Protein–RNA interactions for Protein: Q7RTT3

SSX9, Protein SSX9, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9Q7RTT3 U6.97-201ENST00000636904 101 ntBASIC-3.12□□□□□ -2.91
SSX9Q7RTT3 RNU6-669P-201ENST00000365575 107 ntBASIC-3.13□□□□□ -2.91
SSX9Q7RTT3 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-3.13□□□□□ -2.91
SSX9Q7RTT3 Y_RNA.186-201ENST00000363899 92 ntBASIC-3.14□□□□□ -2.91
SSX9Q7RTT3 RNU6-172P-201ENST00000411000 93 ntBASIC-3.15□□□□□ -2.91
SSX9Q7RTT3 MTRNR2L9-201ENST00000622562 75 ntBASIC-3.15□□□□□ -2.91
SSX9Q7RTT3 Y_RNA.647-201ENST00000459194 112 ntBASIC-3.17□□□□□ -2.92
SSX9Q7RTT3 Y_RNA.640-201ENST00000459296 112 ntBASIC-3.17□□□□□ -2.92
SSX9Q7RTT3 AC005520.4-201ENST00000604337 90 ntBASIC-3.17□□□□□ -2.92
SSX9Q7RTT3 Y_RNA.803-201ENST00000614432 112 ntBASIC-3.17□□□□□ -2.92
SSX9Q7RTT3 Y_RNA.815-201ENST00000616655 112 ntBASIC-3.17□□□□□ -2.92
SSX9Q7RTT3 Y_RNA.795-201ENST00000619475 112 ntBASIC-3.17□□□□□ -2.92
SSX9Q7RTT3 Y_RNA.827-201ENST00000638104 112 ntBASIC-3.17□□□□□ -2.92
SSX9Q7RTT3 RNU6-675P-201ENST00000384236 104 ntBASIC-3.18□□□□□ -2.92
SSX9Q7RTT3 RNU6-794P-201ENST00000517261 64 ntBASIC-3.18□□□□□ -2.92
SSX9Q7RTT3 MIR7978-201ENST00000636158 59 ntBASIC-3.19□□□□□ -2.92
SSX9Q7RTT3 Y_RNA.607-201ENST00000410597 98 ntBASIC-3.21□□□□□ -2.92
SSX9Q7RTT3 RNU6-81P-201ENST00000365608 104 ntBASIC-3.22□□□□□ -2.92
SSX9Q7RTT3 RNU6-209P-201ENST00000384118 107 ntBASIC-3.22□□□□□ -2.92
SSX9Q7RTT3 Y_RNA.513-201ENST00000384522 100 ntBASIC-3.22□□□□□ -2.92
SSX9Q7RTT3 RNU6-315P-201ENST00000362666 107 ntBASIC-3.23□□□□□ -2.93
SSX9Q7RTT3 SNORD18C-201ENST00000362704 69 ntBASIC-3.23□□□□□ -2.93
SSX9Q7RTT3 Y_RNA.273-201ENST00000364703 102 ntBASIC-3.23□□□□□ -2.93
SSX9Q7RTT3 MIR488-201ENST00000365739 83 ntBASIC-3.23□□□□□ -2.93
SSX9Q7RTT3 RNU6-1168P-201ENST00000390831 104 ntBASIC-3.23□□□□□ -2.93
SSX9Q7RTT3 RNY3P8-201ENST00000411366 126 ntBASIC-3.23□□□□□ -2.93
SSX9Q7RTT3 RNU6-844P-201ENST00000517175 102 ntBASIC-3.23□□□□□ -2.93
SSX9Q7RTT3 RNU6-523P-201ENST00000516304 54 ntBASIC-3.24□□□□□ -2.93
SSX9Q7RTT3 Y_RNA.321-201ENST00000365149 102 ntBASIC-3.26□□□□□ -2.93
SSX9Q7RTT3 RNU6-895P-201ENST00000384125 103 ntBASIC-3.26□□□□□ -2.93
SSX9Q7RTT3 RNU6-1241P-201ENST00000384536 107 ntBASIC-3.26□□□□□ -2.93
SSX9Q7RTT3 MIR125B1-201ENST00000385236 88 ntBASIC-3.26□□□□□ -2.93
SSX9Q7RTT3 Y_RNA.313-201ENST00000365095 103 ntBASIC-3.27□□□□□ -2.93
SSX9Q7RTT3 Y_RNA.349-201ENST00000365406 102 ntBASIC-3.28□□□□□ -2.93
SSX9Q7RTT3 MIR154-201ENST00000385243 84 ntBASIC-3.28□□□□□ -2.93
SSX9Q7RTT3 RNU6-789P-201ENST00000517105 102 ntBASIC-3.28□□□□□ -2.93
SSX9Q7RTT3 Y_RNA.17-201ENST00000362433 111 ntBASIC-3.29□□□□□ -2.94
SSX9Q7RTT3 RNU6-230P-201ENST00000362457 104 ntBASIC-3.29□□□□□ -2.94
SSX9Q7RTT3 RNU6-22P-201ENST00000384355 107 ntBASIC-3.29□□□□□ -2.94
SSX9Q7RTT3 Y_RNA.519-201ENST00000384553 102 ntBASIC-3.29□□□□□ -2.94
SSX9Q7RTT3 RNU6-141P-201ENST00000410499 105 ntBASIC-3.29□□□□□ -2.94
SSX9Q7RTT3 snoMBII-202.2-201ENST00000517263 86 ntBASIC-3.29□□□□□ -2.94
SSX9Q7RTT3 Y_RNA.291-201ENST00000364886 113 ntBASIC-3.3□□□□□ -2.94
SSX9Q7RTT3 Y_RNA.443-201ENST00000384135 111 ntBASIC-3.3□□□□□ -2.94
SSX9Q7RTT3 Y_RNA.139-201ENST00000363464 102 ntBASIC-3.31□□□□□ -2.94
SSX9Q7RTT3 RNU6-974P-201ENST00000384099 108 ntBASIC-3.31□□□□□ -2.94
SSX9Q7RTT3 SNORD116-24-201ENST00000384549 92 ntBASIC-3.31□□□□□ -2.94
SSX9Q7RTT3 SNX3P1Y-201ENST00000615757 176 ntBASIC-3.31□□□□□ -2.94
SSX9Q7RTT3 RNU6-1134P-201ENST00000365156 101 ntBASIC-3.32□□□□□ -2.94
SSX9Q7RTT3 RNU6-70P-201ENST00000516438 60 ntBASIC-3.32□□□□□ -2.94
SSX9Q7RTT3 RNU6-1079P-201ENST00000362861 110 ntBASIC-3.33□□□□□ -2.94
SSX9Q7RTT3 RNU6-640P-201ENST00000363693 105 ntBASIC-3.33□□□□□ -2.94
SSX9Q7RTT3 Y_RNA.316-201ENST00000365118 111 ntBASIC-3.33□□□□□ -2.94
SSX9Q7RTT3 Y_RNA.397-201ENST00000383950 98 ntBASIC-3.33□□□□□ -2.94
SSX9Q7RTT3 RNU6-1117P-201ENST00000384525 104 ntBASIC-3.33□□□□□ -2.94
SSX9Q7RTT3 RNU6-1154P-201ENST00000391001 104 ntBASIC-3.33□□□□□ -2.94
SSX9Q7RTT3 IGLL4P-201ENST00000614590 133 ntBASIC-3.34□□□□□ -2.94
SSX9Q7RTT3 Y_RNA.73-201ENST00000362910 113 ntBASIC-3.35□□□□□ -2.95
SSX9Q7RTT3 RNY1P1-201ENST00000364372 112 ntBASIC-3.35□□□□□ -2.95
SSX9Q7RTT3 RNU6-32P-201ENST00000383948 107 ntBASIC-3.35□□□□□ -2.95
SSX9Q7RTT3 RNU6-13P-201ENST00000384248 107 ntBASIC-3.35□□□□□ -2.95
SSX9Q7RTT3 RNU6-12P-201ENST00000384604 107 ntBASIC-3.35□□□□□ -2.95
SSX9Q7RTT3 RNU6-41P-201ENST00000384741 107 ntBASIC-3.35□□□□□ -2.95
SSX9Q7RTT3 TMSB4XP3-201ENST00000445144 114 ntBASIC-3.36□□□□□ -2.95
SSX9Q7RTT3 RNU6-520P-201ENST00000384717 104 ntBASIC-3.37□□□□□ -2.95
SSX9Q7RTT3 MIR581-201ENST00000384895 96 ntBASIC-3.37□□□□□ -2.95
SSX9Q7RTT3 RNU6-313P-201ENST00000516317 112 ntBASIC-3.37□□□□□ -2.95
SSX9Q7RTT3 RNU7-160P-201ENST00000516660 62 ntBASIC-3.37□□□□□ -2.95
SSX9Q7RTT3 Y_RNA.629-201ENST00000411368 105 ntBASIC-3.38□□□□□ -2.95
SSX9Q7RTT3 RNU6-542P-201ENST00000516405 103 ntBASIC-3.38□□□□□ -2.95
SSX9Q7RTT3 RNU6-92P-201ENST00000605893 104 ntBASIC-3.38□□□□□ -2.95
SSX9Q7RTT3 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-3.38□□□□□ -2.95
SSX9Q7RTT3 Y_RNA.593-201ENST00000410292 98 ntBASIC-3.39□□□□□ -2.95
SSX9Q7RTT3 MIR5588-201ENST00000581890 63 ntBASIC-3.4□□□□□ -2.95
SSX9Q7RTT3 Y_RNA.69-201ENST00000362885 109 ntBASIC-3.41□□□□□ -2.96
SSX9Q7RTT3 SNORD113-3-201ENST00000364830 72 ntBASIC-3.41□□□□□ -2.96
SSX9Q7RTT3 SNORD60-201ENST00000383903 83 ntBASIC-3.41□□□□□ -2.96
SSX9Q7RTT3 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-3.41□□□□□ -2.96
SSX9Q7RTT3 MIRLET7A2-201ENST00000362105 72 ntBASIC-3.42□□□□□ -2.96
SSX9Q7RTT3 RNU6-828P-201ENST00000364876 107 ntBASIC-3.42□□□□□ -2.96
SSX9Q7RTT3 MIR7110-201ENST00000612638 86 ntBASIC-3.43□□□□□ -2.96
SSX9Q7RTT3 RNU6-649P-201ENST00000384463 107 ntBASIC-3.44□□□□□ -2.96
SSX9Q7RTT3 MIR548AI-201ENST00000579940 88 ntBASIC-3.44□□□□□ -2.96
SSX9Q7RTT3 MIR202-201ENST00000362219 110 ntBASIC-3.45□□□□□ -2.96
SSX9Q7RTT3 Y_RNA.59-201ENST00000362828 102 ntBASIC-3.45□□□□□ -2.96
SSX9Q7RTT3 RNU6-979P-201ENST00000383896 107 ntBASIC-3.45□□□□□ -2.96
SSX9Q7RTT3 MIR4712-201ENST00000583750 82 ntBASIC-3.45□□□□□ -2.96
SSX9Q7RTT3 RNU6-1324P-201ENST00000384222 107 ntBASIC-3.46□□□□□ -2.96
SSX9Q7RTT3 MIR1245B-201ENST00000636115 69 ntBASIC-3.46□□□□□ -2.96
SSX9Q7RTT3 MIR548N-201ENST00000408742 75 ntBASIC-3.47□□□□□ -2.96
SSX9Q7RTT3 SNORD60.1-201ENST00000362451 73 ntBASIC-3.48□□□□□ -2.97
SSX9Q7RTT3 RNU6-810P-201ENST00000364001 107 ntBASIC-3.48□□□□□ -2.97
SSX9Q7RTT3 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-3.48□□□□□ -2.97
SSX9Q7RTT3 RNU6-147P-201ENST00000383983 107 ntBASIC-3.49□□□□□ -2.97
SSX9Q7RTT3 RNU6-1121P-201ENST00000516802 109 ntBASIC-3.49□□□□□ -2.97
SSX9Q7RTT3 RNU6-231P-201ENST00000517122 103 ntBASIC-3.5□□□□□ -2.97
SSX9Q7RTT3 snosnR66.1-201ENST00000391095 99 ntBASIC-3.51□□□□□ -2.97
SSX9Q7RTT3 SNORD116.2-201ENST00000391251 93 ntBASIC-3.51□□□□□ -2.97
SSX9Q7RTT3 Y_RNA.566-201ENST00000384735 101 ntBASIC-3.52□□□□□ -2.97
SSX9Q7RTT3 RNU7-171P-201ENST00000459581 62 ntBASIC-3.52□□□□□ -2.97
Retrieved 100 of 98,524 protein–RNA pairs in 205.4 ms