Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.42□□□□□ -2.48
UBE3DQ7Z6J8 SNORD114-31-201ENST00000363219 75 ntBASIC-0.43□□□□□ -2.48
UBE3DQ7Z6J8 RNU6-284P-201ENST00000411105 106 ntBASIC-0.43□□□□□ -2.48
UBE3DQ7Z6J8 RNA5SP275-201ENST00000363936 118 ntBASIC-0.44□□□□□ -2.48
UBE3DQ7Z6J8 SNORA3B-201ENST00000391305 131 ntBASIC-0.44□□□□□ -2.48
UBE3DQ7Z6J8 RNU6-1204P-201ENST00000363948 107 ntBASIC-0.45□□□□□ -2.48
UBE3DQ7Z6J8 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.45□□□□□ -2.48
UBE3DQ7Z6J8 MIR4645-201ENST00000583158 77 ntBASIC-0.45□□□□□ -2.48
UBE3DQ7Z6J8 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.46□□□□□ -2.48
UBE3DQ7Z6J8 RNU6-361P-201ENST00000364454 107 ntBASIC-0.46□□□□□ -2.48
UBE3DQ7Z6J8 MIR147A-201ENST00000385079 72 ntBASIC-0.46□□□□□ -2.48
UBE3DQ7Z6J8 MIR507-201ENST00000385234 94 ntBASIC-0.46□□□□□ -2.48
UBE3DQ7Z6J8 RNA5SP257-201ENST00000363023 116 ntBASIC-0.47□□□□□ -2.48
UBE3DQ7Z6J8 SNORD114-28-201ENST00000363610 72 ntBASIC-0.48□□□□□ -2.49
UBE3DQ7Z6J8 MIR196A2-201ENST00000385189 110 ntBASIC-0.48□□□□□ -2.49
UBE3DQ7Z6J8 MIR548AZ-201ENST00000616567 95 ntBASIC-0.51□□□□□ -2.49
UBE3DQ7Z6J8 RNU6-176P-201ENST00000517196 105 ntBASIC-0.52□□□□□ -2.49
UBE3DQ7Z6J8 RNY1P9-201ENST00000532431 109 ntBASIC-0.52□□□□□ -2.49
UBE3DQ7Z6J8 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-0.52□□□□□ -2.49
UBE3DQ7Z6J8 MIR6759-201ENST00000638110 65 ntBASIC-0.52□□□□□ -2.49
UBE3DQ7Z6J8 MIR4426-201ENST00000640330 63 ntBASIC-0.52□□□□□ -2.49
UBE3DQ7Z6J8 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.53□□□□□ -2.49
UBE3DQ7Z6J8 RNU6-742P-201ENST00000365289 107 ntBASIC-0.54□□□□□ -2.5
UBE3DQ7Z6J8 SNORA17.4-201ENST00000391287 132 ntBASIC-0.56□□□□□ -2.5
UBE3DQ7Z6J8 RPL35AP4-201ENST00000412007 102 ntBASIC-0.56□□□□□ -2.5
UBE3DQ7Z6J8 RNA5SP285-201ENST00000516619 119 ntBASIC-0.56□□□□□ -2.5
UBE3DQ7Z6J8 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.56□□□□□ -2.5
UBE3DQ7Z6J8 RNA5SP26-201ENST00000362406 119 ntBASIC-0.57□□□□□ -2.5
UBE3DQ7Z6J8 SNORD60-201ENST00000383903 83 ntBASIC-0.57□□□□□ -2.5
UBE3DQ7Z6J8 SNORA32.3-201ENST00000384772 121 ntBASIC-0.57□□□□□ -2.5
UBE3DQ7Z6J8 MIR545-201ENST00000385085 106 ntBASIC-0.57□□□□□ -2.5
UBE3DQ7Z6J8 RNY3P8-201ENST00000411366 126 ntBASIC-0.57□□□□□ -2.5
UBE3DQ7Z6J8 RNU6-431P-201ENST00000383874 107 ntBASIC-0.58□□□□□ -2.5
UBE3DQ7Z6J8 RPS29P8-201ENST00000445109 171 ntBASIC-0.58□□□□□ -2.5
UBE3DQ7Z6J8 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.58□□□□□ -2.5
UBE3DQ7Z6J8 AC090616.4-201ENST00000448026 115 ntBASIC-0.59□□□□□ -2.5
UBE3DQ7Z6J8 MIR4436A-201ENST00000585278 85 ntBASIC-0.59□□□□□ -2.5
UBE3DQ7Z6J8 MIR202-201ENST00000362219 110 ntBASIC-0.6□□□□□ -2.51
UBE3DQ7Z6J8 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.6□□□□□ -2.51
UBE3DQ7Z6J8 SNORD64-201ENST00000386683 67 ntBASIC-0.61□□□□□ -2.51
UBE3DQ7Z6J8 RNU6-300P-201ENST00000459080 104 ntBASIC-0.61□□□□□ -2.51
UBE3DQ7Z6J8 RNA5SP451-201ENST00000410588 110 ntBASIC-0.62□□□□□ -2.51
UBE3DQ7Z6J8 AP001180.6-201ENST00000584918 159 ntBASIC-0.62□□□□□ -2.51
UBE3DQ7Z6J8 MIR4317-201ENST00000637586 65 ntBASIC-0.62□□□□□ -2.51
UBE3DQ7Z6J8 Y_RNA.781-201ENST00000620301 103 ntBASIC-0.63□□□□□ -2.51
UBE3DQ7Z6J8 MIR6818-201ENST00000621576 65 ntBASIC-0.63□□□□□ -2.51
UBE3DQ7Z6J8 MIR548N-201ENST00000408742 75 ntBASIC-0.64□□□□□ -2.51
UBE3DQ7Z6J8 snoU83B.1-201ENST00000517136 88 ntBASIC-0.64□□□□□ -2.51
UBE3DQ7Z6J8 RNU6-1047P-201ENST00000364418 107 ntBASIC-0.65□□□□□ -2.51
UBE3DQ7Z6J8 MIR548H4-201ENST00000408689 111 ntBASIC-0.65□□□□□ -2.51
UBE3DQ7Z6J8 MIR3681-201ENST00000580089 72 ntBASIC-0.65□□□□□ -2.51
UBE3DQ7Z6J8 MIR4802-201ENST00000581881 80 ntBASIC-0.66□□□□□ -2.52
UBE3DQ7Z6J8 MIR382-201ENST00000637119 76 ntBASIC-0.66□□□□□ -2.52
UBE3DQ7Z6J8 MIR101-1-201ENST00000362265 75 ntBASIC-0.67□□□□□ -2.52
UBE3DQ7Z6J8 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.67□□□□□ -2.52
UBE3DQ7Z6J8 RNU6-822P-201ENST00000362707 106 ntBASIC-0.68□□□□□ -2.52
UBE3DQ7Z6J8 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.68□□□□□ -2.52
UBE3DQ7Z6J8 AC018880.2-201ENST00000414265 201 ntBASIC-0.69□□□□□ -2.52
UBE3DQ7Z6J8 RNU6-986P-201ENST00000363133 102 ntBASIC-0.7□□□□□ -2.52
UBE3DQ7Z6J8 AC120024.2-201ENST00000576526 175 ntBASIC-0.7□□□□□ -2.52
UBE3DQ7Z6J8 MIR5589-201ENST00000579442 60 ntBASIC-0.7□□□□□ -2.52
UBE3DQ7Z6J8 RNU6-164P-201ENST00000364604 103 ntBASIC-0.71□□□□□ -2.52
UBE3DQ7Z6J8 MIR224-201ENST00000384889 81 ntBASIC-0.71□□□□□ -2.52
UBE3DQ7Z6J8 MIR4493-201ENST00000584016 73 ntBASIC-0.71□□□□□ -2.52
UBE3DQ7Z6J8 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.72□□□□□ -2.52
UBE3DQ7Z6J8 MIR604-201ENST00000384880 94 ntBASIC-0.73□□□□□ -2.53
UBE3DQ7Z6J8 Y_RNA.129-201ENST00000363392 110 ntBASIC-0.75□□□□□ -2.53
UBE3DQ7Z6J8 SNORD114-25-201ENST00000363742 72 ntBASIC-0.75□□□□□ -2.53
UBE3DQ7Z6J8 RNU6-1326P-201ENST00000391262 107 ntBASIC-0.75□□□□□ -2.53
UBE3DQ7Z6J8 RNU4-63P-201ENST00000411313 118 ntBASIC-0.76□□□□□ -2.53
UBE3DQ7Z6J8 MIR4636-201ENST00000582271 80 ntBASIC-0.76□□□□□ -2.53
UBE3DQ7Z6J8 AC013734.1-201ENST00000619329 111 ntBASIC-0.76□□□□□ -2.53
UBE3DQ7Z6J8 SNORD18C-201ENST00000362704 69 ntBASIC-0.77□□□□□ -2.53
UBE3DQ7Z6J8 RNU6-576P-201ENST00000390854 102 ntBASIC-0.77□□□□□ -2.53
UBE3DQ7Z6J8 Z95118.1-201ENST00000421372 247 ntBASIC-0.77□□□□□ -2.53
UBE3DQ7Z6J8 RNU6-758P-201ENST00000516292 89 ntBASIC-0.77□□□□□ -2.53
UBE3DQ7Z6J8 RNU6-59P-201ENST00000384787 107 ntBASIC-0.78□□□□□ -2.53
UBE3DQ7Z6J8 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.78□□□□□ -2.53
UBE3DQ7Z6J8 RNU6-79P-201ENST00000362511 107 ntBASIC-0.79□□□□□ -2.54
UBE3DQ7Z6J8 RNA5SP368-201ENST00000364298 116 ntBASIC-0.8□□□□□ -2.54
UBE3DQ7Z6J8 RNU6-563P-201ENST00000364872 108 ntBASIC-0.81□□□□□ -2.54
UBE3DQ7Z6J8 MIR379-201ENST00000362218 67 ntBASIC-0.82□□□□□ -2.54
UBE3DQ7Z6J8 Y_RNA.345-201ENST00000365384 92 ntBASIC-0.83□□□□□ -2.54
UBE3DQ7Z6J8 MT-TQ-201ENST00000387372 72 ntBASIC-0.83□□□□□ -2.54
UBE3DQ7Z6J8 Y_RNA.223-201ENST00000364290 113 ntBASIC-0.84□□□□□ -2.54
UBE3DQ7Z6J8 MIR196A1-201ENST00000388006 70 ntBASIC-0.86□□□□□ -2.55
UBE3DQ7Z6J8 U6.97-201ENST00000636904 101 ntBASIC-0.86□□□□□ -2.55
UBE3DQ7Z6J8 MIR581-201ENST00000384895 96 ntBASIC-0.87□□□□□ -2.55
UBE3DQ7Z6J8 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.88□□□□□ -2.55
UBE3DQ7Z6J8 RNU6-1008P-201ENST00000384160 104 ntBASIC-0.88□□□□□ -2.55
UBE3DQ7Z6J8 RNU6-400P-201ENST00000391173 106 ntBASIC-0.88□□□□□ -2.55
UBE3DQ7Z6J8 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.89□□□□□ -2.55
UBE3DQ7Z6J8 AL500527.2-201ENST00000454105 95 ntBASIC-0.89□□□□□ -2.55
UBE3DQ7Z6J8 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-0.89□□□□□ -2.55
UBE3DQ7Z6J8 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.92□□□□□ -2.56
UBE3DQ7Z6J8 SNORD95.1-201ENST00000364099 68 ntBASIC-0.94□□□□□ -2.56
UBE3DQ7Z6J8 RNU6-68P-201ENST00000516576 104 ntBASIC-0.94□□□□□ -2.56
UBE3DQ7Z6J8 SNORD114-15-201ENST00000364687 72 ntBASIC-0.96□□□□□ -2.56
UBE3DQ7Z6J8 SNORD83B-201ENST00000386745 93 ntBASIC-0.96□□□□□ -2.56
UBE3DQ7Z6J8 RNA5SP25-201ENST00000410815 110 ntBASIC-0.96□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 205.3 ms