Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 MT-TR-201ENST00000387439 65 ntBASIC-2.9□□□□□ -2.87
UPK1BO75841 SNORD113-3-201ENST00000364830 72 ntBASIC-2.91□□□□□ -2.88
UPK1BO75841 Y_RNA.629-201ENST00000411368 105 ntBASIC-2.91□□□□□ -2.88
UPK1BO75841 MIR548N-201ENST00000408742 75 ntBASIC-2.93□□□□□ -2.88
UPK1BO75841 MIR3910-1-201ENST00000580936 111 ntBASIC-2.93□□□□□ -2.88
UPK1BO75841 Y_RNA.59-201ENST00000362828 102 ntBASIC-2.94□□□□□ -2.88
UPK1BO75841 MIR5693-201ENST00000577722 73 ntBASIC-2.94□□□□□ -2.88
UPK1BO75841 MIR3671-201ENST00000580455 88 ntBASIC-2.94□□□□□ -2.88
UPK1BO75841 SNORA17.4-201ENST00000391287 132 ntBASIC-2.95□□□□□ -2.88
UPK1BO75841 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.95□□□□□ -2.88
UPK1BO75841 MIR494-201ENST00000349529 81 ntBASIC-2.96□□□□□ -2.88
UPK1BO75841 RNU6-242P-201ENST00000384359 107 ntBASIC-2.97□□□□□ -2.88
UPK1BO75841 SNORD20-201ENST00000384550 80 ntBASIC-2.97□□□□□ -2.88
UPK1BO75841 RNU6-215P-201ENST00000365169 102 ntBASIC-2.98□□□□□ -2.89
UPK1BO75841 RNU6-919P-201ENST00000516731 104 ntBASIC-2.98□□□□□ -2.89
UPK1BO75841 RNU6-411P-201ENST00000384451 107 ntBASIC-2.99□□□□□ -2.89
UPK1BO75841 SNORA40B-201ENST00000385573 128 ntBASIC-2.99□□□□□ -2.89
UPK1BO75841 RNU6-530P-201ENST00000391180 107 ntBASIC-2.99□□□□□ -2.89
UPK1BO75841 RNA5SP89-201ENST00000410300 108 ntBASIC-2.99□□□□□ -2.89
UPK1BO75841 Y_RNA.658-201ENST00000515990 97 ntBASIC-2.99□□□□□ -2.89
UPK1BO75841 RNU6-803P-201ENST00000516034 102 ntBASIC-2.99□□□□□ -2.89
UPK1BO75841 RNU6-361P-201ENST00000364454 107 ntBASIC-3□□□□□ -2.89
UPK1BO75841 RNU6-1276P-201ENST00000365372 104 ntBASIC-3□□□□□ -2.89
UPK1BO75841 RNU6-1324P-201ENST00000384222 107 ntBASIC-3□□□□□ -2.89
UPK1BO75841 RNU6-1015P-201ENST00000517121 99 ntBASIC-3□□□□□ -2.89
UPK1BO75841 RNY4P30-201ENST00000410216 95 ntBASIC-3.01□□□□□ -2.89
UPK1BO75841 RNU6-1296P-201ENST00000383879 107 ntBASIC-3.02□□□□□ -2.89
UPK1BO75841 Y_RNA.79-201ENST00000362992 113 ntBASIC-3.03□□□□□ -2.89
UPK1BO75841 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-3.03□□□□□ -2.89
UPK1BO75841 MIR4666B-201ENST00000578142 81 ntBASIC-3.03□□□□□ -2.89
UPK1BO75841 SNORA25.5-201ENST00000363782 126 ntBASIC-3.04□□□□□ -2.9
UPK1BO75841 RNU6-1277P-201ENST00000364561 107 ntBASIC-3.04□□□□□ -2.9
UPK1BO75841 SNORD113-1-201ENST00000365321 69 ntBASIC-3.04□□□□□ -2.9
UPK1BO75841 RNY4P25-201ENST00000459254 96 ntBASIC-3.04□□□□□ -2.9
UPK1BO75841 Y_RNA.134-201ENST00000363435 105 ntBASIC-3.05□□□□□ -2.9
UPK1BO75841 RNU6-663P-201ENST00000391105 106 ntBASIC-3.05□□□□□ -2.9
UPK1BO75841 SNORA40.16-201ENST00000517238 121 ntBASIC-3.05□□□□□ -2.9
UPK1BO75841 RNU6-122P-201ENST00000516818 107 ntBASIC-3.06□□□□□ -2.9
UPK1BO75841 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-3.06□□□□□ -2.9
UPK1BO75841 RNU6-44P-201ENST00000384045 107 ntBASIC-3.07□□□□□ -2.9
UPK1BO75841 AL606753.1-201ENST00000427435 87 ntBASIC-3.07□□□□□ -2.9
UPK1BO75841 RNU6-634P-201ENST00000459134 106 ntBASIC-3.07□□□□□ -2.9
UPK1BO75841 MIR450A2-201ENST00000385022 100 ntBASIC-3.08□□□□□ -2.9
UPK1BO75841 U7.4-201ENST00000614961 63 ntBASIC-3.08□□□□□ -2.9
UPK1BO75841 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-3.09□□□□□ -2.9
UPK1BO75841 MIR4426-201ENST00000640330 63 ntBASIC-3.09□□□□□ -2.9
UPK1BO75841 SNORD45.2-201ENST00000363552 72 ntBASIC-3.1□□□□□ -2.91
UPK1BO75841 RNU7-119P-201ENST00000459279 63 ntBASIC-3.1□□□□□ -2.91
UPK1BO75841 Y_RNA.830-201ENST00000628531 96 ntBASIC-3.1□□□□□ -2.91
UPK1BO75841 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-3.1□□□□□ -2.91
UPK1BO75841 RNU6-787P-201ENST00000384032 107 ntBASIC-3.11□□□□□ -2.91
UPK1BO75841 AL451105.1-201ENST00000450005 189 ntBASIC-3.11□□□□□ -2.91
UPK1BO75841 AL731768.1-201ENST00000603124 139 ntBASIC-3.11□□□□□ -2.91
UPK1BO75841 RNU6-912P-201ENST00000363800 104 ntBASIC-3.13□□□□□ -2.91
UPK1BO75841 MIRLET7A3-201ENST00000362116 74 ntBASIC-3.14□□□□□ -2.91
UPK1BO75841 MIR379-201ENST00000362218 67 ntBASIC-3.14□□□□□ -2.91
UPK1BO75841 SNORA25.4-201ENST00000363666 124 ntBASIC-3.14□□□□□ -2.91
UPK1BO75841 Y_RNA.566-201ENST00000384735 101 ntBASIC-3.14□□□□□ -2.91
UPK1BO75841 RNU6-1121P-201ENST00000516802 109 ntBASIC-3.14□□□□□ -2.91
UPK1BO75841 SNORD30.1-201ENST00000391309 70 ntBASIC-3.16□□□□□ -2.92
UPK1BO75841 RNU6-300P-201ENST00000459080 104 ntBASIC-3.16□□□□□ -2.92
UPK1BO75841 RNU6-294P-201ENST00000364999 102 ntBASIC-3.17□□□□□ -2.92
UPK1BO75841 RNU6-68P-201ENST00000516576 104 ntBASIC-3.17□□□□□ -2.92
UPK1BO75841 RNU6-590P-201ENST00000365039 107 ntBASIC-3.18□□□□□ -2.92
UPK1BO75841 Y_RNA.434-201ENST00000384090 100 ntBASIC-3.18□□□□□ -2.92
UPK1BO75841 MIR548AJ2-201ENST00000408539 92 ntBASIC-3.18□□□□□ -2.92
UPK1BO75841 Y_RNA.511-201ENST00000384514 103 ntBASIC-3.19□□□□□ -2.92
UPK1BO75841 Y_RNA.545-201ENST00000384652 105 ntBASIC-3.19□□□□□ -2.92
UPK1BO75841 Y_RNA.63-201ENST00000362841 102 ntBASIC-3.2□□□□□ -2.92
UPK1BO75841 RNU6-1047P-201ENST00000364418 107 ntBASIC-3.2□□□□□ -2.92
UPK1BO75841 MIR509-1-201ENST00000385265 94 ntBASIC-3.2□□□□□ -2.92
UPK1BO75841 MIR509-2-201ENST00000390724 91 ntBASIC-3.2□□□□□ -2.92
UPK1BO75841 Y_RNA.129-201ENST00000363392 110 ntBASIC-3.21□□□□□ -2.92
UPK1BO75841 Y_RNA.266-201ENST00000364678 96 ntBASIC-3.21□□□□□ -2.92
UPK1BO75841 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-3.21□□□□□ -2.92
UPK1BO75841 MIR1254-1-201ENST00000408257 97 ntBASIC-3.21□□□□□ -2.92
UPK1BO75841 RNU6-1044P-201ENST00000384755 107 ntBASIC-3.22□□□□□ -2.92
UPK1BO75841 RNU6-176P-201ENST00000517196 105 ntBASIC-3.22□□□□□ -2.92
UPK1BO75841 RNU6-940P-201ENST00000363433 104 ntBASIC-3.25□□□□□ -2.93
UPK1BO75841 RNU6-153P-201ENST00000364422 104 ntBASIC-3.26□□□□□ -2.93
UPK1BO75841 RNU6-820P-201ENST00000384273 107 ntBASIC-3.26□□□□□ -2.93
UPK1BO75841 RNU6-800P-201ENST00000384473 103 ntBASIC-3.26□□□□□ -2.93
UPK1BO75841 MIR4511-201ENST00000582784 87 ntBASIC-3.26□□□□□ -2.93
UPK1BO75841 Y_RNA.612-201ENST00000410717 95 ntBASIC-3.27□□□□□ -2.93
UPK1BO75841 RNA5SP106-201ENST00000517274 100 ntBASIC-3.27□□□□□ -2.93
UPK1BO75841 Y_RNA.320-201ENST00000365144 102 ntBASIC-3.28□□□□□ -2.93
UPK1BO75841 Y_RNA.694-201ENST00000516677 117 ntBASIC-3.28□□□□□ -2.93
UPK1BO75841 RNU6-419P-201ENST00000517030 63 ntBASIC-3.28□□□□□ -2.93
UPK1BO75841 MIR3938-201ENST00000582157 103 ntBASIC-3.29□□□□□ -2.94
UPK1BO75841 SNORD114-13-201ENST00000364377 74 ntBASIC-3.3□□□□□ -2.94
UPK1BO75841 RNU6-742P-201ENST00000365289 107 ntBASIC-3.3□□□□□ -2.94
UPK1BO75841 RNU6-871P-201ENST00000516122 100 ntBASIC-3.3□□□□□ -2.94
UPK1BO75841 AC062037.1-201ENST00000605302 128 ntBASIC-3.3□□□□□ -2.94
UPK1BO75841 RNU6-987P-201ENST00000384759 104 ntBASIC-3.31□□□□□ -2.94
UPK1BO75841 Y_RNA.652-201ENST00000458902 102 ntBASIC-3.31□□□□□ -2.94
UPK1BO75841 AL359920.1-201ENST00000618332 176 ntBASIC-3.31□□□□□ -2.94
UPK1BO75841 U6.111-201ENST00000636093 83 ntBASIC-3.31□□□□□ -2.94
UPK1BO75841 AC103706.3-201ENST00000636297 85 ntBASIC-3.31□□□□□ -2.94
UPK1BO75841 RNY4P10-201ENST00000365571 96 ntBASIC-3.32□□□□□ -2.94
UPK1BO75841 RNU6-1124P-201ENST00000384169 107 ntBASIC-3.32□□□□□ -2.94
Retrieved 100 of 98,524 protein–RNA pairs in 198.4 ms