Protein–RNA interactions for Protein: Q6IEG0

SNRNP48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, humanhuman

Known RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48Q6IEG0 MIR3134-201ENST00000579433 74 ntBASIC-1.76□□□□□ -2.69
SNRNP48Q6IEG0 MIR5582-201ENST00000579697 68 ntBASIC-1.76□□□□□ -2.69
SNRNP48Q6IEG0 MIR548AA1-201ENST00000384971 97 ntBASIC-1.78□□□□□ -2.69
SNRNP48Q6IEG0 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.79□□□□□ -2.7
SNRNP48Q6IEG0 RNU6-787P-201ENST00000384032 107 ntBASIC-1.79□□□□□ -2.7
SNRNP48Q6IEG0 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.79□□□□□ -2.7
SNRNP48Q6IEG0 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.79□□□□□ -2.7
SNRNP48Q6IEG0 RNU6-820P-201ENST00000384273 107 ntBASIC-1.8□□□□□ -2.7
SNRNP48Q6IEG0 RNU6-687P-201ENST00000516443 89 ntBASIC-1.8□□□□□ -2.7
SNRNP48Q6IEG0 SNORD1B-201ENST00000363091 84 ntBASIC-1.81□□□□□ -2.7
SNRNP48Q6IEG0 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.81□□□□□ -2.7
SNRNP48Q6IEG0 MIR3170-201ENST00000582699 77 ntBASIC-1.81□□□□□ -2.7
SNRNP48Q6IEG0 RNU6-79P-201ENST00000362511 107 ntBASIC-1.82□□□□□ -2.7
SNRNP48Q6IEG0 MIR487B-201ENST00000385021 84 ntBASIC-1.82□□□□□ -2.7
SNRNP48Q6IEG0 AC018880.2-201ENST00000414265 201 ntBASIC-1.82□□□□□ -2.7
SNRNP48Q6IEG0 RNU6-228P-201ENST00000362700 106 ntBASIC-1.83□□□□□ -2.7
SNRNP48Q6IEG0 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.83□□□□□ -2.7
SNRNP48Q6IEG0 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.83□□□□□ -2.7
SNRNP48Q6IEG0 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.84□□□□□ -2.7
SNRNP48Q6IEG0 AC062037.1-201ENST00000605302 128 ntBASIC-1.85□□□□□ -2.71
SNRNP48Q6IEG0 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.86□□□□□ -2.71
SNRNP48Q6IEG0 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.87□□□□□ -2.71
SNRNP48Q6IEG0 RNU6-411P-201ENST00000384451 107 ntBASIC-1.87□□□□□ -2.71
SNRNP48Q6IEG0 RNU6-542P-201ENST00000516405 103 ntBASIC-1.87□□□□□ -2.71
SNRNP48Q6IEG0 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-1.87□□□□□ -2.71
SNRNP48Q6IEG0 RNU6-247P-201ENST00000362636 107 ntBASIC-1.89□□□□□ -2.71
SNRNP48Q6IEG0 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.89□□□□□ -2.71
SNRNP48Q6IEG0 RNU6-995P-201ENST00000391244 107 ntBASIC-1.89□□□□□ -2.71
SNRNP48Q6IEG0 AC108019.1-201ENST00000512540 175 ntBASIC-1.89□□□□□ -2.71
SNRNP48Q6IEG0 RNY4-201ENST00000516507 96 ntBASIC-1.89□□□□□ -2.71
SNRNP48Q6IEG0 RNU7-151P-201ENST00000516930 53 ntBASIC-1.89□□□□□ -2.71
SNRNP48Q6IEG0 MIR23C-201ENST00000579846 100 ntBASIC-1.89□□□□□ -2.71
SNRNP48Q6IEG0 U7.4-201ENST00000614961 63 ntBASIC-1.89□□□□□ -2.71
SNRNP48Q6IEG0 RNU6-400P-201ENST00000391173 106 ntBASIC-1.9□□□□□ -2.71
SNRNP48Q6IEG0 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.9□□□□□ -2.71
SNRNP48Q6IEG0 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.91□□□□□ -2.72
SNRNP48Q6IEG0 RNU6-172P-201ENST00000411000 93 ntBASIC-1.91□□□□□ -2.72
SNRNP48Q6IEG0 RNU6-92P-201ENST00000605893 104 ntBASIC-1.91□□□□□ -2.72
SNRNP48Q6IEG0 MIR579-201ENST00000385221 98 ntBASIC-1.92□□□□□ -2.72
SNRNP48Q6IEG0 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.92□□□□□ -2.72
SNRNP48Q6IEG0 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.92□□□□□ -2.72
SNRNP48Q6IEG0 RNU6-258P-201ENST00000390884 101 ntBASIC-1.93□□□□□ -2.72
SNRNP48Q6IEG0 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.93□□□□□ -2.72
SNRNP48Q6IEG0 MIR4756-201ENST00000577874 78 ntBASIC-1.93□□□□□ -2.72
SNRNP48Q6IEG0 MIR664B-201ENST00000626756 61 ntBASIC-1.95□□□□□ -2.72
SNRNP48Q6IEG0 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.96□□□□□ -2.72
SNRNP48Q6IEG0 RNU6-563P-201ENST00000364872 108 ntBASIC-1.96□□□□□ -2.72
SNRNP48Q6IEG0 SNORD54-201ENST00000459159 67 ntBASIC-1.96□□□□□ -2.72
SNRNP48Q6IEG0 MIR7978-201ENST00000636158 59 ntBASIC-1.96□□□□□ -2.72
SNRNP48Q6IEG0 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.97□□□□□ -2.72
SNRNP48Q6IEG0 RNU6-634P-201ENST00000459134 106 ntBASIC-1.97□□□□□ -2.72
SNRNP48Q6IEG0 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.98□□□□□ -2.73
SNRNP48Q6IEG0 AC120024.2-201ENST00000576526 175 ntBASIC-1.98□□□□□ -2.73
SNRNP48Q6IEG0 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.98□□□□□ -2.73
SNRNP48Q6IEG0 RNU6-669P-201ENST00000365575 107 ntBASIC-1.99□□□□□ -2.73
SNRNP48Q6IEG0 SNORD63.2-201ENST00000516303 64 ntBASIC-1.99□□□□□ -2.73
SNRNP48Q6IEG0 RNA5SP170-201ENST00000517150 101 ntBASIC-1.99□□□□□ -2.73
SNRNP48Q6IEG0 SNORD60.1-201ENST00000362451 73 ntBASIC-2□□□□□ -2.73
SNRNP48Q6IEG0 RNU6-663P-201ENST00000391105 106 ntBASIC-2□□□□□ -2.73
SNRNP48Q6IEG0 RNU6-118P-201ENST00000516552 102 ntBASIC-2□□□□□ -2.73
SNRNP48Q6IEG0 RNU6-1298P-201ENST00000362456 101 ntBASIC-2.01□□□□□ -2.73
SNRNP48Q6IEG0 SNORD73B-201ENST00000364394 72 ntBASIC-2.01□□□□□ -2.73
SNRNP48Q6IEG0 MIR3202-2-201ENST00000635980 79 ntBASIC-2.01□□□□□ -2.73
SNRNP48Q6IEG0 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.02□□□□□ -2.73
SNRNP48Q6IEG0 MIR125B1-201ENST00000385236 88 ntBASIC-2.02□□□□□ -2.73
SNRNP48Q6IEG0 RNU6-695P-201ENST00000391157 104 ntBASIC-2.02□□□□□ -2.73
SNRNP48Q6IEG0 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.02□□□□□ -2.73
SNRNP48Q6IEG0 SNORA27.2-201ENST00000363365 126 ntBASIC-2.03□□□□□ -2.73
SNRNP48Q6IEG0 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.03□□□□□ -2.73
SNRNP48Q6IEG0 RNA5SP93-201ENST00000362525 114 ntBASIC-2.04□□□□□ -2.74
SNRNP48Q6IEG0 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.04□□□□□ -2.74
SNRNP48Q6IEG0 RNU6-573P-201ENST00000383938 106 ntBASIC-2.05□□□□□ -2.74
SNRNP48Q6IEG0 Y_RNA.545-201ENST00000384652 105 ntBASIC-2.05□□□□□ -2.74
SNRNP48Q6IEG0 MIR3123-201ENST00000583417 75 ntBASIC-2.05□□□□□ -2.74
SNRNP48Q6IEG0 RNU6-1124P-201ENST00000384169 107 ntBASIC-2.06□□□□□ -2.74
SNRNP48Q6IEG0 RNU6-523P-201ENST00000516304 54 ntBASIC-2.06□□□□□ -2.74
SNRNP48Q6IEG0 MIR7110-201ENST00000612638 86 ntBASIC-2.06□□□□□ -2.74
SNRNP48Q6IEG0 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.06□□□□□ -2.74
SNRNP48Q6IEG0 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.07□□□□□ -2.74
SNRNP48Q6IEG0 RNU6-980P-201ENST00000516925 103 ntBASIC-2.07□□□□□ -2.74
SNRNP48Q6IEG0 MIR3139-201ENST00000579145 76 ntBASIC-2.08□□□□□ -2.74
SNRNP48Q6IEG0 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.08□□□□□ -2.74
SNRNP48Q6IEG0 RNA5SP405-201ENST00000363059 114 ntBASIC-2.09□□□□□ -2.74
SNRNP48Q6IEG0 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.09□□□□□ -2.74
SNRNP48Q6IEG0 RNU6-974P-201ENST00000384099 108 ntBASIC-2.09□□□□□ -2.74
SNRNP48Q6IEG0 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.09□□□□□ -2.74
SNRNP48Q6IEG0 SNORD30.1-201ENST00000391309 70 ntBASIC-2.09□□□□□ -2.74
SNRNP48Q6IEG0 MIR1255A-201ENST00000408338 113 ntBASIC-2.09□□□□□ -2.74
SNRNP48Q6IEG0 RNY4P29-201ENST00000410801 97 ntBASIC-2.09□□□□□ -2.74
SNRNP48Q6IEG0 RNU7-160P-201ENST00000516660 62 ntBASIC-2.09□□□□□ -2.74
SNRNP48Q6IEG0 RNU6-231P-201ENST00000517122 103 ntBASIC-2.09□□□□□ -2.74
SNRNP48Q6IEG0 SNORA25.4-201ENST00000363666 124 ntBASIC-2.1□□□□□ -2.75
SNRNP48Q6IEG0 SNORA26.2-201ENST00000390922 122 ntBASIC-2.1□□□□□ -2.75
SNRNP48Q6IEG0 RNU6-857P-201ENST00000515893 110 ntBASIC-2.1□□□□□ -2.75
SNRNP48Q6IEG0 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.11□□□□□ -2.75
SNRNP48Q6IEG0 SNORA25.5-201ENST00000363782 126 ntBASIC-2.11□□□□□ -2.75
SNRNP48Q6IEG0 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.11□□□□□ -2.75
SNRNP48Q6IEG0 Y_RNA.388-201ENST00000383919 113 ntBASIC-2.11□□□□□ -2.75
SNRNP48Q6IEG0 RNU6-194P-201ENST00000363862 105 ntBASIC-2.12□□□□□ -2.75
SNRNP48Q6IEG0 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.12□□□□□ -2.75
Retrieved 100 of 98,524 protein–RNA pairs in 9.3 ms