Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 RNY3P8-201ENST00000411366 126 ntBASIC-2.96□□□□□ -2.88
CLHC1Q8NHS4 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.96□□□□□ -2.88
CLHC1Q8NHS4 RNU6-794P-201ENST00000517261 64 ntBASIC-2.96□□□□□ -2.88
CLHC1Q8NHS4 RNU7-160P-201ENST00000516660 62 ntBASIC-2.97□□□□□ -2.88
CLHC1Q8NHS4 RNU6-1094P-201ENST00000362416 104 ntBASIC-2.98□□□□□ -2.89
CLHC1Q8NHS4 MIR548W-201ENST00000581970 74 ntBASIC-2.98□□□□□ -2.89
CLHC1Q8NHS4 SNORD116-24-201ENST00000384549 92 ntBASIC-2.99□□□□□ -2.89
CLHC1Q8NHS4 Y_RNA.186-201ENST00000363899 92 ntBASIC-3□□□□□ -2.89
CLHC1Q8NHS4 SNORD115-31-201ENST00000365318 82 ntBASIC-3□□□□□ -2.89
CLHC1Q8NHS4 snoU13.10-201ENST00000459301 103 ntBASIC-3□□□□□ -2.89
CLHC1Q8NHS4 RNU6-844P-201ENST00000517175 102 ntBASIC-3□□□□□ -2.89
CLHC1Q8NHS4 RNU6-1241P-201ENST00000384536 107 ntBASIC-3.01□□□□□ -2.89
CLHC1Q8NHS4 RNU6-789P-201ENST00000517105 102 ntBASIC-3.01□□□□□ -2.89
CLHC1Q8NHS4 Y_RNA.139-201ENST00000363464 102 ntBASIC-3.02□□□□□ -2.89
CLHC1Q8NHS4 MIR488-201ENST00000365739 83 ntBASIC-3.02□□□□□ -2.89
CLHC1Q8NHS4 RNU6-1168P-201ENST00000390831 104 ntBASIC-3.02□□□□□ -2.89
CLHC1Q8NHS4 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-3.02□□□□□ -2.89
CLHC1Q8NHS4 Y_RNA.313-201ENST00000365095 103 ntBASIC-3.03□□□□□ -2.89
CLHC1Q8NHS4 RNU6-974P-201ENST00000384099 108 ntBASIC-3.03□□□□□ -2.89
CLHC1Q8NHS4 RNU6-520P-201ENST00000384717 104 ntBASIC-3.05□□□□□ -2.9
CLHC1Q8NHS4 AC090425.1-201ENST00000610007 140 ntBASIC-3.05□□□□□ -2.9
CLHC1Q8NHS4 RNY1P1-201ENST00000364372 112 ntBASIC-3.06□□□□□ -2.9
CLHC1Q8NHS4 RNU6-542P-201ENST00000516405 103 ntBASIC-3.06□□□□□ -2.9
CLHC1Q8NHS4 Y_RNA.69-201ENST00000362885 109 ntBASIC-3.07□□□□□ -2.9
CLHC1Q8NHS4 RNU6-640P-201ENST00000363693 105 ntBASIC-3.07□□□□□ -2.9
CLHC1Q8NHS4 SNORD60-201ENST00000383903 83 ntBASIC-3.07□□□□□ -2.9
CLHC1Q8NHS4 RNU6-895P-201ENST00000384125 103 ntBASIC-3.07□□□□□ -2.9
CLHC1Q8NHS4 RNU6-92P-201ENST00000605893 104 ntBASIC-3.07□□□□□ -2.9
CLHC1Q8NHS4 TARS-215ENST00000626210 201 ntTSL 5 BASIC-3.07□□□□□ -2.9
CLHC1Q8NHS4 RNU6-828P-201ENST00000364876 107 ntBASIC-3.08□□□□□ -2.9
CLHC1Q8NHS4 Y_RNA.316-201ENST00000365118 111 ntBASIC-3.08□□□□□ -2.9
CLHC1Q8NHS4 MIR154-201ENST00000385243 84 ntBASIC-3.08□□□□□ -2.9
CLHC1Q8NHS4 MIR466-201ENST00000580653 84 ntBASIC-3.08□□□□□ -2.9
CLHC1Q8NHS4 Y_RNA.17-201ENST00000362433 111 ntBASIC-3.09□□□□□ -2.9
CLHC1Q8NHS4 MIR548N-201ENST00000408742 75 ntBASIC-3.09□□□□□ -2.9
CLHC1Q8NHS4 MIR4748-201ENST00000578076 82 ntBASIC-3.09□□□□□ -2.9
CLHC1Q8NHS4 MIR548AI-201ENST00000579940 88 ntBASIC-3.09□□□□□ -2.9
CLHC1Q8NHS4 RNU6-22P-201ENST00000384355 107 ntBASIC-3.1□□□□□ -2.91
CLHC1Q8NHS4 MIR581-201ENST00000384895 96 ntBASIC-3.1□□□□□ -2.91
CLHC1Q8NHS4 snoMBII-202.2-201ENST00000517263 86 ntBASIC-3.1□□□□□ -2.91
CLHC1Q8NHS4 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-3.1□□□□□ -2.91
CLHC1Q8NHS4 RNU6-209P-201ENST00000384118 107 ntBASIC-3.11□□□□□ -2.91
CLHC1Q8NHS4 RNU6-70P-201ENST00000516438 60 ntBASIC-3.11□□□□□ -2.91
CLHC1Q8NHS4 MIR7110-201ENST00000612638 86 ntBASIC-3.11□□□□□ -2.91
CLHC1Q8NHS4 Y_RNA.501-201ENST00000384467 103 ntBASIC-3.13□□□□□ -2.91
CLHC1Q8NHS4 AC097484.2-201ENST00000509147 251 ntBASIC-3.13□□□□□ -2.91
CLHC1Q8NHS4 MIR5588-201ENST00000581890 63 ntBASIC-3.13□□□□□ -2.91
CLHC1Q8NHS4 FTX_4.1-201ENST00000616291 147 ntBASIC-3.13□□□□□ -2.91
CLHC1Q8NHS4 RNU6-32P-201ENST00000383948 107 ntBASIC-3.14□□□□□ -2.91
CLHC1Q8NHS4 RNU6-13P-201ENST00000384248 107 ntBASIC-3.14□□□□□ -2.91
CLHC1Q8NHS4 RNU6-1117P-201ENST00000384525 104 ntBASIC-3.14□□□□□ -2.91
CLHC1Q8NHS4 RNU6-12P-201ENST00000384604 107 ntBASIC-3.14□□□□□ -2.91
CLHC1Q8NHS4 RNU6-41P-201ENST00000384741 107 ntBASIC-3.14□□□□□ -2.91
CLHC1Q8NHS4 RNU6-361P-201ENST00000364454 107 ntBASIC-3.15□□□□□ -2.91
CLHC1Q8NHS4 RNU6-979P-201ENST00000383896 107 ntBASIC-3.15□□□□□ -2.91
CLHC1Q8NHS4 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-3.15□□□□□ -2.91
CLHC1Q8NHS4 Y_RNA.593-201ENST00000410292 98 ntBASIC-3.15□□□□□ -2.91
CLHC1Q8NHS4 MIR202-201ENST00000362219 110 ntBASIC-3.16□□□□□ -2.92
CLHC1Q8NHS4 SNORD60.1-201ENST00000362451 73 ntBASIC-3.16□□□□□ -2.92
CLHC1Q8NHS4 RNU6-649P-201ENST00000384463 107 ntBASIC-3.16□□□□□ -2.92
CLHC1Q8NHS4 TMSB4XP3-201ENST00000445144 114 ntBASIC-3.16□□□□□ -2.92
CLHC1Q8NHS4 MIR4712-201ENST00000583750 82 ntBASIC-3.16□□□□□ -2.92
CLHC1Q8NHS4 IGLL4P-201ENST00000614590 133 ntBASIC-3.17□□□□□ -2.92
CLHC1Q8NHS4 RNU6-1306P-201ENST00000365219 99 ntBASIC-3.18□□□□□ -2.92
CLHC1Q8NHS4 Y_RNA.349-201ENST00000365406 102 ntBASIC-3.18□□□□□ -2.92
CLHC1Q8NHS4 RNU6-1154P-201ENST00000391001 104 ntBASIC-3.18□□□□□ -2.92
CLHC1Q8NHS4 SNORA17.4-201ENST00000391287 132 ntBASIC-3.18□□□□□ -2.92
CLHC1Q8NHS4 RNU6-231P-201ENST00000517122 103 ntBASIC-3.18□□□□□ -2.92
CLHC1Q8NHS4 MIR1245B-201ENST00000636115 69 ntBASIC-3.18□□□□□ -2.92
CLHC1Q8NHS4 Y_RNA.73-201ENST00000362910 113 ntBASIC-3.19□□□□□ -2.92
CLHC1Q8NHS4 RNU6-1134P-201ENST00000365156 101 ntBASIC-3.19□□□□□ -2.92
CLHC1Q8NHS4 RNU6-1206P-201ENST00000516339 103 ntBASIC-3.19□□□□□ -2.92
CLHC1Q8NHS4 RNU6-810P-201ENST00000364001 107 ntBASIC-3.2□□□□□ -2.92
CLHC1Q8NHS4 RNU7-171P-201ENST00000459581 62 ntBASIC-3.2□□□□□ -2.92
CLHC1Q8NHS4 RNU6-313P-201ENST00000516317 112 ntBASIC-3.2□□□□□ -2.92
CLHC1Q8NHS4 Y_RNA.647-201ENST00000459194 112 ntBASIC-3.21□□□□□ -2.92
CLHC1Q8NHS4 Y_RNA.640-201ENST00000459296 112 ntBASIC-3.21□□□□□ -2.92
CLHC1Q8NHS4 Y_RNA.803-201ENST00000614432 112 ntBASIC-3.21□□□□□ -2.92
CLHC1Q8NHS4 Y_RNA.815-201ENST00000616655 112 ntBASIC-3.21□□□□□ -2.92
CLHC1Q8NHS4 Y_RNA.795-201ENST00000619475 112 ntBASIC-3.21□□□□□ -2.92
CLHC1Q8NHS4 Y_RNA.827-201ENST00000638104 112 ntBASIC-3.21□□□□□ -2.92
CLHC1Q8NHS4 RNU6-687P-201ENST00000516443 89 ntBASIC-3.22□□□□□ -2.92
CLHC1Q8NHS4 RNU6-1079P-201ENST00000362861 110 ntBASIC-3.25□□□□□ -2.93
CLHC1Q8NHS4 Y_RNA.291-201ENST00000364886 113 ntBASIC-3.25□□□□□ -2.93
CLHC1Q8NHS4 SNORA40B-201ENST00000385573 128 ntBASIC-3.26□□□□□ -2.93
CLHC1Q8NHS4 MIR3134-201ENST00000579433 74 ntBASIC-3.26□□□□□ -2.93
CLHC1Q8NHS4 RNU6-1121P-201ENST00000516802 109 ntBASIC-3.27□□□□□ -2.93
CLHC1Q8NHS4 Y_RNA.788-201ENST00000622394 112 ntBASIC-3.27□□□□□ -2.93
CLHC1Q8NHS4 MIR379-201ENST00000362218 67 ntBASIC-3.28□□□□□ -2.93
CLHC1Q8NHS4 RNU6-147P-201ENST00000383983 107 ntBASIC-3.28□□□□□ -2.93
CLHC1Q8NHS4 SNORD116.2-201ENST00000391251 93 ntBASIC-3.28□□□□□ -2.93
CLHC1Q8NHS4 Y_RNA.94-201ENST00000363068 106 ntBASIC-3.29□□□□□ -2.94
CLHC1Q8NHS4 Y_RNA.443-201ENST00000384135 111 ntBASIC-3.3□□□□□ -2.94
CLHC1Q8NHS4 Y_RNA.629-201ENST00000411368 105 ntBASIC-3.3□□□□□ -2.94
CLHC1Q8NHS4 SNORD45.2-201ENST00000363552 72 ntBASIC-3.31□□□□□ -2.94
CLHC1Q8NHS4 Y_RNA.566-201ENST00000384735 101 ntBASIC-3.31□□□□□ -2.94
CLHC1Q8NHS4 RNY4P9-201ENST00000363194 97 ntBASIC-3.33□□□□□ -2.94
CLHC1Q8NHS4 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-3.33□□□□□ -2.94
CLHC1Q8NHS4 RNU6-530P-201ENST00000391180 107 ntBASIC-3.33□□□□□ -2.94
CLHC1Q8NHS4 RNU6-122P-201ENST00000516818 107 ntBASIC-3.33□□□□□ -2.94
Retrieved 100 of 98,524 protein–RNA pairs in 297 ms