364882 107 ntBASIC-1.85□□□□□ -2.71
CDH3P22223 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.85□□□□□ -2.71
CDH3P22223 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.86□□□□□ -2.71
CDH3P22223 RNU6-638P-201ENST00000516582 104 ntBASIC-1.86□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms