Protein–RNA interactions for Protein: P05556

ITGB1, Integrin beta-1, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1P05556 MIR601-201ENST00000385256 79 ntBASIC-0.57□□□□□ -2.5
ITGB1P05556 MIR4499-201ENST00000584834 69 ntBASIC-0.57□□□□□ -2.5
ITGB1P05556 uc_338.19-201ENST00000616808 99 ntBASIC-0.57□□□□□ -2.5
ITGB1P05556 MIR198-201ENST00000637333 62 ntBASIC-0.57□□□□□ -2.5
ITGB1P05556 RNU6-164P-201ENST00000364604 103 ntBASIC-0.58□□□□□ -2.5
ITGB1P05556 MIR581-201ENST00000384895 96 ntBASIC-0.58□□□□□ -2.5
ITGB1P05556 MIR8485-201ENST00000401372 91 ntBASIC-0.58□□□□□ -2.5
ITGB1P05556 AC018880.2-201ENST00000414265 201 ntBASIC-0.58□□□□□ -2.5
ITGB1P05556 AC091912.2-201ENST00000624798 167 ntBASIC-0.58□□□□□ -2.5
ITGB1P05556 RNU6-300P-201ENST00000459080 104 ntBASIC-0.6□□□□□ -2.51
ITGB1P05556 RNU6-576P-201ENST00000390854 102 ntBASIC-0.61□□□□□ -2.51
ITGB1P05556 MIR548N-201ENST00000408742 75 ntBASIC-0.61□□□□□ -2.51
ITGB1P05556 MIR548H4-201ENST00000408689 111 ntBASIC-0.62□□□□□ -2.51
ITGB1P05556 Y_RNA.223-201ENST00000364290 113 ntBASIC-0.63□□□□□ -2.51
ITGB1P05556 SNORD83B-201ENST00000386745 93 ntBASIC-0.63□□□□□ -2.51
ITGB1P05556 MIR4320-201ENST00000636981 65 ntBASIC-0.64□□□□□ -2.51
ITGB1P05556 MIR4317-201ENST00000637586 65 ntBASIC-0.64□□□□□ -2.51
ITGB1P05556 RNU6-79P-201ENST00000362511 107 ntBASIC-0.65□□□□□ -2.51
ITGB1P05556 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.65□□□□□ -2.51
ITGB1P05556 RNU6-1047P-201ENST00000364418 107 ntBASIC-0.66□□□□□ -2.52
ITGB1P05556 SNORD18C-201ENST00000362704 69 ntBASIC-0.67□□□□□ -2.52
ITGB1P05556 RNU6-10P-201ENST00000384036 107 ntBASIC-0.67□□□□□ -2.52
ITGB1P05556 MIR6738-201ENST00000619620 64 ntBASIC-0.67□□□□□ -2.52
ITGB1P05556 Y_RNA.129-201ENST00000363392 110 ntBASIC-0.68□□□□□ -2.52
ITGB1P05556 RNU6-822P-201ENST00000362707 106 ntBASIC-0.7□□□□□ -2.52
ITGB1P05556 RNU6-695P-201ENST00000391157 104 ntBASIC-0.7□□□□□ -2.52
ITGB1P05556 RNU6-400P-201ENST00000391173 106 ntBASIC-0.7□□□□□ -2.52
ITGB1P05556 MIR378F-201ENST00000578143 78 ntBASIC-0.7□□□□□ -2.52
ITGB1P05556 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.71□□□□□ -2.52
ITGB1P05556 MIR1207-201ENST00000408249 87 ntBASIC-0.71□□□□□ -2.52
ITGB1P05556 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.71□□□□□ -2.52
ITGB1P05556 SCARNA17-201ENST00000516183 144 ntBASIC-0.71□□□□□ -2.52
ITGB1P05556 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.71□□□□□ -2.52
ITGB1P05556 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.71□□□□□ -2.52
ITGB1P05556 MIR379-201ENST00000362218 67 ntBASIC-0.72□□□□□ -2.52
ITGB1P05556 Y_RNA.320-201ENST00000365144 102 ntBASIC-0.72□□□□□ -2.52
ITGB1P05556 RNU6-68P-201ENST00000516576 104 ntBASIC-0.72□□□□□ -2.52
ITGB1P05556 MIR4324-201ENST00000584846 72 ntBASIC-0.72□□□□□ -2.52
ITGB1P05556 U4.2-201ENST00000618561 85 ntBASIC-0.72□□□□□ -2.52
ITGB1P05556 RNU6-1326P-201ENST00000391262 107 ntBASIC-0.73□□□□□ -2.53
ITGB1P05556 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-0.74□□□□□ -2.53
ITGB1P05556 SNORD114-3-201ENST00000364969 75 ntBASIC-0.75□□□□□ -2.53
ITGB1P05556 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.75□□□□□ -2.53
ITGB1P05556 Y_RNA.345-201ENST00000365384 92 ntBASIC-0.77□□□□□ -2.53
ITGB1P05556 RNU6-59P-201ENST00000384787 107 ntBASIC-0.77□□□□□ -2.53
ITGB1P05556 RNU6-912P-201ENST00000363800 104 ntBASIC-0.78□□□□□ -2.53
ITGB1P05556 MIR548AJ2-201ENST00000408539 92 ntBASIC-0.78□□□□□ -2.53
ITGB1P05556 MIR4520-1-201ENST00000582609 70 ntBASIC-0.79□□□□□ -2.54
ITGB1P05556 MIR6502-201ENST00000617296 76 ntBASIC-0.79□□□□□ -2.54
ITGB1P05556 Y_RNA.382-201ENST00000365672 114 ntBASIC-0.81□□□□□ -2.54
ITGB1P05556 Y_RNA.449-201ENST00000384187 102 ntBASIC-0.81□□□□□ -2.54
ITGB1P05556 MIR3165-201ENST00000579874 75 ntBASIC-0.81□□□□□ -2.54
ITGB1P05556 MIR365A-201ENST00000362260 87 ntBASIC-0.82□□□□□ -2.54
ITGB1P05556 RNU6-1034P-201ENST00000365335 101 ntBASIC-0.82□□□□□ -2.54
ITGB1P05556 MIR3123-201ENST00000583417 75 ntBASIC-0.82□□□□□ -2.54
ITGB1P05556 SNORD19B.1-201ENST00000630615 80 ntBASIC-0.82□□□□□ -2.54
ITGB1P05556 snoU13.10-201ENST00000459301 103 ntBASIC-0.84□□□□□ -2.54
ITGB1P05556 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.84□□□□□ -2.54
ITGB1P05556 Y_RNA.206-201ENST00000364136 102 ntBASIC-0.85□□□□□ -2.55
ITGB1P05556 RNU6-1324P-201ENST00000384222 107 ntBASIC-0.85□□□□□ -2.55
ITGB1P05556 MIR487B-201ENST00000385021 84 ntBASIC-0.85□□□□□ -2.55
ITGB1P05556 Y_RNA.103-201ENST00000363171 102 ntBASIC-0.86□□□□□ -2.55
ITGB1P05556 RNU6-1169P-201ENST00000363537 103 ntBASIC-0.86□□□□□ -2.55
ITGB1P05556 SNORD115.2-201ENST00000391126 59 ntBASIC-0.86□□□□□ -2.55
ITGB1P05556 MIR548H1-201ENST00000408610 102 ntBASIC-0.86□□□□□ -2.55
ITGB1P05556 MIR548W-201ENST00000581970 74 ntBASIC-0.86□□□□□ -2.55
ITGB1P05556 MIR1285-2-201ENST00000408311 88 ntBASIC-0.87□□□□□ -2.55
ITGB1P05556 MIR3115-201ENST00000577915 68 ntBASIC-0.87□□□□□ -2.55
ITGB1P05556 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-0.87□□□□□ -2.55
ITGB1P05556 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-0.87□□□□□ -2.55
ITGB1P05556 Y_RNA.175-201ENST00000363794 111 ntBASIC-0.88□□□□□ -2.55
ITGB1P05556 MIR4441-201ENST00000582623 100 ntBASIC-0.88□□□□□ -2.55
ITGB1P05556 MIR4306-201ENST00000583390 91 ntBASIC-0.88□□□□□ -2.55
ITGB1P05556 Y_RNA.134-201ENST00000363435 105 ntBASIC-0.89□□□□□ -2.55
ITGB1P05556 MIR1254-1-201ENST00000408257 97 ntBASIC-0.89□□□□□ -2.55
ITGB1P05556 RNA5SP461-201ENST00000516451 104 ntBASIC-0.89□□□□□ -2.55
ITGB1P05556 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.9□□□□□ -2.55
ITGB1P05556 AC138207.3-201ENST00000585289 166 ntBASIC-0.91□□□□□ -2.56
ITGB1P05556 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-0.91□□□□□ -2.56
ITGB1P05556 Y_RNA.434-201ENST00000384090 100 ntBASIC-0.92□□□□□ -2.56
ITGB1P05556 RNA5SP180-201ENST00000516181 101 ntBASIC-0.92□□□□□ -2.56
ITGB1P05556 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.93□□□□□ -2.56
ITGB1P05556 SNORD113-3-201ENST00000364830 72 ntBASIC-0.94□□□□□ -2.56
ITGB1P05556 Y_RNA.349-201ENST00000365406 102 ntBASIC-0.94□□□□□ -2.56
ITGB1P05556 RNU6-841P-201ENST00000383872 107 ntBASIC-0.94□□□□□ -2.56
ITGB1P05556 RNA5SP86-201ENST00000390869 98 ntBASIC-0.94□□□□□ -2.56
ITGB1P05556 FTX_4.1-201ENST00000616291 147 ntBASIC-0.94□□□□□ -2.56
ITGB1P05556 MIR548AM-201ENST00000584298 74 ntBASIC-0.95□□□□□ -2.56
ITGB1P05556 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.95□□□□□ -2.56
ITGB1P05556 MIRLET7A2-201ENST00000362105 72 ntBASIC-0.96□□□□□ -2.56
ITGB1P05556 MIR5591-201ENST00000578248 65 ntBASIC-0.96□□□□□ -2.56
ITGB1P05556 U6.103-201ENST00000637085 61 ntBASIC-0.96□□□□□ -2.56
ITGB1P05556 RNU6-706P-201ENST00000517229 104 ntBASIC-0.97□□□□□ -2.56
ITGB1P05556 RNU6-226P-201ENST00000363778 107 ntBASIC-0.98□□□□□ -2.57
ITGB1P05556 HLA-S-202ENST00000425174 53 ntBASIC-0.98□□□□□ -2.57
ITGB1P05556 RNA5SP224-201ENST00000365069 126 ntBASIC-0.99□□□□□ -2.57
ITGB1P05556 RNU6-724P-201ENST00000390958 105 ntBASIC-0.99□□□□□ -2.57
ITGB1P05556 Y_RNA.260-201ENST00000364628 101 ntBASIC-1□□□□□ -2.57
ITGB1P05556 RNU6-836P-201ENST00000362920 107 ntBASIC-1.01□□□□□ -2.57
ITGB1P05556 RNY4P27-201ENST00000363341 96 ntBASIC-1.01□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 250 ms