Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 RNA5SP26-201ENST00000362406 119 ntBASIC-1.23□□□□□ -2.61
CCDC71Q8IV32 RNU6-787P-201ENST00000384032 107 ntBASIC-1.24□□□□□ -2.61
CCDC71Q8IV32 MIR4490-201ENST00000582647 84 ntBASIC-1.24□□□□□ -2.61
CCDC71Q8IV32 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.25□□□□□ -2.61
CCDC71Q8IV32 AP002795.1-201ENST00000534879 84 ntBASIC-1.25□□□□□ -2.61
CCDC71Q8IV32 RNU6-895P-201ENST00000384125 103 ntBASIC-1.26□□□□□ -2.61
CCDC71Q8IV32 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.26□□□□□ -2.61
CCDC71Q8IV32 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.26□□□□□ -2.61
CCDC71Q8IV32 MIR507-201ENST00000385234 94 ntBASIC-1.26□□□□□ -2.61
CCDC71Q8IV32 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.26□□□□□ -2.61
CCDC71Q8IV32 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.26□□□□□ -2.61
CCDC71Q8IV32 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.26□□□□□ -2.61
CCDC71Q8IV32 AC062037.1-201ENST00000605302 128 ntBASIC-1.27□□□□□ -2.61
CCDC71Q8IV32 RNU6-598P-201ENST00000364017 105 ntBASIC-1.28□□□□□ -2.61
CCDC71Q8IV32 SNORD116-24-201ENST00000384549 92 ntBASIC-1.28□□□□□ -2.61
CCDC71Q8IV32 MIR548Q-201ENST00000408404 100 ntBASIC-1.28□□□□□ -2.61
CCDC71Q8IV32 MIR3134-201ENST00000579433 74 ntBASIC-1.28□□□□□ -2.61
CCDC71Q8IV32 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.28□□□□□ -2.61
CCDC71Q8IV32 MIR6874-201ENST00000635894 71 ntBASIC-1.28□□□□□ -2.61
CCDC71Q8IV32 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.29□□□□□ -2.62
CCDC71Q8IV32 SNORD116-16-201ENST00000384533 92 ntBASIC-1.29□□□□□ -2.62
CCDC71Q8IV32 RNU6-687P-201ENST00000516443 89 ntBASIC-1.29□□□□□ -2.62
CCDC71Q8IV32 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.29□□□□□ -2.62
CCDC71Q8IV32 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-1.29□□□□□ -2.62
CCDC71Q8IV32 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.3□□□□□ -2.62
CCDC71Q8IV32 RNU6-576P-201ENST00000390854 102 ntBASIC-1.3□□□□□ -2.62
CCDC71Q8IV32 RNA5SP170-201ENST00000517150 101 ntBASIC-1.3□□□□□ -2.62
CCDC71Q8IV32 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.3□□□□□ -2.62
CCDC71Q8IV32 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.3□□□□□ -2.62
CCDC71Q8IV32 SNORD115-31-201ENST00000365318 82 ntBASIC-1.31□□□□□ -2.62
CCDC71Q8IV32 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.32□□□□□ -2.62
CCDC71Q8IV32 RNU6-411P-201ENST00000384451 107 ntBASIC-1.32□□□□□ -2.62
CCDC71Q8IV32 U7.4-201ENST00000614961 63 ntBASIC-1.32□□□□□ -2.62
CCDC71Q8IV32 SNORA41B-201ENST00000384785 128 ntBASIC-1.34□□□□□ -2.62
CCDC71Q8IV32 Y_RNA.186-201ENST00000363899 92 ntBASIC-1.35□□□□□ -2.63
CCDC71Q8IV32 RNU6-164P-201ENST00000364604 103 ntBASIC-1.35□□□□□ -2.63
CCDC71Q8IV32 RNU6-542P-201ENST00000516405 103 ntBASIC-1.35□□□□□ -2.63
CCDC71Q8IV32 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.35□□□□□ -2.63
CCDC71Q8IV32 MIR3202-2-201ENST00000635980 79 ntBASIC-1.36□□□□□ -2.63
CCDC71Q8IV32 SNORD73B-201ENST00000364394 72 ntBASIC-1.37□□□□□ -2.63
CCDC71Q8IV32 MIR548AA1-201ENST00000384971 97 ntBASIC-1.37□□□□□ -2.63
CCDC71Q8IV32 RNU6-630P-201ENST00000391258 106 ntBASIC-1.37□□□□□ -2.63
CCDC71Q8IV32 RNU6-1121P-201ENST00000516802 109 ntBASIC-1.37□□□□□ -2.63
CCDC71Q8IV32 U2.18-201ENST00000622185 84 ntBASIC-1.37□□□□□ -2.63
CCDC71Q8IV32 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.38□□□□□ -2.63
CCDC71Q8IV32 RNU6-194P-201ENST00000363862 105 ntBASIC-1.38□□□□□ -2.63
CCDC71Q8IV32 AC090616.4-201ENST00000448026 115 ntBASIC-1.38□□□□□ -2.63
CCDC71Q8IV32 RPL35AP4-201ENST00000412007 102 ntBASIC-1.39□□□□□ -2.63
CCDC71Q8IV32 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.39□□□□□ -2.63
CCDC71Q8IV32 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.4□□□□□ -2.63
CCDC71Q8IV32 Y_RNA.566-201ENST00000384735 101 ntBASIC-1.4□□□□□ -2.63
CCDC71Q8IV32 SNORD1B-201ENST00000363091 84 ntBASIC-1.41□□□□□ -2.64
CCDC71Q8IV32 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.42□□□□□ -2.64
CCDC71Q8IV32 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.42□□□□□ -2.64
CCDC71Q8IV32 RNU6-608P-201ENST00000383927 104 ntBASIC-1.42□□□□□ -2.64
CCDC71Q8IV32 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.42□□□□□ -2.64
CCDC71Q8IV32 RNU6-634P-201ENST00000459134 106 ntBASIC-1.42□□□□□ -2.64
CCDC71Q8IV32 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.43□□□□□ -2.64
CCDC71Q8IV32 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.43□□□□□ -2.64
CCDC71Q8IV32 SNORA26.2-201ENST00000390922 122 ntBASIC-1.43□□□□□ -2.64
CCDC71Q8IV32 MIR3170-201ENST00000582699 77 ntBASIC-1.43□□□□□ -2.64
CCDC71Q8IV32 RNU6-92P-201ENST00000605893 104 ntBASIC-1.43□□□□□ -2.64
CCDC71Q8IV32 MIR520D-201ENST00000385002 87 ntBASIC-1.44□□□□□ -2.64
CCDC71Q8IV32 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.44□□□□□ -2.64
CCDC71Q8IV32 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.44□□□□□ -2.64
CCDC71Q8IV32 RNY4P29-201ENST00000410801 97 ntBASIC-1.44□□□□□ -2.64
CCDC71Q8IV32 MIR23C-201ENST00000579846 100 ntBASIC-1.44□□□□□ -2.64
CCDC71Q8IV32 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.44□□□□□ -2.64
CCDC71Q8IV32 RNU6-573P-201ENST00000383938 106 ntBASIC-1.45□□□□□ -2.64
CCDC71Q8IV32 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.45□□□□□ -2.64
CCDC71Q8IV32 RNU6-803P-201ENST00000516034 102 ntBASIC-1.45□□□□□ -2.64
CCDC71Q8IV32 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.46□□□□□ -2.64
CCDC71Q8IV32 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.46□□□□□ -2.64
CCDC71Q8IV32 Y_RNA.43-201ENST00000362670 111 ntBASIC-1.47□□□□□ -2.64
CCDC71Q8IV32 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.47□□□□□ -2.64
CCDC71Q8IV32 RNU6-663P-201ENST00000391105 106 ntBASIC-1.47□□□□□ -2.64
CCDC71Q8IV32 RNU6-995P-201ENST00000391244 107 ntBASIC-1.47□□□□□ -2.64
CCDC71Q8IV32 RNU6-279P-201ENST00000391297 101 ntBASIC-1.47□□□□□ -2.64
CCDC71Q8IV32 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.48□□□□□ -2.65
CCDC71Q8IV32 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.48□□□□□ -2.65
CCDC71Q8IV32 RNU4-88P-201ENST00000411220 86 ntBASIC-1.48□□□□□ -2.65
CCDC71Q8IV32 AC018880.2-201ENST00000414265 201 ntBASIC-1.48□□□□□ -2.65
CCDC71Q8IV32 RNU6-857P-201ENST00000515893 110 ntBASIC-1.48□□□□□ -2.65
CCDC71Q8IV32 MIR4748-201ENST00000578076 82 ntBASIC-1.48□□□□□ -2.65
CCDC71Q8IV32 RNU6-79P-201ENST00000362511 107 ntBASIC-1.49□□□□□ -2.65
CCDC71Q8IV32 MIR1255A-201ENST00000408338 113 ntBASIC-1.49□□□□□ -2.65
CCDC71Q8IV32 RNU6-400P-201ENST00000391173 106 ntBASIC-1.5□□□□□ -2.65
CCDC71Q8IV32 RNU6-172P-201ENST00000411000 93 ntBASIC-1.5□□□□□ -2.65
CCDC71Q8IV32 RNU6-523P-201ENST00000516304 54 ntBASIC-1.5□□□□□ -2.65
CCDC71Q8IV32 RNU7-151P-201ENST00000516930 53 ntBASIC-1.5□□□□□ -2.65
CCDC71Q8IV32 RNU6-247P-201ENST00000362636 107 ntBASIC-1.51□□□□□ -2.65
CCDC71Q8IV32 MIR548AM-201ENST00000584298 74 ntBASIC-1.51□□□□□ -2.65
CCDC71Q8IV32 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.51□□□□□ -2.65
CCDC71Q8IV32 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.52□□□□□ -2.65
CCDC71Q8IV32 RNU6-871P-201ENST00000516122 100 ntBASIC-1.52□□□□□ -2.65
CCDC71Q8IV32 SNORD60.1-201ENST00000362451 73 ntBASIC-1.53□□□□□ -2.65
CCDC71Q8IV32 RNU6-230P-201ENST00000362457 104 ntBASIC-1.53□□□□□ -2.65
CCDC71Q8IV32 RNU6-841P-201ENST00000383872 107 ntBASIC-1.53□□□□□ -2.65
CCDC71Q8IV32 MIR1302-4-201ENST00000408701 150 ntBASIC-1.53□□□□□ -2.65
CCDC71Q8IV32 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.53□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms