Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 RPL35AP4-201ENST00000412007 102 ntBASIC-0.37□□□□□ -2.47
SOX1O00570 MIR23C-201ENST00000579846 100 ntBASIC-0.37□□□□□ -2.47
SOX1O00570 MIR382-201ENST00000637119 76 ntBASIC-0.37□□□□□ -2.47
SOX1O00570 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.37□□□□□ -2.47
SOX1O00570 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.39□□□□□ -2.47
SOX1O00570 MIR4520-1-201ENST00000582609 70 ntBASIC-0.39□□□□□ -2.47
SOX1O00570 MIR6874-201ENST00000635894 71 ntBASIC-0.39□□□□□ -2.47
SOX1O00570 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.4□□□□□ -2.47
SOX1O00570 MIR1246-201ENST00000636535 73 ntBASIC-0.4□□□□□ -2.47
SOX1O00570 MIR4426-201ENST00000640330 63 ntBASIC-0.4□□□□□ -2.47
SOX1O00570 SNORD114-14-201ENST00000362723 75 ntBASIC-0.41□□□□□ -2.48
SOX1O00570 RNY3P8-201ENST00000411366 126 ntBASIC-0.42□□□□□ -2.48
SOX1O00570 RNU6-706P-201ENST00000517229 104 ntBASIC-0.42□□□□□ -2.48
SOX1O00570 RNU6-986P-201ENST00000363133 102 ntBASIC-0.43□□□□□ -2.48
SOX1O00570 SNORA17.4-201ENST00000391287 132 ntBASIC-0.43□□□□□ -2.48
SOX1O00570 MIR202-201ENST00000362219 110 ntBASIC-0.44□□□□□ -2.48
SOX1O00570 MIR1285-2-201ENST00000408311 88 ntBASIC-0.44□□□□□ -2.48
SOX1O00570 MIR4756-201ENST00000577874 78 ntBASIC-0.44□□□□□ -2.48
SOX1O00570 MIR147A-201ENST00000385079 72 ntBASIC-0.45□□□□□ -2.48
SOX1O00570 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.45□□□□□ -2.48
SOX1O00570 AC091912.2-201ENST00000624798 167 ntBASIC-0.45□□□□□ -2.48
SOX1O00570 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.46□□□□□ -2.48
SOX1O00570 SNORD60-201ENST00000383903 83 ntBASIC-0.46□□□□□ -2.48
SOX1O00570 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.46□□□□□ -2.48
SOX1O00570 HLA-S-202ENST00000425174 53 ntBASIC-0.46□□□□□ -2.48
SOX1O00570 AC090616.4-201ENST00000448026 115 ntBASIC-0.46□□□□□ -2.48
SOX1O00570 RNU6-118P-201ENST00000516552 102 ntBASIC-0.46□□□□□ -2.48
SOX1O00570 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-0.46□□□□□ -2.48
SOX1O00570 RNA5SP26-201ENST00000362406 119 ntBASIC-0.47□□□□□ -2.48
SOX1O00570 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.47□□□□□ -2.48
SOX1O00570 Y_RNA.564-201ENST00000384708 106 ntBASIC-0.47□□□□□ -2.48
SOX1O00570 RNA5SP180-201ENST00000516181 101 ntBASIC-0.47□□□□□ -2.48
SOX1O00570 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.47□□□□□ -2.48
SOX1O00570 RNU6-176P-201ENST00000517196 105 ntBASIC-0.47□□□□□ -2.48
SOX1O00570 MIR5591-201ENST00000578248 65 ntBASIC-0.47□□□□□ -2.48
SOX1O00570 MIR4317-201ENST00000637586 65 ntBASIC-0.47□□□□□ -2.48
SOX1O00570 MIR496-201ENST00000385226 102 ntBASIC-0.48□□□□□ -2.49
SOX1O00570 RNU6-300P-201ENST00000459080 104 ntBASIC-0.48□□□□□ -2.49
SOX1O00570 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.48□□□□□ -2.49
SOX1O00570 MIR4306-201ENST00000583390 91 ntBASIC-0.48□□□□□ -2.49
SOX1O00570 RNA5SP86-201ENST00000390869 98 ntBASIC-0.49□□□□□ -2.49
SOX1O00570 MIR548H4-201ENST00000408689 111 ntBASIC-0.49□□□□□ -2.49
SOX1O00570 MIR3165-201ENST00000579874 75 ntBASIC-0.49□□□□□ -2.49
SOX1O00570 MIR365A-201ENST00000362260 87 ntBASIC-0.5□□□□□ -2.49
SOX1O00570 RNU6-822P-201ENST00000362707 106 ntBASIC-0.5□□□□□ -2.49
SOX1O00570 MIR6502-201ENST00000617296 76 ntBASIC-0.5□□□□□ -2.49
SOX1O00570 MIRLET7A2-201ENST00000362105 72 ntBASIC-0.51□□□□□ -2.49
SOX1O00570 RNA5SP93-201ENST00000362525 114 ntBASIC-0.51□□□□□ -2.49
SOX1O00570 VTRNA2-1-201ENST00000602301 127 ntBASIC-0.51□□□□□ -2.49
SOX1O00570 SNORD18.1-201ENST00000363807 70 ntBASIC-0.53□□□□□ -2.49
SOX1O00570 Y_RNA.421-201ENST00000384052 101 ntBASIC-0.53□□□□□ -2.49
SOX1O00570 MIR3139-201ENST00000579145 76 ntBASIC-0.53□□□□□ -2.49
SOX1O00570 MIR4441-201ENST00000582623 100 ntBASIC-0.53□□□□□ -2.49
SOX1O00570 RNY4P27-201ENST00000363341 96 ntBASIC-0.54□□□□□ -2.5
SOX1O00570 Y_RNA.211-201ENST00000364164 101 ntBASIC-0.54□□□□□ -2.5
SOX1O00570 RNU6-1047P-201ENST00000364418 107 ntBASIC-0.54□□□□□ -2.5
SOX1O00570 AC108019.1-201ENST00000512540 175 ntBASIC-0.54□□□□□ -2.5
SOX1O00570 RNU6-983P-201ENST00000516004 103 ntBASIC-0.54□□□□□ -2.5
SOX1O00570 MIR6818-201ENST00000621576 65 ntBASIC-0.54□□□□□ -2.5
SOX1O00570 Y_RNA.225-201ENST00000364326 97 ntBASIC-0.55□□□□□ -2.5
SOX1O00570 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-0.56□□□□□ -2.5
SOX1O00570 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.56□□□□□ -2.5
SOX1O00570 Y_RNA.103-201ENST00000363171 102 ntBASIC-0.57□□□□□ -2.5
SOX1O00570 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.57□□□□□ -2.5
SOX1O00570 MT-TM-201ENST00000387377 68 ntBASIC-0.57□□□□□ -2.5
SOX1O00570 MIR548H1-201ENST00000408610 102 ntBASIC-0.57□□□□□ -2.5
SOX1O00570 MIR548N-201ENST00000408742 75 ntBASIC-0.57□□□□□ -2.5
SOX1O00570 snoU83B.1-201ENST00000517136 88 ntBASIC-0.57□□□□□ -2.5
SOX1O00570 RNU6-563P-201ENST00000364872 108 ntBASIC-0.58□□□□□ -2.5
SOX1O00570 RNU6-1008P-201ENST00000384160 104 ntBASIC-0.58□□□□□ -2.5
SOX1O00570 AC120024.2-201ENST00000576526 175 ntBASIC-0.58□□□□□ -2.5
SOX1O00570 RNU6-1306P-201ENST00000365219 99 ntBASIC-0.59□□□□□ -2.5
SOX1O00570 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.59□□□□□ -2.5
SOX1O00570 AC013734.1-201ENST00000619329 111 ntBASIC-0.59□□□□□ -2.5
SOX1O00570 RNU6-79P-201ENST00000362511 107 ntBASIC-0.6□□□□□ -2.51
SOX1O00570 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.61□□□□□ -2.51
SOX1O00570 RNU6-1326P-201ENST00000391262 107 ntBASIC-0.61□□□□□ -2.51
SOX1O00570 RNU6-1191P-201ENST00000516799 107 ntBASIC-0.61□□□□□ -2.51
SOX1O00570 AC138207.3-201ENST00000585289 166 ntBASIC-0.61□□□□□ -2.51
SOX1O00570 RNU6-59P-201ENST00000384787 107 ntBASIC-0.62□□□□□ -2.51
SOX1O00570 Y_RNA.781-201ENST00000620301 103 ntBASIC-0.62□□□□□ -2.51
SOX1O00570 AC018880.2-201ENST00000414265 201 ntBASIC-0.64□□□□□ -2.51
SOX1O00570 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.64□□□□□ -2.51
SOX1O00570 RNA5SP405-201ENST00000363059 114 ntBASIC-0.65□□□□□ -2.51
SOX1O00570 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-0.65□□□□□ -2.51
SOX1O00570 MIR4770-201ENST00000579149 58 ntBASIC-0.65□□□□□ -2.51
SOX1O00570 MIR664B-201ENST00000626756 61 ntBASIC-0.65□□□□□ -2.51
SOX1O00570 RNU6-164P-201ENST00000364604 103 ntBASIC-0.66□□□□□ -2.52
SOX1O00570 Y_RNA.403-201ENST00000383977 101 ntBASIC-0.66□□□□□ -2.52
SOX1O00570 Y_RNA.345-201ENST00000365384 92 ntBASIC-0.67□□□□□ -2.52
SOX1O00570 Y_RNA.449-201ENST00000384187 102 ntBASIC-0.67□□□□□ -2.52
SOX1O00570 RNU6-576P-201ENST00000390854 102 ntBASIC-0.67□□□□□ -2.52
SOX1O00570 MIR548W-201ENST00000581970 74 ntBASIC-0.67□□□□□ -2.52
SOX1O00570 Y_RNA.79-201ENST00000362992 113 ntBASIC-0.68□□□□□ -2.52
SOX1O00570 Y_RNA.223-201ENST00000364290 113 ntBASIC-0.68□□□□□ -2.52
SOX1O00570 Y_RNA.502-201ENST00000384478 113 ntBASIC-0.68□□□□□ -2.52
SOX1O00570 snoU13.10-201ENST00000459301 103 ntBASIC-0.68□□□□□ -2.52
SOX1O00570 U6.97-201ENST00000636904 101 ntBASIC-0.68□□□□□ -2.52
SOX1O00570 Y_RNA.204-201ENST00000364112 102 ntBASIC-0.69□□□□□ -2.52
SOX1O00570 MIR3123-201ENST00000583417 75 ntBASIC-0.69□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 301 ms