Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.46□□□□□ -2.64
CCDC188H7C350 AC005520.4-201ENST00000604337 90 ntBASIC-1.46□□□□□ -2.64
CCDC188H7C350 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.46□□□□□ -2.64
CCDC188H7C350 SNORD116-24-201ENST00000384549 92 ntBASIC-1.47□□□□□ -2.64
CCDC188H7C350 Y_RNA.520-201ENST00000384556 102 ntBASIC-1.47□□□□□ -2.64
CCDC188H7C350 MIR581-201ENST00000384895 96 ntBASIC-1.47□□□□□ -2.64
CCDC188H7C350 MIR4666B-201ENST00000578142 81 ntBASIC-1.47□□□□□ -2.64
CCDC188H7C350 AL731768.1-201ENST00000603124 139 ntBASIC-1.47□□□□□ -2.64
CCDC188H7C350 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.47□□□□□ -2.64
CCDC188H7C350 MIR548AA1-201ENST00000384971 97 ntBASIC-1.48□□□□□ -2.65
CCDC188H7C350 MIR3134-201ENST00000579433 74 ntBASIC-1.48□□□□□ -2.65
CCDC188H7C350 MIR23C-201ENST00000579846 100 ntBASIC-1.48□□□□□ -2.65
CCDC188H7C350 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.5□□□□□ -2.65
CCDC188H7C350 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.5□□□□□ -2.65
CCDC188H7C350 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.5□□□□□ -2.65
CCDC188H7C350 MIR5582-201ENST00000579697 68 ntBASIC-1.5□□□□□ -2.65
CCDC188H7C350 SNORD1B-201ENST00000363091 84 ntBASIC-1.51□□□□□ -2.65
CCDC188H7C350 Y_RNA.266-201ENST00000364678 96 ntBASIC-1.51□□□□□ -2.65
CCDC188H7C350 Y_RNA.652-201ENST00000458902 102 ntBASIC-1.51□□□□□ -2.65
CCDC188H7C350 MIR3170-201ENST00000582699 77 ntBASIC-1.51□□□□□ -2.65
CCDC188H7C350 Y_RNA.63-201ENST00000362841 102 ntBASIC-1.52□□□□□ -2.65
CCDC188H7C350 RNU6-820P-201ENST00000384273 107 ntBASIC-1.52□□□□□ -2.65
CCDC188H7C350 RNU6-800P-201ENST00000384473 103 ntBASIC-1.52□□□□□ -2.65
CCDC188H7C350 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.53□□□□□ -2.65
CCDC188H7C350 RNU6-787P-201ENST00000384032 107 ntBASIC-1.53□□□□□ -2.65
CCDC188H7C350 RNU6-687P-201ENST00000516443 89 ntBASIC-1.53□□□□□ -2.65
CCDC188H7C350 RNU6-995P-201ENST00000391244 107 ntBASIC-1.54□□□□□ -2.66
CCDC188H7C350 RNU6-247P-201ENST00000362636 107 ntBASIC-1.55□□□□□ -2.66
CCDC188H7C350 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.56□□□□□ -2.66
CCDC188H7C350 RNU6-411P-201ENST00000384451 107 ntBASIC-1.56□□□□□ -2.66
CCDC188H7C350 RNY3P8-201ENST00000411366 126 ntBASIC-1.56□□□□□ -2.66
CCDC188H7C350 RNU6-542P-201ENST00000516405 103 ntBASIC-1.56□□□□□ -2.66
CCDC188H7C350 AC062037.1-201ENST00000605302 128 ntBASIC-1.56□□□□□ -2.66
CCDC188H7C350 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.56□□□□□ -2.66
CCDC188H7C350 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.57□□□□□ -2.66
CCDC188H7C350 RNU6-530P-201ENST00000391180 107 ntBASIC-1.57□□□□□ -2.66
CCDC188H7C350 RNU7-151P-201ENST00000516930 53 ntBASIC-1.57□□□□□ -2.66
CCDC188H7C350 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.57□□□□□ -2.66
CCDC188H7C350 AL359920.1-201ENST00000618332 176 ntBASIC-1.57□□□□□ -2.66
CCDC188H7C350 MIR579-201ENST00000385221 98 ntBASIC-1.58□□□□□ -2.66
CCDC188H7C350 SNORD18C-201ENST00000362704 69 ntBASIC-1.59□□□□□ -2.66
CCDC188H7C350 RNU6-912P-201ENST00000363800 104 ntBASIC-1.59□□□□□ -2.66
CCDC188H7C350 Y_RNA.612-201ENST00000410717 95 ntBASIC-1.59□□□□□ -2.66
CCDC188H7C350 RNU6-172P-201ENST00000411000 93 ntBASIC-1.59□□□□□ -2.66
CCDC188H7C350 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.59□□□□□ -2.66
CCDC188H7C350 U7.4-201ENST00000614961 63 ntBASIC-1.59□□□□□ -2.66
CCDC188H7C350 SNORD115-45-201ENST00000391078 81 ntBASIC-1.6□□□□□ -2.67
CCDC188H7C350 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.6□□□□□ -2.67
CCDC188H7C350 RNU6-92P-201ENST00000605893 104 ntBASIC-1.6□□□□□ -2.67
CCDC188H7C350 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-1.6□□□□□ -2.67
CCDC188H7C350 RNU6-1128P-201ENST00000362825 109 ntBASIC-1.61□□□□□ -2.67
CCDC188H7C350 RNU6-665P-201ENST00000384639 107 ntBASIC-1.61□□□□□ -2.67
CCDC188H7C350 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.61□□□□□ -2.67
CCDC188H7C350 RNU6-68P-201ENST00000516576 104 ntBASIC-1.61□□□□□ -2.67
CCDC188H7C350 MIR1254-1-201ENST00000408257 97 ntBASIC-1.62□□□□□ -2.67
CCDC188H7C350 Y_RNA.663-201ENST00000516043 101 ntBASIC-1.62□□□□□ -2.67
CCDC188H7C350 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.63□□□□□ -2.67
CCDC188H7C350 MIR7978-201ENST00000636158 59 ntBASIC-1.64□□□□□ -2.67
CCDC188H7C350 RNU6-974P-201ENST00000384099 108 ntBASIC-1.65□□□□□ -2.67
CCDC188H7C350 SNORD63.2-201ENST00000516303 64 ntBASIC-1.65□□□□□ -2.67
CCDC188H7C350 RNU6-669P-201ENST00000365575 107 ntBASIC-1.66□□□□□ -2.68
CCDC188H7C350 RNU6-663P-201ENST00000391105 106 ntBASIC-1.66□□□□□ -2.68
CCDC188H7C350 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.66□□□□□ -2.68
CCDC188H7C350 RNU6-737P-201ENST00000365370 107 ntBASIC-1.67□□□□□ -2.68
CCDC188H7C350 RNY4P13-201ENST00000384284 96 ntBASIC-1.67□□□□□ -2.68
CCDC188H7C350 RNU6-634P-201ENST00000459134 106 ntBASIC-1.67□□□□□ -2.68
CCDC188H7C350 SNORA27.2-201ENST00000363365 126 ntBASIC-1.68□□□□□ -2.68
CCDC188H7C350 MIR548N-201ENST00000408742 75 ntBASIC-1.68□□□□□ -2.68
CCDC188H7C350 RNA5SP170-201ENST00000517150 101 ntBASIC-1.68□□□□□ -2.68
CCDC188H7C350 SNORD60.1-201ENST00000362451 73 ntBASIC-1.69□□□□□ -2.68
CCDC188H7C350 SNORD73B-201ENST00000364394 72 ntBASIC-1.69□□□□□ -2.68
CCDC188H7C350 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.69□□□□□ -2.68
CCDC188H7C350 MIR548AH-201ENST00000637109 76 ntBASIC-1.69□□□□□ -2.68
CCDC188H7C350 MIR125B1-201ENST00000385236 88 ntBASIC-1.7□□□□□ -2.68
CCDC188H7C350 MIR124-1-201ENST00000385275 85 ntBASIC-1.7□□□□□ -2.68
CCDC188H7C350 RNU6-1161P-201ENST00000516176 102 ntBASIC-1.7□□□□□ -2.68
CCDC188H7C350 MIR3202-2-201ENST00000635980 79 ntBASIC-1.7□□□□□ -2.68
CCDC188H7C350 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.71□□□□□ -2.68
CCDC188H7C350 MIR7110-201ENST00000612638 86 ntBASIC-1.71□□□□□ -2.68
CCDC188H7C350 MIR202-201ENST00000362219 110 ntBASIC-1.72□□□□□ -2.68
CCDC188H7C350 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.72□□□□□ -2.68
CCDC188H7C350 RNU6-854P-201ENST00000364036 107 ntBASIC-1.72□□□□□ -2.68
CCDC188H7C350 RNU6-573P-201ENST00000383938 106 ntBASIC-1.72□□□□□ -2.68
CCDC188H7C350 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.72□□□□□ -2.68
CCDC188H7C350 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.73□□□□□ -2.69
CCDC188H7C350 SNORD30.1-201ENST00000391309 70 ntBASIC-1.73□□□□□ -2.69
CCDC188H7C350 RNU6-523P-201ENST00000516304 54 ntBASIC-1.73□□□□□ -2.69
CCDC188H7C350 RNU6-1169P-201ENST00000363537 103 ntBASIC-1.75□□□□□ -2.69
CCDC188H7C350 RNU7-160P-201ENST00000516660 62 ntBASIC-1.75□□□□□ -2.69
CCDC188H7C350 RNU6-231P-201ENST00000517122 103 ntBASIC-1.75□□□□□ -2.69
CCDC188H7C350 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.76□□□□□ -2.69
CCDC188H7C350 SNORA25.4-201ENST00000363666 124 ntBASIC-1.76□□□□□ -2.69
CCDC188H7C350 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.76□□□□□ -2.69
CCDC188H7C350 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.76□□□□□ -2.69
CCDC188H7C350 SNORA26.2-201ENST00000390922 122 ntBASIC-1.76□□□□□ -2.69
CCDC188H7C350 SNORD116.2-201ENST00000391251 93 ntBASIC-1.76□□□□□ -2.69
CCDC188H7C350 MIR1255A-201ENST00000408338 113 ntBASIC-1.76□□□□□ -2.69
CCDC188H7C350 SNORA25.5-201ENST00000363782 126 ntBASIC-1.77□□□□□ -2.69
CCDC188H7C350 RNU6-810P-201ENST00000364001 107 ntBASIC-1.77□□□□□ -2.69
CCDC188H7C350 RNU6-649P-201ENST00000384463 107 ntBASIC-1.77□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 170.1 ms