Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.71□□□□□ -2.68
RAB40BQ12829 SNORD116-24-201ENST00000384549 92 ntBASIC-1.71□□□□□ -2.68
RAB40BQ12829 MIR664A-201ENST00000626086 82 ntBASIC-1.71□□□□□ -2.68
RAB40BQ12829 RNY1P1-201ENST00000364372 112 ntBASIC-1.72□□□□□ -2.68
RAB40BQ12829 MIR488-201ENST00000365739 83 ntBASIC-1.72□□□□□ -2.68
RAB40BQ12829 RNU6-380P-201ENST00000410207 107 ntBASIC-1.72□□□□□ -2.68
RAB40BQ12829 RNU7-160P-201ENST00000516660 62 ntBASIC-1.72□□□□□ -2.68
RAB40BQ12829 RNU6-520P-201ENST00000384717 104 ntBASIC-1.73□□□□□ -2.69
RAB40BQ12829 AC006160.2-201ENST00000637708 154 ntBASIC-1.73□□□□□ -2.69
RAB40BQ12829 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.74□□□□□ -2.69
RAB40BQ12829 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.74□□□□□ -2.69
RAB40BQ12829 RNU6-675P-201ENST00000384236 104 ntBASIC-1.74□□□□□ -2.69
RAB40BQ12829 RNU6-844P-201ENST00000517175 102 ntBASIC-1.74□□□□□ -2.69
RAB40BQ12829 RNU6-640P-201ENST00000363693 105 ntBASIC-1.75□□□□□ -2.69
RAB40BQ12829 RNU6-315P-201ENST00000362666 107 ntBASIC-1.76□□□□□ -2.69
RAB40BQ12829 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.76□□□□□ -2.69
RAB40BQ12829 RNU6-361P-201ENST00000364454 107 ntBASIC-1.76□□□□□ -2.69
RAB40BQ12829 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.76□□□□□ -2.69
RAB40BQ12829 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.76□□□□□ -2.69
RAB40BQ12829 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.76□□□□□ -2.69
RAB40BQ12829 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.76□□□□□ -2.69
RAB40BQ12829 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.76□□□□□ -2.69
RAB40BQ12829 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.76□□□□□ -2.69
RAB40BQ12829 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.76□□□□□ -2.69
RAB40BQ12829 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.76□□□□□ -2.69
RAB40BQ12829 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.77□□□□□ -2.69
RAB40BQ12829 SNORD60-201ENST00000383903 83 ntBASIC-1.77□□□□□ -2.69
RAB40BQ12829 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.77□□□□□ -2.69
RAB40BQ12829 RNU6-68P-201ENST00000516576 104 ntBASIC-1.77□□□□□ -2.69
RAB40BQ12829 MIR548AI-201ENST00000579940 88 ntBASIC-1.77□□□□□ -2.69
RAB40BQ12829 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.77□□□□□ -2.69
RAB40BQ12829 MIR202-201ENST00000362219 110 ntBASIC-1.78□□□□□ -2.69
RAB40BQ12829 RNU6-828P-201ENST00000364876 107 ntBASIC-1.78□□□□□ -2.69
RAB40BQ12829 RNU6-649P-201ENST00000384463 107 ntBASIC-1.79□□□□□ -2.7
RAB40BQ12829 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.79□□□□□ -2.7
RAB40BQ12829 MT-TM-201ENST00000387377 68 ntBASIC-1.79□□□□□ -2.7
RAB40BQ12829 SNORA17.4-201ENST00000391287 132 ntBASIC-1.79□□□□□ -2.7
RAB40BQ12829 RNU6-789P-201ENST00000517105 102 ntBASIC-1.79□□□□□ -2.7
RAB40BQ12829 SNORD113-1-201ENST00000365321 69 ntBASIC-1.8□□□□□ -2.7
RAB40BQ12829 RNU6-147P-201ENST00000383983 107 ntBASIC-1.8□□□□□ -2.7
RAB40BQ12829 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.8□□□□□ -2.7
RAB40BQ12829 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.8□□□□□ -2.7
RAB40BQ12829 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.8□□□□□ -2.7
RAB40BQ12829 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.8□□□□□ -2.7
RAB40BQ12829 RNU6-92P-201ENST00000605893 104 ntBASIC-1.8□□□□□ -2.7
RAB40BQ12829 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.8□□□□□ -2.7
RAB40BQ12829 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.8□□□□□ -2.7
RAB40BQ12829 SNORD113-3-201ENST00000364830 72 ntBASIC-1.81□□□□□ -2.7
RAB40BQ12829 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.81□□□□□ -2.7
RAB40BQ12829 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.81□□□□□ -2.7
RAB40BQ12829 RNU6-542P-201ENST00000516405 103 ntBASIC-1.81□□□□□ -2.7
RAB40BQ12829 MIR7110-201ENST00000612638 86 ntBASIC-1.81□□□□□ -2.7
RAB40BQ12829 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.82□□□□□ -2.7
RAB40BQ12829 SNORD60.1-201ENST00000362451 73 ntBASIC-1.82□□□□□ -2.7
RAB40BQ12829 RNY4P27-201ENST00000363341 96 ntBASIC-1.82□□□□□ -2.7
RAB40BQ12829 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.82□□□□□ -2.7
RAB40BQ12829 MIR4723-201ENST00000585070 81 ntBASIC-1.82□□□□□ -2.7
RAB40BQ12829 U4.2-201ENST00000618561 85 ntBASIC-1.82□□□□□ -2.7
RAB40BQ12829 RNU6-810P-201ENST00000364001 107 ntBASIC-1.83□□□□□ -2.7
RAB40BQ12829 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.83□□□□□ -2.7
RAB40BQ12829 RNU6-141P-201ENST00000410499 105 ntBASIC-1.83□□□□□ -2.7
RAB40BQ12829 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.83□□□□□ -2.7
RAB40BQ12829 RNU6-231P-201ENST00000517122 103 ntBASIC-1.83□□□□□ -2.7
RAB40BQ12829 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.83□□□□□ -2.7
RAB40BQ12829 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.84□□□□□ -2.7
RAB40BQ12829 AL606753.1-201ENST00000427435 87 ntBASIC-1.84□□□□□ -2.7
RAB40BQ12829 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.84□□□□□ -2.7
RAB40BQ12829 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.84□□□□□ -2.7
RAB40BQ12829 RNY4P9-201ENST00000363194 97 ntBASIC-1.85□□□□□ -2.71
RAB40BQ12829 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.85□□□□□ -2.71
RAB40BQ12829 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.85□□□□□ -2.71
RAB40BQ12829 MIR379-201ENST00000362218 67 ntBASIC-1.86□□□□□ -2.71
RAB40BQ12829 RNU6-912P-201ENST00000363800 104 ntBASIC-1.86□□□□□ -2.71
RAB40BQ12829 RNU6-895P-201ENST00000384125 103 ntBASIC-1.86□□□□□ -2.71
RAB40BQ12829 MIR496-201ENST00000385226 102 ntBASIC-1.86□□□□□ -2.71
RAB40BQ12829 RNU6-70P-201ENST00000516438 60 ntBASIC-1.86□□□□□ -2.71
RAB40BQ12829 RNU6-919P-201ENST00000516731 104 ntBASIC-1.86□□□□□ -2.71
RAB40BQ12829 IGLL4P-201ENST00000614590 133 ntBASIC-1.86□□□□□ -2.71
RAB40BQ12829 RNU6-215P-201ENST00000365169 102 ntBASIC-1.87□□□□□ -2.71
RAB40BQ12829 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.87□□□□□ -2.71
RAB40BQ12829 MIR154-201ENST00000385243 84 ntBASIC-1.87□□□□□ -2.71
RAB40BQ12829 SNORA40B-201ENST00000385573 128 ntBASIC-1.87□□□□□ -2.71
RAB40BQ12829 RNU6-530P-201ENST00000391180 107 ntBASIC-1.87□□□□□ -2.71
RAB40BQ12829 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.87□□□□□ -2.71
RAB40BQ12829 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.88□□□□□ -2.71
RAB40BQ12829 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.88□□□□□ -2.71
RAB40BQ12829 RNU6-979P-201ENST00000383896 107 ntBASIC-1.88□□□□□ -2.71
RAB40BQ12829 SNORD20-201ENST00000384550 80 ntBASIC-1.88□□□□□ -2.71
RAB40BQ12829 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.88□□□□□ -2.71
RAB40BQ12829 RNU6-687P-201ENST00000516443 89 ntBASIC-1.88□□□□□ -2.71
RAB40BQ12829 MIR5588-201ENST00000581890 63 ntBASIC-1.88□□□□□ -2.71
RAB40BQ12829 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.88□□□□□ -2.71
RAB40BQ12829 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.89□□□□□ -2.71
RAB40BQ12829 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.89□□□□□ -2.71
RAB40BQ12829 SNORD114-3-201ENST00000364969 75 ntBASIC-1.89□□□□□ -2.71
RAB40BQ12829 SNORA40.16-201ENST00000517238 121 ntBASIC-1.89□□□□□ -2.71
RAB40BQ12829 MIR4712-201ENST00000583750 82 ntBASIC-1.89□□□□□ -2.71
RAB40BQ12829 SNORD116.2-201ENST00000391251 93 ntBASIC-1.9□□□□□ -2.71
RAB40BQ12829 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.91□□□□□ -2.72
RAB40BQ12829 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.91□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 195.5 ms