Protein–RNA interactions for Protein: Q8N309

LRRC43, Leucine-rich repeat-containing protein 43, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC43Q8N309 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.67□□□□□ -2.68
LRRC43Q8N309 SNORD116-16-201ENST00000384533 92 ntBASIC-1.68□□□□□ -2.68
LRRC43Q8N309 MIR23C-201ENST00000579846 100 ntBASIC-1.68□□□□□ -2.68
LRRC43Q8N309 SNORD1B-201ENST00000363091 84 ntBASIC-1.69□□□□□ -2.68
LRRC43Q8N309 RNU6-979P-201ENST00000383896 107 ntBASIC-1.69□□□□□ -2.68
LRRC43Q8N309 RNA5SP89-201ENST00000410300 108 ntBASIC-1.69□□□□□ -2.68
LRRC43Q8N309 MIR548W-201ENST00000581970 74 ntBASIC-1.69□□□□□ -2.68
LRRC43Q8N309 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.69□□□□□ -2.68
LRRC43Q8N309 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.69□□□□□ -2.68
LRRC43Q8N309 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.7□□□□□ -2.68
LRRC43Q8N309 MT-TM-201ENST00000387377 68 ntBASIC-1.7□□□□□ -2.68
LRRC43Q8N309 RNA5SP405-201ENST00000363059 114 ntBASIC-1.71□□□□□ -2.68
LRRC43Q8N309 SNORD115-31-201ENST00000365318 82 ntBASIC-1.71□□□□□ -2.68
LRRC43Q8N309 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.71□□□□□ -2.68
LRRC43Q8N309 RNU4-88P-201ENST00000411220 86 ntBASIC-1.71□□□□□ -2.68
LRRC43Q8N309 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.72□□□□□ -2.68
LRRC43Q8N309 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.72□□□□□ -2.68
LRRC43Q8N309 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.73□□□□□ -2.69
LRRC43Q8N309 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.73□□□□□ -2.69
LRRC43Q8N309 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.73□□□□□ -2.69
LRRC43Q8N309 MIR125B1-201ENST00000385236 88 ntBASIC-1.73□□□□□ -2.69
LRRC43Q8N309 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.73□□□□□ -2.69
LRRC43Q8N309 MIR4712-201ENST00000583750 82 ntBASIC-1.73□□□□□ -2.69
LRRC43Q8N309 MIR7978-201ENST00000636158 59 ntBASIC-1.73□□□□□ -2.69
LRRC43Q8N309 SNORD116-24-201ENST00000384549 92 ntBASIC-1.74□□□□□ -2.69
LRRC43Q8N309 MIR581-201ENST00000384895 96 ntBASIC-1.74□□□□□ -2.69
LRRC43Q8N309 MIR548AA1-201ENST00000384971 97 ntBASIC-1.74□□□□□ -2.69
LRRC43Q8N309 RNU6-70P-201ENST00000516438 60 ntBASIC-1.74□□□□□ -2.69
LRRC43Q8N309 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.75□□□□□ -2.69
LRRC43Q8N309 RNU6-974P-201ENST00000384099 108 ntBASIC-1.75□□□□□ -2.69
LRRC43Q8N309 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.76□□□□□ -2.69
LRRC43Q8N309 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.76□□□□□ -2.69
LRRC43Q8N309 RNY4P30-201ENST00000410216 95 ntBASIC-1.76□□□□□ -2.69
LRRC43Q8N309 RNU7-171P-201ENST00000459581 62 ntBASIC-1.76□□□□□ -2.69
LRRC43Q8N309 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.76□□□□□ -2.69
LRRC43Q8N309 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.76□□□□□ -2.69
LRRC43Q8N309 MIR494-201ENST00000349529 81 ntBASIC-1.77□□□□□ -2.69
LRRC43Q8N309 RNA5SP173-201ENST00000364857 136 ntBASIC-1.77□□□□□ -2.69
LRRC43Q8N309 RNU6-669P-201ENST00000365575 107 ntBASIC-1.77□□□□□ -2.69
LRRC43Q8N309 MIR579-201ENST00000385221 98 ntBASIC-1.77□□□□□ -2.69
LRRC43Q8N309 MIR154-201ENST00000385243 84 ntBASIC-1.77□□□□□ -2.69
LRRC43Q8N309 snoU13.10-201ENST00000459301 103 ntBASIC-1.77□□□□□ -2.69
LRRC43Q8N309 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.77□□□□□ -2.69
LRRC43Q8N309 RNU6-247P-201ENST00000362636 107 ntBASIC-1.78□□□□□ -2.69
LRRC43Q8N309 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.78□□□□□ -2.69
LRRC43Q8N309 RNU7-151P-201ENST00000516930 53 ntBASIC-1.78□□□□□ -2.69
LRRC43Q8N309 MIR1245B-201ENST00000636115 69 ntBASIC-1.78□□□□□ -2.69
LRRC43Q8N309 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.79□□□□□ -2.7
LRRC43Q8N309 RNU6-895P-201ENST00000384125 103 ntBASIC-1.79□□□□□ -2.7
LRRC43Q8N309 AL603908.1-201ENST00000406098 201 ntBASIC-1.79□□□□□ -2.7
LRRC43Q8N309 RNY3P8-201ENST00000411366 126 ntBASIC-1.79□□□□□ -2.7
LRRC43Q8N309 RNU6-523P-201ENST00000516304 54 ntBASIC-1.79□□□□□ -2.7
LRRC43Q8N309 MIR3134-201ENST00000579433 74 ntBASIC-1.79□□□□□ -2.7
LRRC43Q8N309 SNORA27.2-201ENST00000363365 126 ntBASIC-1.8□□□□□ -2.7
LRRC43Q8N309 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.8□□□□□ -2.7
LRRC43Q8N309 RNY4-201ENST00000516507 96 ntBASIC-1.8□□□□□ -2.7
LRRC43Q8N309 RNU6-172P-201ENST00000411000 93 ntBASIC-1.82□□□□□ -2.7
LRRC43Q8N309 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.82□□□□□ -2.7
LRRC43Q8N309 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.83□□□□□ -2.7
LRRC43Q8N309 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.83□□□□□ -2.7
LRRC43Q8N309 RNU6-995P-201ENST00000391244 107 ntBASIC-1.84□□□□□ -2.7
LRRC43Q8N309 SNORD63.2-201ENST00000516303 64 ntBASIC-1.84□□□□□ -2.7
LRRC43Q8N309 MIR4748-201ENST00000578076 82 ntBASIC-1.84□□□□□ -2.7
LRRC43Q8N309 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.84□□□□□ -2.7
LRRC43Q8N309 U6.97-201ENST00000636904 101 ntBASIC-1.85□□□□□ -2.71
LRRC43Q8N309 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.86□□□□□ -2.71
LRRC43Q8N309 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.86□□□□□ -2.71
LRRC43Q8N309 RNU6-687P-201ENST00000516443 89 ntBASIC-1.86□□□□□ -2.71
LRRC43Q8N309 RNU6-68P-201ENST00000516576 104 ntBASIC-1.86□□□□□ -2.71
LRRC43Q8N309 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.87□□□□□ -2.71
LRRC43Q8N309 RNU6-789P-201ENST00000517105 102 ntBASIC-1.87□□□□□ -2.71
LRRC43Q8N309 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.87□□□□□ -2.71
LRRC43Q8N309 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.88□□□□□ -2.71
LRRC43Q8N309 RNU6-787P-201ENST00000384032 107 ntBASIC-1.88□□□□□ -2.71
LRRC43Q8N309 RNU6-242P-201ENST00000384359 107 ntBASIC-1.88□□□□□ -2.71
LRRC43Q8N309 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.88□□□□□ -2.71
LRRC43Q8N309 RNU6-406P-201ENST00000516470 107 ntBASIC-1.88□□□□□ -2.71
LRRC43Q8N309 RNU6-194P-201ENST00000363862 105 ntBASIC-1.89□□□□□ -2.71
LRRC43Q8N309 MIR4666B-201ENST00000578142 81 ntBASIC-1.89□□□□□ -2.71
LRRC43Q8N309 RNU6-153P-201ENST00000364422 104 ntBASIC-1.9□□□□□ -2.71
LRRC43Q8N309 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.9□□□□□ -2.71
LRRC43Q8N309 MIR450A2-201ENST00000385022 100 ntBASIC-1.9□□□□□ -2.71
LRRC43Q8N309 MIR548N-201ENST00000408742 75 ntBASIC-1.9□□□□□ -2.71
LRRC43Q8N309 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.9□□□□□ -2.71
LRRC43Q8N309 RNU6-294P-201ENST00000364999 102 ntBASIC-1.91□□□□□ -2.72
LRRC43Q8N309 SNORD18C-201ENST00000362704 69 ntBASIC-1.92□□□□□ -2.72
LRRC43Q8N309 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.92□□□□□ -2.72
LRRC43Q8N309 RNU6-542P-201ENST00000516405 103 ntBASIC-1.92□□□□□ -2.72
LRRC43Q8N309 MIR548AI-201ENST00000579940 88 ntBASIC-1.92□□□□□ -2.72
LRRC43Q8N309 RNU6-92P-201ENST00000605893 104 ntBASIC-1.92□□□□□ -2.72
LRRC43Q8N309 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.93□□□□□ -2.72
LRRC43Q8N309 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.94□□□□□ -2.72
LRRC43Q8N309 U2.22-201ENST00000636441 106 ntBASIC-1.94□□□□□ -2.72
LRRC43Q8N309 AC097484.2-201ENST00000509147 251 ntBASIC-1.95□□□□□ -2.72
LRRC43Q8N309 FTX_4.1-201ENST00000616291 147 ntBASIC-1.95□□□□□ -2.72
LRRC43Q8N309 SNORD60.1-201ENST00000362451 73 ntBASIC-1.96□□□□□ -2.72
LRRC43Q8N309 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.96□□□□□ -2.72
LRRC43Q8N309 SNORD113-3-201ENST00000364830 72 ntBASIC-1.97□□□□□ -2.72
LRRC43Q8N309 RNU6-411P-201ENST00000384451 107 ntBASIC-1.97□□□□□ -2.72
LRRC43Q8N309 RNU7-160P-201ENST00000516660 62 ntBASIC-1.97□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 179.4 ms