Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.2□□□□□ -2.76
VCX3AQ9NNX9 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.21□□□□□ -2.76
VCX3AQ9NNX9 RNU6-70P-201ENST00000516438 60 ntBASIC-2.21□□□□□ -2.76
VCX3AQ9NNX9 MIR5588-201ENST00000581890 63 ntBASIC-2.21□□□□□ -2.76
VCX3AQ9NNX9 RNU6-92P-201ENST00000605893 104 ntBASIC-2.21□□□□□ -2.76
VCX3AQ9NNX9 Y_RNA.616-201ENST00000410835 95 ntBASIC-2.22□□□□□ -2.76
VCX3AQ9NNX9 RNU6-542P-201ENST00000516405 103 ntBASIC-2.22□□□□□ -2.76
VCX3AQ9NNX9 MIR4712-201ENST00000583750 82 ntBASIC-2.22□□□□□ -2.76
VCX3AQ9NNX9 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.23□□□□□ -2.77
VCX3AQ9NNX9 RNU6-828P-201ENST00000364876 107 ntBASIC-2.23□□□□□ -2.77
VCX3AQ9NNX9 RNU6-520P-201ENST00000384717 104 ntBASIC-2.23□□□□□ -2.77
VCX3AQ9NNX9 RNU6-313P-201ENST00000516317 112 ntBASIC-2.23□□□□□ -2.77
VCX3AQ9NNX9 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.24□□□□□ -2.77
VCX3AQ9NNX9 MIR548AI-201ENST00000579940 88 ntBASIC-2.24□□□□□ -2.77
VCX3AQ9NNX9 RNA5SP405-201ENST00000363059 114 ntBASIC-2.25□□□□□ -2.77
VCX3AQ9NNX9 RNU6-194P-201ENST00000363862 105 ntBASIC-2.25□□□□□ -2.77
VCX3AQ9NNX9 RNY1P1-201ENST00000364372 112 ntBASIC-2.25□□□□□ -2.77
VCX3AQ9NNX9 RNU6-979P-201ENST00000383896 107 ntBASIC-2.25□□□□□ -2.77
VCX3AQ9NNX9 MIR7110-201ENST00000612638 86 ntBASIC-2.25□□□□□ -2.77
VCX3AQ9NNX9 IGLL4P-201ENST00000614590 133 ntBASIC-2.25□□□□□ -2.77
VCX3AQ9NNX9 MIR202-201ENST00000362219 110 ntBASIC-2.26□□□□□ -2.77
VCX3AQ9NNX9 SNORD60-201ENST00000383903 83 ntBASIC-2.26□□□□□ -2.77
VCX3AQ9NNX9 RNU6-649P-201ENST00000384463 107 ntBASIC-2.26□□□□□ -2.77
VCX3AQ9NNX9 SNORD60.1-201ENST00000362451 73 ntBASIC-2.27□□□□□ -2.77
VCX3AQ9NNX9 RNU6-118P-201ENST00000516552 102 ntBASIC-2.27□□□□□ -2.77
VCX3AQ9NNX9 MIR1245B-201ENST00000636115 69 ntBASIC-2.27□□□□□ -2.77
VCX3AQ9NNX9 MIR581-201ENST00000384895 96 ntBASIC-2.28□□□□□ -2.77
VCX3AQ9NNX9 RNU6-231P-201ENST00000517122 103 ntBASIC-2.28□□□□□ -2.77
VCX3AQ9NNX9 Y_RNA.788-201ENST00000622394 112 ntBASIC-2.28□□□□□ -2.77
VCX3AQ9NNX9 RNU6-810P-201ENST00000364001 107 ntBASIC-2.29□□□□□ -2.78
VCX3AQ9NNX9 RNU6-147P-201ENST00000383983 107 ntBASIC-2.29□□□□□ -2.78
VCX3AQ9NNX9 snosnR66.1-201ENST00000391095 99 ntBASIC-2.29□□□□□ -2.78
VCX3AQ9NNX9 MIR548N-201ENST00000408742 75 ntBASIC-2.29□□□□□ -2.78
VCX3AQ9NNX9 RNU7-171P-201ENST00000459581 62 ntBASIC-2.3□□□□□ -2.78
VCX3AQ9NNX9 MIR466-201ENST00000580653 84 ntBASIC-2.3□□□□□ -2.78
VCX3AQ9NNX9 Y_RNA.413-201ENST00000384007 102 ntBASIC-2.31□□□□□ -2.78
VCX3AQ9NNX9 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.31□□□□□ -2.78
VCX3AQ9NNX9 Y_RNA.754-201ENST00000476024 102 ntBASIC-2.31□□□□□ -2.78
VCX3AQ9NNX9 MIR3134-201ENST00000579433 74 ntBASIC-2.31□□□□□ -2.78
VCX3AQ9NNX9 Y_RNA.790-201ENST00000614282 102 ntBASIC-2.31□□□□□ -2.78
VCX3AQ9NNX9 Y_RNA.782-201ENST00000614695 102 ntBASIC-2.31□□□□□ -2.78
VCX3AQ9NNX9 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.32□□□□□ -2.78
VCX3AQ9NNX9 RNU6-1131P-201ENST00000364955 107 ntBASIC-2.32□□□□□ -2.78
VCX3AQ9NNX9 AC097484.2-201ENST00000509147 251 ntBASIC-2.32□□□□□ -2.78
VCX3AQ9NNX9 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.32□□□□□ -2.78
VCX3AQ9NNX9 RNU6-687P-201ENST00000516443 89 ntBASIC-2.32□□□□□ -2.78
VCX3AQ9NNX9 RNU6-49P-201ENST00000384256 107 ntBASIC-2.33□□□□□ -2.78
VCX3AQ9NNX9 SNORD116.2-201ENST00000391251 93 ntBASIC-2.33□□□□□ -2.78
VCX3AQ9NNX9 SNORA17.4-201ENST00000391287 132 ntBASIC-2.33□□□□□ -2.78
VCX3AQ9NNX9 FTX_4.1-201ENST00000616291 147 ntBASIC-2.33□□□□□ -2.78
VCX3AQ9NNX9 SNORD114-3-201ENST00000364969 75 ntBASIC-2.34□□□□□ -2.78
VCX3AQ9NNX9 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.34□□□□□ -2.78
VCX3AQ9NNX9 Y_RNA.94-201ENST00000363068 106 ntBASIC-2.35□□□□□ -2.79
VCX3AQ9NNX9 RNU6-361P-201ENST00000364454 107 ntBASIC-2.35□□□□□ -2.79
VCX3AQ9NNX9 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.35□□□□□ -2.79
VCX3AQ9NNX9 SNORA40B-201ENST00000385573 128 ntBASIC-2.35□□□□□ -2.79
VCX3AQ9NNX9 MIR4748-201ENST00000578076 82 ntBASIC-2.35□□□□□ -2.79
VCX3AQ9NNX9 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.36□□□□□ -2.79
VCX3AQ9NNX9 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.36□□□□□ -2.79
VCX3AQ9NNX9 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.36□□□□□ -2.79
VCX3AQ9NNX9 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.36□□□□□ -2.79
VCX3AQ9NNX9 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.36□□□□□ -2.79
VCX3AQ9NNX9 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.36□□□□□ -2.79
VCX3AQ9NNX9 Y_RNA.55-201ENST00000362797 102 ntBASIC-2.37□□□□□ -2.79
VCX3AQ9NNX9 Y_RNA.291-201ENST00000364886 113 ntBASIC-2.37□□□□□ -2.79
VCX3AQ9NNX9 MIR548M-201ENST00000408260 86 ntBASIC-2.37□□□□□ -2.79
VCX3AQ9NNX9 Y_RNA.629-201ENST00000411368 105 ntBASIC-2.37□□□□□ -2.79
VCX3AQ9NNX9 Y_RNA.443-201ENST00000384135 111 ntBASIC-2.38□□□□□ -2.79
VCX3AQ9NNX9 RNU6-530P-201ENST00000391180 107 ntBASIC-2.39□□□□□ -2.79
VCX3AQ9NNX9 MIR3668-201ENST00000582138 75 ntBASIC-2.39□□□□□ -2.79
VCX3AQ9NNX9 U4.2-201ENST00000618561 85 ntBASIC-2.39□□□□□ -2.79
VCX3AQ9NNX9 RNU6-411P-201ENST00000384451 107 ntBASIC-2.4□□□□□ -2.79
VCX3AQ9NNX9 AL627230.5-201ENST00000619807 58 ntBASIC-2.4□□□□□ -2.79
VCX3AQ9NNX9 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.41□□□□□ -2.8
VCX3AQ9NNX9 RNU6-122P-201ENST00000516818 107 ntBASIC-2.41□□□□□ -2.8
VCX3AQ9NNX9 SNORA40.16-201ENST00000517238 121 ntBASIC-2.41□□□□□ -2.8
VCX3AQ9NNX9 RNU6-242P-201ENST00000384359 107 ntBASIC-2.42□□□□□ -2.8
VCX3AQ9NNX9 RNU6-1015P-201ENST00000517121 99 ntBASIC-2.42□□□□□ -2.8
VCX3AQ9NNX9 RNU6-215P-201ENST00000365169 102 ntBASIC-2.43□□□□□ -2.8
VCX3AQ9NNX9 MIR3139-201ENST00000579145 76 ntBASIC-2.43□□□□□ -2.8
VCX3AQ9NNX9 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.43□□□□□ -2.8
VCX3AQ9NNX9 MIR4426-201ENST00000640330 63 ntBASIC-2.43□□□□□ -2.8
VCX3AQ9NNX9 MIR379-201ENST00000362218 67 ntBASIC-2.44□□□□□ -2.8
VCX3AQ9NNX9 SNORA25.5-201ENST00000363782 126 ntBASIC-2.44□□□□□ -2.8
VCX3AQ9NNX9 RNU6-1276P-201ENST00000365372 104 ntBASIC-2.44□□□□□ -2.8
VCX3AQ9NNX9 RNU6-663P-201ENST00000391105 106 ntBASIC-2.44□□□□□ -2.8
VCX3AQ9NNX9 RNU6-919P-201ENST00000516731 104 ntBASIC-2.44□□□□□ -2.8
VCX3AQ9NNX9 MIR3910-1-201ENST00000580936 111 ntBASIC-2.44□□□□□ -2.8
VCX3AQ9NNX9 MIR494-201ENST00000349529 81 ntBASIC-2.45□□□□□ -2.8
VCX3AQ9NNX9 SNORD45.2-201ENST00000363552 72 ntBASIC-2.45□□□□□ -2.8
VCX3AQ9NNX9 SNORD113-1-201ENST00000365321 69 ntBASIC-2.45□□□□□ -2.8
VCX3AQ9NNX9 AL451105.1-201ENST00000450005 189 ntBASIC-2.45□□□□□ -2.8
VCX3AQ9NNX9 RNU6-634P-201ENST00000459134 106 ntBASIC-2.45□□□□□ -2.8
VCX3AQ9NNX9 RNU7-119P-201ENST00000459279 63 ntBASIC-2.45□□□□□ -2.8
VCX3AQ9NNX9 MIR4666B-201ENST00000578142 81 ntBASIC-2.45□□□□□ -2.8
VCX3AQ9NNX9 RNY4P27-201ENST00000363341 96 ntBASIC-2.46□□□□□ -2.8
VCX3AQ9NNX9 SNORD113-3-201ENST00000364830 72 ntBASIC-2.46□□□□□ -2.8
VCX3AQ9NNX9 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.46□□□□□ -2.8
VCX3AQ9NNX9 RNA5SP89-201ENST00000410300 108 ntBASIC-2.46□□□□□ -2.8
VCX3AQ9NNX9 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.46□□□□□ -2.8
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms