Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 MIR4788-201ENST00000639104 80 ntBASIC0.72□□□□□ -2.29
MSH5O43196 SNORD114-9-201ENST00000364370 72 ntBASIC0.71□□□□□ -2.3
MSH5O43196 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.7□□□□□ -2.3
MSH5O43196 RNU6-1161P-201ENST00000516176 102 ntBASIC0.69□□□□□ -2.3
MSH5O43196 AC114737.2-201ENST00000421583 173 ntBASIC0.68□□□□□ -2.3
MSH5O43196 VTRNA1-3-201ENST00000365645 89 ntBASIC0.64□□□□□ -2.31
MSH5O43196 MIR382-201ENST00000637119 76 ntBASIC0.62□□□□□ -2.31
MSH5O43196 RNA5SP285-201ENST00000516619 119 ntBASIC0.61□□□□□ -2.31
MSH5O43196 ULK3-223ENST00000631115 126 ntTSL 5 BASIC0.61□□□□□ -2.31
MSH5O43196 MIR6086-201ENST00000638065 55 ntBASIC0.61□□□□□ -2.31
MSH5O43196 RNU6-576P-201ENST00000390854 102 ntBASIC0.6□□□□□ -2.31
MSH5O43196 MIR3666-201ENST00000607845 111 ntBASIC0.6□□□□□ -2.31
MSH5O43196 RNA5SP63-201ENST00000391225 112 ntBASIC0.59□□□□□ -2.31
MSH5O43196 AC023932.2-201ENST00000603176 175 ntBASIC0.52□□□□□ -2.33
MSH5O43196 SNORA18.1-201ENST00000363418 128 ntBASIC0.51□□□□□ -2.33
MSH5O43196 SNORA50A-201ENST00000384225 134 ntBASIC0.51□□□□□ -2.33
MSH5O43196 RNA5SP134-201ENST00000516492 96 ntBASIC0.48□□□□□ -2.33
MSH5O43196 Y_RNA.175-201ENST00000363794 111 ntBASIC0.46□□□□□ -2.34
MSH5O43196 RNU6-841P-201ENST00000383872 107 ntBASIC0.46□□□□□ -2.34
MSH5O43196 RNA5SP300-201ENST00000391197 107 ntBASIC0.45□□□□□ -2.34
MSH5O43196 Y_RNA.137-201ENST00000363455 112 ntBASIC0.44□□□□□ -2.34
MSH5O43196 SNORD114-25-201ENST00000363742 72 ntBASIC0.44□□□□□ -2.34
MSH5O43196 MIR4636-201ENST00000582271 80 ntBASIC0.44□□□□□ -2.34
MSH5O43196 Y_RNA.663-201ENST00000516043 101 ntBASIC0.43□□□□□ -2.34
MSH5O43196 MIR548AM-201ENST00000584298 74 ntBASIC0.42□□□□□ -2.34
MSH5O43196 AP001180.6-201ENST00000584918 159 ntBASIC0.42□□□□□ -2.34
MSH5O43196 MIR6759-201ENST00000638110 65 ntBASIC0.42□□□□□ -2.34
MSH5O43196 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.41□□□□□ -2.34
MSH5O43196 SNORA3B-201ENST00000391305 131 ntBASIC0.41□□□□□ -2.34
MSH5O43196 SNORD115-45-201ENST00000391078 81 ntBASIC0.4□□□□□ -2.35
MSH5O43196 MIR6718-201ENST00000616153 80 ntBASIC0.39□□□□□ -2.35
MSH5O43196 MIR4802-201ENST00000581881 80 ntBASIC0.37□□□□□ -2.35
MSH5O43196 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.37□□□□□ -2.35
MSH5O43196 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.35□□□□□ -2.35
MSH5O43196 MIR5093-201ENST00000583199 100 ntBASIC0.35□□□□□ -2.35
MSH5O43196 Y_RNA.103-201ENST00000363171 102 ntBASIC0.34□□□□□ -2.36
MSH5O43196 MIR4290-201ENST00000583807 95 ntBASIC0.34□□□□□ -2.36
MSH5O43196 SNORD4A-201ENST00000459174 72 ntBASIC0.33□□□□□ -2.36
MSH5O43196 MIR5589-201ENST00000579442 60 ntBASIC0.32□□□□□ -2.36
MSH5O43196 MIR5190-201ENST00000581537 80 ntBASIC0.32□□□□□ -2.36
MSH5O43196 MIR4436A-201ENST00000585278 85 ntBASIC0.3□□□□□ -2.36
MSH5O43196 MIR1295A-201ENST00000408463 79 ntBASIC0.27□□□□□ -2.37
MSH5O43196 AL731768.1-201ENST00000603124 139 ntBASIC0.25□□□□□ -2.37
MSH5O43196 MIR1295B-201ENST00000636144 60 ntBASIC0.22□□□□□ -2.37
MSH5O43196 Y_RNA.696-201ENST00000516725 107 ntBASIC0.21□□□□□ -2.38
MSH5O43196 RNU6-226P-201ENST00000363778 107 ntBASIC0.2□□□□□ -2.38
MSH5O43196 MIR8485-201ENST00000401372 91 ntBASIC0.2□□□□□ -2.38
MSH5O43196 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC0.19□□□□□ -2.38
MSH5O43196 Y_RNA.185-201ENST00000363894 100 ntBASIC0.15□□□□□ -2.39
MSH5O43196 AL627230.5-201ENST00000619807 58 ntBASIC0.15□□□□□ -2.39
MSH5O43196 SNORD114-14-201ENST00000362723 75 ntBASIC0.14□□□□□ -2.39
MSH5O43196 MIR4768-201ENST00000585270 74 ntBASIC0.13□□□□□ -2.39
MSH5O43196 RNU6-1157P-201ENST00000384456 106 ntBASIC0.12□□□□□ -2.39
MSH5O43196 Y_RNA.678-201ENST00000516408 96 ntBASIC0.11□□□□□ -2.39
MSH5O43196 snoU13.19-201ENST00000459148 104 ntBASIC0.09□□□□□ -2.4
MSH5O43196 MIR371B-201ENST00000638082 66 ntBASIC0.09□□□□□ -2.4
MSH5O43196 MIR196A2-201ENST00000385189 110 ntBASIC0.08□□□□□ -2.4
MSH5O43196 RNU6-30P-201ENST00000384561 107 ntBASIC0.07□□□□□ -2.4
MSH5O43196 Y_RNA.391-201ENST00000383933 94 ntBASIC0.06□□□□□ -2.4
MSH5O43196 MIR4667-201ENST00000578933 66 ntBASIC0.05□□□□□ -2.4
MSH5O43196 RNU6-1277P-201ENST00000364561 107 ntBASIC0.04□□□□□ -2.4
MSH5O43196 SNORD114-16-201ENST00000363044 70 ntBASIC0.03□□□□□ -2.4
MSH5O43196 SNORD114-31-201ENST00000363219 75 ntBASIC0.03□□□□□ -2.4
MSH5O43196 MIR487B-201ENST00000385021 84 ntBASIC0.02□□□□□ -2.41
MSH5O43196 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
MSH5O43196 RNA5SP25-201ENST00000410815 110 ntBASIC0.01□□□□□ -2.41
MSH5O43196 MIR6502-201ENST00000617296 76 ntBASIC0.01□□□□□ -2.41
MSH5O43196 MIR4493-201ENST00000584016 73 ntBASIC0□□□□□ -2.41
MSH5O43196 AL359920.1-201ENST00000618332 176 ntBASIC0□□□□□ -2.41
MSH5O43196 Y_RNA.165-201ENST00000363721 102 ntBASIC-0.01□□□□□ -2.41
MSH5O43196 RNA5SP368-201ENST00000364298 116 ntBASIC-0.01□□□□□ -2.41
MSH5O43196 RNU6-758P-201ENST00000516292 89 ntBASIC-0.01□□□□□ -2.41
MSH5O43196 IGLVI-20-201ENST00000519296 130 ntBASIC-0.03□□□□□ -2.41
MSH5O43196 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.04□□□□□ -2.42
MSH5O43196 Y_RNA.652-201ENST00000458902 102 ntBASIC-0.05□□□□□ -2.42
MSH5O43196 RNU6-706P-201ENST00000517229 104 ntBASIC-0.07□□□□□ -2.42
MSH5O43196 RNU4-85P-201ENST00000364675 123 ntBASIC-0.08□□□□□ -2.42
MSH5O43196 RNA5SP449-201ENST00000516871 130 ntBASIC-0.08□□□□□ -2.42
MSH5O43196 MIR604-201ENST00000384880 94 ntBASIC-0.11□□□□□ -2.43
MSH5O43196 MIR214-201ENST00000385214 110 ntBASIC-0.12□□□□□ -2.43
MSH5O43196 SNORD126-201ENST00000459475 77 ntBASIC-0.12□□□□□ -2.43
MSH5O43196 Y_RNA.501-201ENST00000384467 103 ntBASIC-0.15□□□□□ -2.43
MSH5O43196 SNORD114-15-201ENST00000364687 72 ntBASIC-0.17□□□□□ -2.44
MSH5O43196 MIR101-1-201ENST00000362265 75 ntBASIC-0.18□□□□□ -2.44
MSH5O43196 RNA5SP331-201ENST00000364986 107 ntBASIC-0.19□□□□□ -2.44
MSH5O43196 Y_RNA.612-201ENST00000410717 95 ntBASIC-0.19□□□□□ -2.44
MSH5O43196 MIR4520-1-201ENST00000582609 70 ntBASIC-0.19□□□□□ -2.44
MSH5O43196 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.19□□□□□ -2.44
MSH5O43196 SNORD95.1-201ENST00000364099 68 ntBASIC-0.2□□□□□ -2.44
MSH5O43196 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-0.21□□□□□ -2.44
MSH5O43196 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.22□□□□□ -2.44
MSH5O43196 MIR4499-201ENST00000584834 69 ntBASIC-0.23□□□□□ -2.45
MSH5O43196 uc_338.19-201ENST00000616808 99 ntBASIC-0.23□□□□□ -2.45
MSH5O43196 SNORD14C-201ENST00000365382 88 ntBASIC-0.24□□□□□ -2.45
MSH5O43196 MIR409-201ENST00000362237 79 ntBASIC-0.26□□□□□ -2.45
MSH5O43196 MIRLET7A3-201ENST00000362116 74 ntBASIC-0.28□□□□□ -2.45
MSH5O43196 SNORD114-28-201ENST00000363610 72 ntBASIC-0.28□□□□□ -2.45
MSH5O43196 Y_RNA.591-201ENST00000410228 104 ntBASIC-0.3□□□□□ -2.46
MSH5O43196 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.32□□□□□ -2.46
MSH5O43196 MIR8064-201ENST00000612863 90 ntBASIC-0.32□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 180.9 ms