Protein–RNA interactions for Protein: A6NCW7

USP17L4, Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L4A6NCW7 RNU6-930P-201ENST00000390938 100 ntBASIC-0.79□□□□□ -2.54
USP17L4A6NCW7 SNORD18C-201ENST00000362704 69 ntBASIC-0.8□□□□□ -2.54
USP17L4A6NCW7 MIR8485-201ENST00000401372 91 ntBASIC-0.8□□□□□ -2.54
USP17L4A6NCW7 RNU6-300P-201ENST00000459080 104 ntBASIC-0.8□□□□□ -2.54
USP17L4A6NCW7 RNU6-176P-201ENST00000517196 105 ntBASIC-0.8□□□□□ -2.54
USP17L4A6NCW7 MIR378F-201ENST00000578143 78 ntBASIC-0.8□□□□□ -2.54
USP17L4A6NCW7 MIR4306-201ENST00000583390 91 ntBASIC-0.8□□□□□ -2.54
USP17L4A6NCW7 U6.97-201ENST00000636904 101 ntBASIC-0.8□□□□□ -2.54
USP17L4A6NCW7 MIR409-201ENST00000362237 79 ntBASIC-0.81□□□□□ -2.54
USP17L4A6NCW7 DLEU2_4.2-201ENST00000616613 58 ntBASIC-0.82□□□□□ -2.54
USP17L4A6NCW7 RNU6-1047P-201ENST00000364418 107 ntBASIC-0.83□□□□□ -2.54
USP17L4A6NCW7 RNU6-695P-201ENST00000391157 104 ntBASIC-0.84□□□□□ -2.54
USP17L4A6NCW7 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-0.84□□□□□ -2.54
USP17L4A6NCW7 Y_RNA.449-201ENST00000384187 102 ntBASIC-0.85□□□□□ -2.55
USP17L4A6NCW7 Y_RNA.129-201ENST00000363392 110 ntBASIC-0.86□□□□□ -2.55
USP17L4A6NCW7 RNU6-1204P-201ENST00000363948 107 ntBASIC-0.86□□□□□ -2.55
USP17L4A6NCW7 SNORD19B.1-201ENST00000630615 80 ntBASIC-0.86□□□□□ -2.55
USP17L4A6NCW7 Y_RNA.175-201ENST00000363794 111 ntBASIC-0.87□□□□□ -2.55
USP17L4A6NCW7 RNU6-986P-201ENST00000363133 102 ntBASIC-0.88□□□□□ -2.55
USP17L4A6NCW7 RNA5SP331-201ENST00000364986 107 ntBASIC-0.88□□□□□ -2.55
USP17L4A6NCW7 MIR3123-201ENST00000583417 75 ntBASIC-0.88□□□□□ -2.55
USP17L4A6NCW7 AC138207.3-201ENST00000585289 166 ntBASIC-0.88□□□□□ -2.55
USP17L4A6NCW7 MIR379-201ENST00000362218 67 ntBASIC-0.89□□□□□ -2.55
USP17L4A6NCW7 RNU6-1034P-201ENST00000365335 101 ntBASIC-0.89□□□□□ -2.55
USP17L4A6NCW7 MIR548AJ2-201ENST00000408539 92 ntBASIC-0.91□□□□□ -2.56
USP17L4A6NCW7 Y_RNA.320-201ENST00000365144 102 ntBASIC-0.92□□□□□ -2.56
USP17L4A6NCW7 RNU6-59P-201ENST00000384787 107 ntBASIC-0.92□□□□□ -2.56
USP17L4A6NCW7 MIR4317-201ENST00000637586 65 ntBASIC-0.92□□□□□ -2.56
USP17L4A6NCW7 MIR545-201ENST00000385085 106 ntBASIC-0.93□□□□□ -2.56
USP17L4A6NCW7 MIR4324-201ENST00000584846 72 ntBASIC-0.93□□□□□ -2.56
USP17L4A6NCW7 MIR6738-201ENST00000619620 64 ntBASIC-0.93□□□□□ -2.56
USP17L4A6NCW7 RNU6-841P-201ENST00000383872 107 ntBASIC-0.94□□□□□ -2.56
USP17L4A6NCW7 RNA5SP86-201ENST00000390869 98 ntBASIC-0.94□□□□□ -2.56
USP17L4A6NCW7 RNU6-1326P-201ENST00000391262 107 ntBASIC-0.94□□□□□ -2.56
USP17L4A6NCW7 RNA5SP266-201ENST00000410273 108 ntBASIC-0.94□□□□□ -2.56
USP17L4A6NCW7 MIR548W-201ENST00000581970 74 ntBASIC-0.94□□□□□ -2.56
USP17L4A6NCW7 MIR4520-1-201ENST00000582609 70 ntBASIC-0.94□□□□□ -2.56
USP17L4A6NCW7 RNU6-1008P-201ENST00000384160 104 ntBASIC-0.95□□□□□ -2.56
USP17L4A6NCW7 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.95□□□□□ -2.56
USP17L4A6NCW7 MIR587-201ENST00000384845 96 ntBASIC-0.95□□□□□ -2.56
USP17L4A6NCW7 Y_RNA.103-201ENST00000363171 102 ntBASIC-0.96□□□□□ -2.56
USP17L4A6NCW7 Y_RNA.345-201ENST00000365384 92 ntBASIC-0.96□□□□□ -2.56
USP17L4A6NCW7 RNU6-10P-201ENST00000384036 107 ntBASIC-0.96□□□□□ -2.56
USP17L4A6NCW7 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.96□□□□□ -2.56
USP17L4A6NCW7 MIR548H1-201ENST00000408610 102 ntBASIC-0.97□□□□□ -2.56
USP17L4A6NCW7 RNU6-706P-201ENST00000517229 104 ntBASIC-0.97□□□□□ -2.56
USP17L4A6NCW7 MIR4770-201ENST00000579149 58 ntBASIC-0.97□□□□□ -2.56
USP17L4A6NCW7 RNU6-822P-201ENST00000362707 106 ntBASIC-0.98□□□□□ -2.57
USP17L4A6NCW7 RNU6-912P-201ENST00000363800 104 ntBASIC-0.98□□□□□ -2.57
USP17L4A6NCW7 Y_RNA.349-201ENST00000365406 102 ntBASIC-0.98□□□□□ -2.57
USP17L4A6NCW7 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.98□□□□□ -2.57
USP17L4A6NCW7 snoU13.10-201ENST00000459301 103 ntBASIC-0.99□□□□□ -2.57
USP17L4A6NCW7 MIR5591-201ENST00000578248 65 ntBASIC-0.99□□□□□ -2.57
USP17L4A6NCW7 MIR548AM-201ENST00000584298 74 ntBASIC-0.99□□□□□ -2.57
USP17L4A6NCW7 Y_RNA.382-201ENST00000365672 114 ntBASIC-1□□□□□ -2.57
USP17L4A6NCW7 Y_RNA.457-201ENST00000384237 111 ntBASIC-1□□□□□ -2.57
USP17L4A6NCW7 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.01□□□□□ -2.57
USP17L4A6NCW7 MIR487B-201ENST00000385021 84 ntBASIC-1.01□□□□□ -2.57
USP17L4A6NCW7 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.01□□□□□ -2.57
USP17L4A6NCW7 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.02□□□□□ -2.57
USP17L4A6NCW7 MIR3115-201ENST00000577915 68 ntBASIC-1.04□□□□□ -2.58
USP17L4A6NCW7 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.04□□□□□ -2.58
USP17L4A6NCW7 HLA-S-202ENST00000425174 53 ntBASIC-1.06□□□□□ -2.58
USP17L4A6NCW7 RNU6-1169P-201ENST00000363537 103 ntBASIC-1.07□□□□□ -2.58
USP17L4A6NCW7 SNX3P1X-201ENST00000414887 175 ntBASIC-1.07□□□□□ -2.58
USP17L4A6NCW7 MIR4320-201ENST00000636981 65 ntBASIC-1.07□□□□□ -2.58
USP17L4A6NCW7 Y_RNA.206-201ENST00000364136 102 ntBASIC-1.08□□□□□ -2.58
USP17L4A6NCW7 SNORD113-3-201ENST00000364830 72 ntBASIC-1.08□□□□□ -2.58
USP17L4A6NCW7 RNA5SP224-201ENST00000365069 126 ntBASIC-1.08□□□□□ -2.58
USP17L4A6NCW7 FTX_4.1-201ENST00000616291 147 ntBASIC-1.08□□□□□ -2.58
USP17L4A6NCW7 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.1□□□□□ -2.59
USP17L4A6NCW7 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.1□□□□□ -2.59
USP17L4A6NCW7 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.1□□□□□ -2.59
USP17L4A6NCW7 AC097484.2-201ENST00000509147 251 ntBASIC-1.11□□□□□ -2.59
USP17L4A6NCW7 RNU6-345P-201ENST00000517001 107 ntBASIC-1.11□□□□□ -2.59
USP17L4A6NCW7 MIR3165-201ENST00000579874 75 ntBASIC-1.11□□□□□ -2.59
USP17L4A6NCW7 AC108019.1-201ENST00000512540 175 ntBASIC-1.12□□□□□ -2.59
USP17L4A6NCW7 Y_RNA.260-201ENST00000364628 101 ntBASIC-1.13□□□□□ -2.59
USP17L4A6NCW7 RNU6-836P-201ENST00000362920 107 ntBASIC-1.15□□□□□ -2.59
USP17L4A6NCW7 RNU6-226P-201ENST00000363778 107 ntBASIC-1.15□□□□□ -2.59
USP17L4A6NCW7 MIR1254-1-201ENST00000408257 97 ntBASIC-1.15□□□□□ -2.59
USP17L4A6NCW7 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.15□□□□□ -2.59
USP17L4A6NCW7 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.15□□□□□ -2.59
USP17L4A6NCW7 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.15□□□□□ -2.59
USP17L4A6NCW7 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.15□□□□□ -2.59
USP17L4A6NCW7 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.15□□□□□ -2.59
USP17L4A6NCW7 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.15□□□□□ -2.59
USP17L4A6NCW7 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.17□□□□□ -2.6
USP17L4A6NCW7 RNA5SP461-201ENST00000516451 104 ntBASIC-1.17□□□□□ -2.6
USP17L4A6NCW7 MIR4756-201ENST00000577874 78 ntBASIC-1.17□□□□□ -2.6
USP17L4A6NCW7 SNORD115.2-201ENST00000391126 59 ntBASIC-1.18□□□□□ -2.6
USP17L4A6NCW7 MIR601-201ENST00000385256 79 ntBASIC-1.19□□□□□ -2.6
USP17L4A6NCW7 SNORD18.1-201ENST00000363807 70 ntBASIC-1.2□□□□□ -2.6
USP17L4A6NCW7 SNORD45C-201ENST00000383893 79 ntBASIC-1.2□□□□□ -2.6
USP17L4A6NCW7 MIR656-201ENST00000385224 78 ntBASIC-1.2□□□□□ -2.6
USP17L4A6NCW7 MIR664B-201ENST00000626756 61 ntBASIC-1.21□□□□□ -2.6
USP17L4A6NCW7 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.23□□□□□ -2.61
USP17L4A6NCW7 MIR4748-201ENST00000578076 82 ntBASIC-1.24□□□□□ -2.61
USP17L4A6NCW7 U6.103-201ENST00000637085 61 ntBASIC-1.24□□□□□ -2.61
USP17L4A6NCW7 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.24□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 168.6 ms