Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 RNU6-172P-201ENST00000411000 93 ntBASIC-2.04□□□□□ -2.74
RPAP3Q9H6T3 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.04□□□□□ -2.74
RPAP3Q9H6T3 U4.2-201ENST00000618561 85 ntBASIC-2.04□□□□□ -2.74
RPAP3Q9H6T3 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.05□□□□□ -2.74
RPAP3Q9H6T3 MIR125B1-201ENST00000385236 88 ntBASIC-2.05□□□□□ -2.74
RPAP3Q9H6T3 RNU6-995P-201ENST00000391244 107 ntBASIC-2.05□□□□□ -2.74
RPAP3Q9H6T3 MIR5588-201ENST00000581890 63 ntBASIC-2.05□□□□□ -2.74
RPAP3Q9H6T3 MIR548W-201ENST00000581970 74 ntBASIC-2.05□□□□□ -2.74
RPAP3Q9H6T3 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.05□□□□□ -2.74
RPAP3Q9H6T3 Y_RNA.316-201ENST00000365118 111 ntBASIC-2.06□□□□□ -2.74
RPAP3Q9H6T3 snoU13.10-201ENST00000459301 103 ntBASIC-2.06□□□□□ -2.74
RPAP3Q9H6T3 RNU6-523P-201ENST00000516304 54 ntBASIC-2.06□□□□□ -2.74
RPAP3Q9H6T3 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.07□□□□□ -2.74
RPAP3Q9H6T3 RNU6-44P-201ENST00000384045 107 ntBASIC-2.07□□□□□ -2.74
RPAP3Q9H6T3 RNA5SP173-201ENST00000364857 136 ntBASIC-2.08□□□□□ -2.74
RPAP3Q9H6T3 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.08□□□□□ -2.74
RPAP3Q9H6T3 SNORD114-3-201ENST00000364969 75 ntBASIC-2.09□□□□□ -2.74
RPAP3Q9H6T3 RNU6-979P-201ENST00000383896 107 ntBASIC-2.09□□□□□ -2.74
RPAP3Q9H6T3 SNORD116-24-201ENST00000384549 92 ntBASIC-2.1□□□□□ -2.75
RPAP3Q9H6T3 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.1□□□□□ -2.75
RPAP3Q9H6T3 RNA5SP89-201ENST00000410300 108 ntBASIC-2.1□□□□□ -2.75
RPAP3Q9H6T3 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.1□□□□□ -2.75
RPAP3Q9H6T3 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.11□□□□□ -2.75
RPAP3Q9H6T3 Y_RNA.313-201ENST00000365095 103 ntBASIC-2.11□□□□□ -2.75
RPAP3Q9H6T3 Y_RNA.375-201ENST00000365625 101 ntBASIC-2.11□□□□□ -2.75
RPAP3Q9H6T3 MIR581-201ENST00000384895 96 ntBASIC-2.11□□□□□ -2.75
RPAP3Q9H6T3 RNU6-1241P-201ENST00000384536 107 ntBASIC-2.12□□□□□ -2.75
RPAP3Q9H6T3 RNU6-70P-201ENST00000516438 60 ntBASIC-2.12□□□□□ -2.75
RPAP3Q9H6T3 MIR1207-201ENST00000408249 87 ntBASIC-2.13□□□□□ -2.75
RPAP3Q9H6T3 RNY4P30-201ENST00000410216 95 ntBASIC-2.13□□□□□ -2.75
RPAP3Q9H6T3 Y_RNA.616-201ENST00000410835 95 ntBASIC-2.13□□□□□ -2.75
RPAP3Q9H6T3 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.14□□□□□ -2.75
RPAP3Q9H6T3 MIR154-201ENST00000385243 84 ntBASIC-2.14□□□□□ -2.75
RPAP3Q9H6T3 RNA5SP405-201ENST00000363059 114 ntBASIC-2.15□□□□□ -2.75
RPAP3Q9H6T3 AL603908.1-201ENST00000406098 201 ntBASIC-2.15□□□□□ -2.75
RPAP3Q9H6T3 RNU6-895P-201ENST00000384125 103 ntBASIC-2.16□□□□□ -2.76
RPAP3Q9H6T3 RNU7-171P-201ENST00000459581 62 ntBASIC-2.16□□□□□ -2.76
RPAP3Q9H6T3 MIR4712-201ENST00000583750 82 ntBASIC-2.16□□□□□ -2.76
RPAP3Q9H6T3 MIR1245B-201ENST00000636115 69 ntBASIC-2.16□□□□□ -2.76
RPAP3Q9H6T3 RNU6-194P-201ENST00000363862 105 ntBASIC-2.17□□□□□ -2.76
RPAP3Q9H6T3 Y_RNA.55-201ENST00000362797 102 ntBASIC-2.18□□□□□ -2.76
RPAP3Q9H6T3 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.18□□□□□ -2.76
RPAP3Q9H6T3 MIR494-201ENST00000349529 81 ntBASIC-2.19□□□□□ -2.76
RPAP3Q9H6T3 MIR202-201ENST00000362219 110 ntBASIC-2.19□□□□□ -2.76
RPAP3Q9H6T3 SNORD18C-201ENST00000362704 69 ntBASIC-2.19□□□□□ -2.76
RPAP3Q9H6T3 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.19□□□□□ -2.76
RPAP3Q9H6T3 RNU6-520P-201ENST00000384717 104 ntBASIC-2.19□□□□□ -2.76
RPAP3Q9H6T3 RNU6-118P-201ENST00000516552 102 ntBASIC-2.19□□□□□ -2.76
RPAP3Q9H6T3 RNU6-789P-201ENST00000517105 102 ntBASIC-2.19□□□□□ -2.76
RPAP3Q9H6T3 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.2□□□□□ -2.76
RPAP3Q9H6T3 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.2□□□□□ -2.76
RPAP3Q9H6T3 Y_RNA.788-201ENST00000622394 112 ntBASIC-2.2□□□□□ -2.76
RPAP3Q9H6T3 RNU6-649P-201ENST00000384463 107 ntBASIC-2.22□□□□□ -2.76
RPAP3Q9H6T3 MIR548AI-201ENST00000579940 88 ntBASIC-2.22□□□□□ -2.76
RPAP3Q9H6T3 RNU6-810P-201ENST00000364001 107 ntBASIC-2.23□□□□□ -2.77
RPAP3Q9H6T3 RNU7-160P-201ENST00000516660 62 ntBASIC-2.23□□□□□ -2.77
RPAP3Q9H6T3 RNU6-92P-201ENST00000605893 104 ntBASIC-2.23□□□□□ -2.77
RPAP3Q9H6T3 MIR548N-201ENST00000408742 75 ntBASIC-2.24□□□□□ -2.77
RPAP3Q9H6T3 MIR3134-201ENST00000579433 74 ntBASIC-2.24□□□□□ -2.77
RPAP3Q9H6T3 SNORD60.1-201ENST00000362451 73 ntBASIC-2.25□□□□□ -2.77
RPAP3Q9H6T3 Y_RNA.94-201ENST00000363068 106 ntBASIC-2.25□□□□□ -2.77
RPAP3Q9H6T3 AC097484.2-201ENST00000509147 251 ntBASIC-2.25□□□□□ -2.77
RPAP3Q9H6T3 MIR4748-201ENST00000578076 82 ntBASIC-2.25□□□□□ -2.77
RPAP3Q9H6T3 MIR3139-201ENST00000579145 76 ntBASIC-2.25□□□□□ -2.77
RPAP3Q9H6T3 RNU6-828P-201ENST00000364876 107 ntBASIC-2.26□□□□□ -2.77
RPAP3Q9H6T3 Y_RNA.291-201ENST00000364886 113 ntBASIC-2.26□□□□□ -2.77
RPAP3Q9H6T3 RNU6-242P-201ENST00000384359 107 ntBASIC-2.26□□□□□ -2.77
RPAP3Q9H6T3 MIR7110-201ENST00000612638 86 ntBASIC-2.26□□□□□ -2.77
RPAP3Q9H6T3 SNORD60-201ENST00000383903 83 ntBASIC-2.27□□□□□ -2.77
RPAP3Q9H6T3 RNU6-542P-201ENST00000516405 103 ntBASIC-2.27□□□□□ -2.77
RPAP3Q9H6T3 RNU6-231P-201ENST00000517122 103 ntBASIC-2.27□□□□□ -2.77
RPAP3Q9H6T3 MIR466-201ENST00000580653 84 ntBASIC-2.27□□□□□ -2.77
RPAP3Q9H6T3 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.27□□□□□ -2.77
RPAP3Q9H6T3 FTX_4.1-201ENST00000616291 147 ntBASIC-2.27□□□□□ -2.77
RPAP3Q9H6T3 RNU6-1276P-201ENST00000365372 104 ntBASIC-2.28□□□□□ -2.77
RPAP3Q9H6T3 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.28□□□□□ -2.77
RPAP3Q9H6T3 RNU6-406P-201ENST00000516470 107 ntBASIC-2.28□□□□□ -2.77
RPAP3Q9H6T3 RNU6-1015P-201ENST00000517121 99 ntBASIC-2.28□□□□□ -2.77
RPAP3Q9H6T3 SNORA17.4-201ENST00000391287 132 ntBASIC-2.29□□□□□ -2.78
RPAP3Q9H6T3 SNORD116.2-201ENST00000391251 93 ntBASIC-2.3□□□□□ -2.78
RPAP3Q9H6T3 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.3□□□□□ -2.78
RPAP3Q9H6T3 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.3□□□□□ -2.78
RPAP3Q9H6T3 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.3□□□□□ -2.78
RPAP3Q9H6T3 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.3□□□□□ -2.78
RPAP3Q9H6T3 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.3□□□□□ -2.78
RPAP3Q9H6T3 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.3□□□□□ -2.78
RPAP3Q9H6T3 RNU6-361P-201ENST00000364454 107 ntBASIC-2.31□□□□□ -2.78
RPAP3Q9H6T3 MIR450A2-201ENST00000385022 100 ntBASIC-2.31□□□□□ -2.78
RPAP3Q9H6T3 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.31□□□□□ -2.78
RPAP3Q9H6T3 RNU6-687P-201ENST00000516443 89 ntBASIC-2.31□□□□□ -2.78
RPAP3Q9H6T3 RNY4P27-201ENST00000363341 96 ntBASIC-2.32□□□□□ -2.78
RPAP3Q9H6T3 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-2.32□□□□□ -2.78
RPAP3Q9H6T3 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.32□□□□□ -2.78
RPAP3Q9H6T3 MIR4666B-201ENST00000578142 81 ntBASIC-2.32□□□□□ -2.78
RPAP3Q9H6T3 SNORD113-3-201ENST00000364830 72 ntBASIC-2.33□□□□□ -2.78
RPAP3Q9H6T3 RNU6-294P-201ENST00000364999 102 ntBASIC-2.33□□□□□ -2.78
RPAP3Q9H6T3 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.33□□□□□ -2.78
RPAP3Q9H6T3 RNU6-68P-201ENST00000516576 104 ntBASIC-2.33□□□□□ -2.78
RPAP3Q9H6T3 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.34□□□□□ -2.78
RPAP3Q9H6T3 RNU6-153P-201ENST00000364422 104 ntBASIC-2.34□□□□□ -2.78
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms