Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 SNORD116-16-201ENST00000384533 92 ntBASIC-1.89□□□□□ -2.71
TTC39CQ8N584 RNU4-88P-201ENST00000411220 86 ntBASIC-1.89□□□□□ -2.71
TTC39CQ8N584 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.89□□□□□ -2.71
TTC39CQ8N584 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.9□□□□□ -2.71
TTC39CQ8N584 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.9□□□□□ -2.71
TTC39CQ8N584 MIR5582-201ENST00000579697 68 ntBASIC-1.9□□□□□ -2.71
TTC39CQ8N584 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.91□□□□□ -2.72
TTC39CQ8N584 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.91□□□□□ -2.72
TTC39CQ8N584 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.91□□□□□ -2.72
TTC39CQ8N584 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.91□□□□□ -2.72
TTC39CQ8N584 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.91□□□□□ -2.72
TTC39CQ8N584 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.91□□□□□ -2.72
TTC39CQ8N584 U4.2-201ENST00000618561 85 ntBASIC-1.91□□□□□ -2.72
TTC39CQ8N584 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.92□□□□□ -2.72
TTC39CQ8N584 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.93□□□□□ -2.72
TTC39CQ8N584 RNA5SP405-201ENST00000363059 114 ntBASIC-1.94□□□□□ -2.72
TTC39CQ8N584 RNU6-258P-201ENST00000390884 101 ntBASIC-1.94□□□□□ -2.72
TTC39CQ8N584 SNORD115-31-201ENST00000365318 82 ntBASIC-1.96□□□□□ -2.72
TTC39CQ8N584 SNORD116-24-201ENST00000384549 92 ntBASIC-1.96□□□□□ -2.72
TTC39CQ8N584 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.96□□□□□ -2.72
TTC39CQ8N584 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.97□□□□□ -2.72
TTC39CQ8N584 RNU6-118P-201ENST00000516552 102 ntBASIC-1.97□□□□□ -2.72
TTC39CQ8N584 U2.18-201ENST00000622185 84 ntBASIC-1.97□□□□□ -2.72
TTC39CQ8N584 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-1.97□□□□□ -2.72
TTC39CQ8N584 MIR548AA1-201ENST00000384971 97 ntBASIC-1.98□□□□□ -2.73
TTC39CQ8N584 MIR3139-201ENST00000579145 76 ntBASIC-1.98□□□□□ -2.73
TTC39CQ8N584 MIR3134-201ENST00000579433 74 ntBASIC-1.98□□□□□ -2.73
TTC39CQ8N584 MIR548W-201ENST00000581970 74 ntBASIC-1.98□□□□□ -2.73
TTC39CQ8N584 AC013734.1-201ENST00000619329 111 ntBASIC-1.98□□□□□ -2.73
TTC39CQ8N584 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.98□□□□□ -2.73
TTC39CQ8N584 SNORA41B-201ENST00000384785 128 ntBASIC-1.99□□□□□ -2.73
TTC39CQ8N584 Y_RNA.55-201ENST00000362797 102 ntBASIC-2□□□□□ -2.73
TTC39CQ8N584 RNU6-1034P-201ENST00000365335 101 ntBASIC-2□□□□□ -2.73
TTC39CQ8N584 RNU6-787P-201ENST00000384032 107 ntBASIC-2□□□□□ -2.73
TTC39CQ8N584 RNU6-1267P-201ENST00000410747 107 ntBASIC-2□□□□□ -2.73
TTC39CQ8N584 RNU6-687P-201ENST00000516443 89 ntBASIC-2□□□□□ -2.73
TTC39CQ8N584 MIR23C-201ENST00000579846 100 ntBASIC-2□□□□□ -2.73
TTC39CQ8N584 MIR3170-201ENST00000582699 77 ntBASIC-2□□□□□ -2.73
TTC39CQ8N584 SNORD114-3-201ENST00000364969 75 ntBASIC-2.01□□□□□ -2.73
TTC39CQ8N584 RNU6-411P-201ENST00000384451 107 ntBASIC-2.01□□□□□ -2.73
TTC39CQ8N584 AC005520.4-201ENST00000604337 90 ntBASIC-2.01□□□□□ -2.73
TTC39CQ8N584 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.01□□□□□ -2.73
TTC39CQ8N584 RNU6-194P-201ENST00000363862 105 ntBASIC-2.02□□□□□ -2.73
TTC39CQ8N584 RNU6-542P-201ENST00000516405 103 ntBASIC-2.02□□□□□ -2.73
TTC39CQ8N584 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.02□□□□□ -2.73
TTC39CQ8N584 RNU6-1111P-201ENST00000391118 107 ntBASIC-2.03□□□□□ -2.73
TTC39CQ8N584 snoU13.10-201ENST00000459301 103 ntBASIC-2.03□□□□□ -2.73
TTC39CQ8N584 AC062037.1-201ENST00000605302 128 ntBASIC-2.04□□□□□ -2.74
TTC39CQ8N584 U7.4-201ENST00000614961 63 ntBASIC-2.04□□□□□ -2.74
TTC39CQ8N584 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.04□□□□□ -2.74
TTC39CQ8N584 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.05□□□□□ -2.74
TTC39CQ8N584 SNORD1B-201ENST00000363091 84 ntBASIC-2.06□□□□□ -2.74
TTC39CQ8N584 MIR4723-201ENST00000585070 81 ntBASIC-2.06□□□□□ -2.74
TTC39CQ8N584 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.06□□□□□ -2.74
TTC39CQ8N584 MT-TM-201ENST00000387377 68 ntBASIC-2.07□□□□□ -2.74
TTC39CQ8N584 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.07□□□□□ -2.74
TTC39CQ8N584 RNY4P27-201ENST00000363341 96 ntBASIC-2.08□□□□□ -2.74
TTC39CQ8N584 RNU6-995P-201ENST00000391244 107 ntBASIC-2.09□□□□□ -2.74
TTC39CQ8N584 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.09□□□□□ -2.74
TTC39CQ8N584 MIR4748-201ENST00000578076 82 ntBASIC-2.09□□□□□ -2.74
TTC39CQ8N584 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2.09□□□□□ -2.74
TTC39CQ8N584 U6.97-201ENST00000636904 101 ntBASIC-2.09□□□□□ -2.74
TTC39CQ8N584 RNU6-1015P-201ENST00000517121 99 ntBASIC-2.11□□□□□ -2.75
TTC39CQ8N584 RNA5SP170-201ENST00000517150 101 ntBASIC-2.11□□□□□ -2.75
TTC39CQ8N584 RNU6-92P-201ENST00000605893 104 ntBASIC-2.11□□□□□ -2.75
TTC39CQ8N584 MIR3202-2-201ENST00000635980 79 ntBASIC-2.11□□□□□ -2.75
TTC39CQ8N584 MIR496-201ENST00000385226 102 ntBASIC-2.12□□□□□ -2.75
TTC39CQ8N584 MIR466-201ENST00000580653 84 ntBASIC-2.12□□□□□ -2.75
TTC39CQ8N584 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.12□□□□□ -2.75
TTC39CQ8N584 RNU6-247P-201ENST00000362636 107 ntBASIC-2.13□□□□□ -2.75
TTC39CQ8N584 MIR581-201ENST00000384895 96 ntBASIC-2.14□□□□□ -2.75
TTC39CQ8N584 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.14□□□□□ -2.75
TTC39CQ8N584 MIR1207-201ENST00000408249 87 ntBASIC-2.14□□□□□ -2.75
TTC39CQ8N584 RNY3P8-201ENST00000411366 126 ntBASIC-2.14□□□□□ -2.75
TTC39CQ8N584 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.15□□□□□ -2.75
TTC39CQ8N584 RNU6-172P-201ENST00000411000 93 ntBASIC-2.16□□□□□ -2.76
TTC39CQ8N584 RNU6-634P-201ENST00000459134 106 ntBASIC-2.16□□□□□ -2.76
TTC39CQ8N584 RNU7-151P-201ENST00000516930 53 ntBASIC-2.17□□□□□ -2.76
TTC39CQ8N584 SNORA27.2-201ENST00000363365 126 ntBASIC-2.18□□□□□ -2.76
TTC39CQ8N584 RNU6-669P-201ENST00000365575 107 ntBASIC-2.18□□□□□ -2.76
TTC39CQ8N584 RNU6-974P-201ENST00000384099 108 ntBASIC-2.18□□□□□ -2.76
TTC39CQ8N584 Y_RNA.443-201ENST00000384135 111 ntBASIC-2.18□□□□□ -2.76
TTC39CQ8N584 FTX_4.1-201ENST00000616291 147 ntBASIC-2.18□□□□□ -2.76
TTC39CQ8N584 RNU6-1298P-201ENST00000362456 101 ntBASIC-2.19□□□□□ -2.76
TTC39CQ8N584 SNORD73B-201ENST00000364394 72 ntBASIC-2.19□□□□□ -2.76
TTC39CQ8N584 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.19□□□□□ -2.76
TTC39CQ8N584 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.19□□□□□ -2.76
TTC39CQ8N584 AC097484.2-201ENST00000509147 251 ntBASIC-2.2□□□□□ -2.76
TTC39CQ8N584 RNU6-663P-201ENST00000391105 106 ntBASIC-2.21□□□□□ -2.76
TTC39CQ8N584 MIR7978-201ENST00000636158 59 ntBASIC-2.21□□□□□ -2.76
TTC39CQ8N584 SNORD63.2-201ENST00000516303 64 ntBASIC-2.22□□□□□ -2.76
TTC39CQ8N584 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.23□□□□□ -2.77
TTC39CQ8N584 MIR579-201ENST00000385221 98 ntBASIC-2.23□□□□□ -2.77
TTC39CQ8N584 RNU6-523P-201ENST00000516304 54 ntBASIC-2.23□□□□□ -2.77
TTC39CQ8N584 RNU6-119P-201ENST00000364882 107 ntBASIC-2.24□□□□□ -2.77
TTC39CQ8N584 Y_RNA.475-201ENST00000384345 101 ntBASIC-2.24□□□□□ -2.77
TTC39CQ8N584 MIR125B1-201ENST00000385236 88 ntBASIC-2.24□□□□□ -2.77
TTC39CQ8N584 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.24□□□□□ -2.77
TTC39CQ8N584 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.24□□□□□ -2.77
TTC39CQ8N584 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.24□□□□□ -2.77
Retrieved 100 of 98,524 protein–RNA pairs in 8.2 ms