Protein–RNA interactions for Protein: Q96DZ5

CLIP3, CAP-Gly domain-containing linker protein 3, humanhuman

Predictions only

Length 547 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3Q96DZ5 MIR548H4-201ENST00000408689 111 ntBASIC-0.18□□□□□ -2.44
CLIP3Q96DZ5 SNORD114-31-201ENST00000363219 75 ntBASIC-0.19□□□□□ -2.44
CLIP3Q96DZ5 MIR214-201ENST00000385214 110 ntBASIC-0.19□□□□□ -2.44
CLIP3Q96DZ5 RNY3P8-201ENST00000411366 126 ntBASIC-0.2□□□□□ -2.44
CLIP3Q96DZ5 RPL35AP4-201ENST00000412007 102 ntBASIC-0.21□□□□□ -2.44
CLIP3Q96DZ5 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.21□□□□□ -2.44
CLIP3Q96DZ5 MIR6759-201ENST00000638110 65 ntBASIC-0.21□□□□□ -2.44
CLIP3Q96DZ5 RNU6-1204P-201ENST00000363948 107 ntBASIC-0.22□□□□□ -2.44
CLIP3Q96DZ5 RNU6-361P-201ENST00000364454 107 ntBASIC-0.22□□□□□ -2.44
CLIP3Q96DZ5 IGLVI-20-201ENST00000519296 130 ntBASIC-0.22□□□□□ -2.44
CLIP3Q96DZ5 MIR4645-201ENST00000583158 77 ntBASIC-0.23□□□□□ -2.45
CLIP3Q96DZ5 MIR196A2-201ENST00000385189 110 ntBASIC-0.24□□□□□ -2.45
CLIP3Q96DZ5 MIR507-201ENST00000385234 94 ntBASIC-0.24□□□□□ -2.45
CLIP3Q96DZ5 MIR4426-201ENST00000640330 63 ntBASIC-0.24□□□□□ -2.45
CLIP3Q96DZ5 RNA5SP26-201ENST00000362406 119 ntBASIC-0.25□□□□□ -2.45
CLIP3Q96DZ5 RNU6-320P-201ENST00000516511 106 ntBASIC-0.25□□□□□ -2.45
CLIP3Q96DZ5 MIR4436A-201ENST00000585278 85 ntBASIC-0.25□□□□□ -2.45
CLIP3Q96DZ5 MIR8064-201ENST00000612863 90 ntBASIC-0.25□□□□□ -2.45
CLIP3Q96DZ5 MIR202-201ENST00000362219 110 ntBASIC-0.26□□□□□ -2.45
CLIP3Q96DZ5 RNA5SP275-201ENST00000363936 118 ntBASIC-0.26□□□□□ -2.45
CLIP3Q96DZ5 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.26□□□□□ -2.45
CLIP3Q96DZ5 AC021146.6-201ENST00000514659 117 ntBASIC-0.26□□□□□ -2.45
CLIP3Q96DZ5 SNORD114-28-201ENST00000363610 72 ntBASIC-0.27□□□□□ -2.45
CLIP3Q96DZ5 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.27□□□□□ -2.45
CLIP3Q96DZ5 MIR147A-201ENST00000385079 72 ntBASIC-0.27□□□□□ -2.45
CLIP3Q96DZ5 AC090616.4-201ENST00000448026 115 ntBASIC-0.27□□□□□ -2.45
CLIP3Q96DZ5 RNU6-431P-201ENST00000383874 107 ntBASIC-0.28□□□□□ -2.45
CLIP3Q96DZ5 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.28□□□□□ -2.45
CLIP3Q96DZ5 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-0.28□□□□□ -2.45
CLIP3Q96DZ5 SNORD114-14-201ENST00000362723 75 ntBASIC-0.29□□□□□ -2.46
CLIP3Q96DZ5 SNORD14C-201ENST00000365382 88 ntBASIC-0.29□□□□□ -2.46
CLIP3Q96DZ5 RNU6-1008P-201ENST00000384160 104 ntBASIC-0.29□□□□□ -2.46
CLIP3Q96DZ5 SNORD126-201ENST00000459475 77 ntBASIC-0.29□□□□□ -2.46
CLIP3Q96DZ5 MIR5589-201ENST00000579442 60 ntBASIC-0.29□□□□□ -2.46
CLIP3Q96DZ5 MIR3681-201ENST00000580089 72 ntBASIC-0.29□□□□□ -2.46
CLIP3Q96DZ5 SNORA17.4-201ENST00000391287 132 ntBASIC-0.3□□□□□ -2.46
CLIP3Q96DZ5 SNORA3B-201ENST00000391305 131 ntBASIC-0.3□□□□□ -2.46
CLIP3Q96DZ5 RPS29P8-201ENST00000445109 171 ntBASIC-0.3□□□□□ -2.46
CLIP3Q96DZ5 MIR4802-201ENST00000581881 80 ntBASIC-0.3□□□□□ -2.46
CLIP3Q96DZ5 AP001180.6-201ENST00000584918 159 ntBASIC-0.3□□□□□ -2.46
CLIP3Q96DZ5 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.31□□□□□ -2.46
CLIP3Q96DZ5 RNU6-822P-201ENST00000362707 106 ntBASIC-0.32□□□□□ -2.46
CLIP3Q96DZ5 RNU6-59P-201ENST00000384787 107 ntBASIC-0.32□□□□□ -2.46
CLIP3Q96DZ5 AC013734.1-201ENST00000619329 111 ntBASIC-0.32□□□□□ -2.46
CLIP3Q96DZ5 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.33□□□□□ -2.46
CLIP3Q96DZ5 RNU6-284P-201ENST00000411105 106 ntBASIC-0.33□□□□□ -2.46
CLIP3Q96DZ5 MIR23C-201ENST00000579846 100 ntBASIC-0.33□□□□□ -2.46
CLIP3Q96DZ5 MIR4636-201ENST00000582271 80 ntBASIC-0.33□□□□□ -2.46
CLIP3Q96DZ5 RNU6-1047P-201ENST00000364418 107 ntBASIC-0.34□□□□□ -2.46
CLIP3Q96DZ5 SNORA32.3-201ENST00000384772 121 ntBASIC-0.34□□□□□ -2.46
CLIP3Q96DZ5 SNORD64-201ENST00000386683 67 ntBASIC-0.34□□□□□ -2.46
CLIP3Q96DZ5 MIR548N-201ENST00000408742 75 ntBASIC-0.34□□□□□ -2.46
CLIP3Q96DZ5 RNU6-300P-201ENST00000459080 104 ntBASIC-0.34□□□□□ -2.46
CLIP3Q96DZ5 MIR548AZ-201ENST00000616567 95 ntBASIC-0.34□□□□□ -2.46
CLIP3Q96DZ5 RNA5SP368-201ENST00000364298 116 ntBASIC-0.35□□□□□ -2.47
CLIP3Q96DZ5 MIR101-1-201ENST00000362265 75 ntBASIC-0.36□□□□□ -2.47
CLIP3Q96DZ5 RNU6-563P-201ENST00000364872 108 ntBASIC-0.36□□□□□ -2.47
CLIP3Q96DZ5 MIR4493-201ENST00000584016 73 ntBASIC-0.36□□□□□ -2.47
CLIP3Q96DZ5 SNORD60-201ENST00000383903 83 ntBASIC-0.37□□□□□ -2.47
CLIP3Q96DZ5 MIR604-201ENST00000384880 94 ntBASIC-0.37□□□□□ -2.47
CLIP3Q96DZ5 MIR581-201ENST00000384895 96 ntBASIC-0.37□□□□□ -2.47
CLIP3Q96DZ5 RNU6-1326P-201ENST00000391262 107 ntBASIC-0.37□□□□□ -2.47
CLIP3Q96DZ5 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.37□□□□□ -2.47
CLIP3Q96DZ5 MIR4317-201ENST00000637586 65 ntBASIC-0.37□□□□□ -2.47
CLIP3Q96DZ5 RNA5SP451-201ENST00000410588 110 ntBASIC-0.38□□□□□ -2.47
CLIP3Q96DZ5 RNY1P9-201ENST00000532431 109 ntBASIC-0.38□□□□□ -2.47
CLIP3Q96DZ5 AC120024.2-201ENST00000576526 175 ntBASIC-0.38□□□□□ -2.47
CLIP3Q96DZ5 MIR6818-201ENST00000621576 65 ntBASIC-0.38□□□□□ -2.47
CLIP3Q96DZ5 Y_RNA.345-201ENST00000365384 92 ntBASIC-0.39□□□□□ -2.47
CLIP3Q96DZ5 RNU6-758P-201ENST00000516292 89 ntBASIC-0.39□□□□□ -2.47
CLIP3Q96DZ5 RNU6-176P-201ENST00000517196 105 ntBASIC-0.39□□□□□ -2.47
CLIP3Q96DZ5 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.4□□□□□ -2.47
CLIP3Q96DZ5 MIR382-201ENST00000637119 76 ntBASIC-0.4□□□□□ -2.47
CLIP3Q96DZ5 MIR224-201ENST00000384889 81 ntBASIC-0.41□□□□□ -2.48
CLIP3Q96DZ5 AL500527.2-201ENST00000454105 95 ntBASIC-0.41□□□□□ -2.48
CLIP3Q96DZ5 Z95118.1-201ENST00000421372 247 ntBASIC-0.42□□□□□ -2.48
CLIP3Q96DZ5 RNU4-63P-201ENST00000411313 118 ntBASIC-0.43□□□□□ -2.48
CLIP3Q96DZ5 RNU6-68P-201ENST00000516576 104 ntBASIC-0.43□□□□□ -2.48
CLIP3Q96DZ5 Y_RNA.223-201ENST00000364290 113 ntBASIC-0.44□□□□□ -2.48
CLIP3Q96DZ5 SNORD114-25-201ENST00000363742 72 ntBASIC-0.45□□□□□ -2.48
CLIP3Q96DZ5 Y_RNA.781-201ENST00000620301 103 ntBASIC-0.45□□□□□ -2.48
CLIP3Q96DZ5 U6.97-201ENST00000636904 101 ntBASIC-0.45□□□□□ -2.48
CLIP3Q96DZ5 RNU6-30P-201ENST00000384561 107 ntBASIC-0.46□□□□□ -2.48
CLIP3Q96DZ5 RNU7-134P-201ENST00000458997 64 ntBASIC-0.46□□□□□ -2.48
CLIP3Q96DZ5 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.46□□□□□ -2.48
CLIP3Q96DZ5 RNU6-164P-201ENST00000364604 103 ntBASIC-0.47□□□□□ -2.48
CLIP3Q96DZ5 RNU6-79P-201ENST00000362511 107 ntBASIC-0.48□□□□□ -2.49
CLIP3Q96DZ5 Y_RNA.206-201ENST00000364136 102 ntBASIC-0.48□□□□□ -2.49
CLIP3Q96DZ5 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.48□□□□□ -2.49
CLIP3Q96DZ5 AC018880.2-201ENST00000414265 201 ntBASIC-0.48□□□□□ -2.49
CLIP3Q96DZ5 MIR6086-201ENST00000638065 55 ntBASIC-0.48□□□□□ -2.49
CLIP3Q96DZ5 MIR196A1-201ENST00000388006 70 ntBASIC-0.49□□□□□ -2.49
CLIP3Q96DZ5 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.49□□□□□ -2.49
CLIP3Q96DZ5 SCARNA17-201ENST00000516183 144 ntBASIC-0.49□□□□□ -2.49
CLIP3Q96DZ5 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-0.49□□□□□ -2.49
CLIP3Q96DZ5 RNU6-724P-201ENST00000390958 105 ntBASIC-0.5□□□□□ -2.49
CLIP3Q96DZ5 snoU83B.1-201ENST00000517136 88 ntBASIC-0.5□□□□□ -2.49
CLIP3Q96DZ5 U6.103-201ENST00000637085 61 ntBASIC-0.5□□□□□ -2.49
CLIP3Q96DZ5 SNORD18C-201ENST00000362704 69 ntBASIC-0.52□□□□□ -2.49
CLIP3Q96DZ5 SNORD95.1-201ENST00000364099 68 ntBASIC-0.52□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 438.6 ms