Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 SNORD19-201ENST00000391191 68 ntBASIC-0.97□□□□□ -2.56
EFNA3P52797 RNU6-687P-201ENST00000516443 89 ntBASIC-0.97□□□□□ -2.56
EFNA3P52797 Y_RNA.53-201ENST00000362765 102 ntBASIC-0.98□□□□□ -2.57
EFNA3P52797 SNORD115-31-201ENST00000365318 82 ntBASIC-0.98□□□□□ -2.57
EFNA3P52797 MIR29B1-201ENST00000385015 81 ntBASIC-0.98□□□□□ -2.57
EFNA3P52797 RNA5SP86-201ENST00000390869 98 ntBASIC-0.98□□□□□ -2.57
EFNA3P52797 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.98□□□□□ -2.57
EFNA3P52797 SNORD116-16-201ENST00000384533 92 ntBASIC-0.99□□□□□ -2.57
EFNA3P52797 SNORD116-24-201ENST00000384549 92 ntBASIC-0.99□□□□□ -2.57
EFNA3P52797 RNY4P29-201ENST00000410801 97 ntBASIC-0.99□□□□□ -2.57
EFNA3P52797 Y_RNA.43-201ENST00000362670 111 ntBASIC-1□□□□□ -2.57
EFNA3P52797 RNU6-576P-201ENST00000390854 102 ntBASIC-1□□□□□ -2.57
EFNA3P52797 RNU6-542P-201ENST00000516405 103 ntBASIC-1□□□□□ -2.57
EFNA3P52797 MIR3139-201ENST00000579145 76 ntBASIC-1□□□□□ -2.57
EFNA3P52797 RNU6-598P-201ENST00000364017 105 ntBASIC-1.01□□□□□ -2.57
EFNA3P52797 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.01□□□□□ -2.57
EFNA3P52797 MIR6502-201ENST00000617296 76 ntBASIC-1.01□□□□□ -2.57
EFNA3P52797 MIR6818-201ENST00000621576 65 ntBASIC-1.01□□□□□ -2.57
EFNA3P52797 RNU6-573P-201ENST00000383938 106 ntBASIC-1.02□□□□□ -2.57
EFNA3P52797 AP002795.1-201ENST00000534879 84 ntBASIC-1.02□□□□□ -2.57
EFNA3P52797 MIR487B-201ENST00000385021 84 ntBASIC-1.03□□□□□ -2.57
EFNA3P52797 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.03□□□□□ -2.57
EFNA3P52797 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.03□□□□□ -2.57
EFNA3P52797 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.04□□□□□ -2.58
EFNA3P52797 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.04□□□□□ -2.58
EFNA3P52797 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.04□□□□□ -2.58
EFNA3P52797 SNORA41B-201ENST00000384785 128 ntBASIC-1.04□□□□□ -2.58
EFNA3P52797 MIR548AA1-201ENST00000384971 97 ntBASIC-1.04□□□□□ -2.58
EFNA3P52797 MT-TM-201ENST00000387377 68 ntBASIC-1.04□□□□□ -2.58
EFNA3P52797 RNU6-634P-201ENST00000459134 106 ntBASIC-1.04□□□□□ -2.58
EFNA3P52797 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.04□□□□□ -2.58
EFNA3P52797 MIR4756-201ENST00000577874 78 ntBASIC-1.04□□□□□ -2.58
EFNA3P52797 U2.18-201ENST00000622185 84 ntBASIC-1.04□□□□□ -2.58
EFNA3P52797 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.04□□□□□ -2.58
EFNA3P52797 RNA5SP26-201ENST00000362406 119 ntBASIC-1.05□□□□□ -2.58
EFNA3P52797 MIR1255A-201ENST00000408338 113 ntBASIC-1.05□□□□□ -2.58
EFNA3P52797 MIR1302-4-201ENST00000408701 150 ntBASIC-1.05□□□□□ -2.58
EFNA3P52797 RNU6-871P-201ENST00000516122 100 ntBASIC-1.05□□□□□ -2.58
EFNA3P52797 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.06□□□□□ -2.58
EFNA3P52797 RNU6-663P-201ENST00000391105 106 ntBASIC-1.06□□□□□ -2.58
EFNA3P52797 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.06□□□□□ -2.58
EFNA3P52797 RNU6-995P-201ENST00000391244 107 ntBASIC-1.06□□□□□ -2.58
EFNA3P52797 RNU6-630P-201ENST00000391258 106 ntBASIC-1.06□□□□□ -2.58
EFNA3P52797 RPL35AP4-201ENST00000412007 102 ntBASIC-1.06□□□□□ -2.58
EFNA3P52797 RNU6-857P-201ENST00000515893 110 ntBASIC-1.06□□□□□ -2.58
EFNA3P52797 RNU6-92P-201ENST00000605893 104 ntBASIC-1.07□□□□□ -2.58
EFNA3P52797 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-1.07□□□□□ -2.58
EFNA3P52797 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.08□□□□□ -2.58
EFNA3P52797 RNU6-279P-201ENST00000391297 101 ntBASIC-1.08□□□□□ -2.58
EFNA3P52797 AC108019.1-201ENST00000512540 175 ntBASIC-1.08□□□□□ -2.58
EFNA3P52797 SNORD1B-201ENST00000363091 84 ntBASIC-1.09□□□□□ -2.58
EFNA3P52797 MIR548H1-201ENST00000408610 102 ntBASIC-1.09□□□□□ -2.58
EFNA3P52797 RNU6-164P-201ENST00000364604 103 ntBASIC-1.1□□□□□ -2.59
EFNA3P52797 SNORD78.1-201ENST00000390866 65 ntBASIC-1.1□□□□□ -2.59
EFNA3P52797 SNORD30.1-201ENST00000391309 70 ntBASIC-1.1□□□□□ -2.59
EFNA3P52797 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.1□□□□□ -2.59
EFNA3P52797 RNU6-247P-201ENST00000362636 107 ntBASIC-1.11□□□□□ -2.59
EFNA3P52797 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.11□□□□□ -2.59
EFNA3P52797 MIR664B-201ENST00000626756 61 ntBASIC-1.11□□□□□ -2.59
EFNA3P52797 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.12□□□□□ -2.59
EFNA3P52797 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.12□□□□□ -2.59
EFNA3P52797 AC090616.4-201ENST00000448026 115 ntBASIC-1.12□□□□□ -2.59
EFNA3P52797 MIR3170-201ENST00000582699 77 ntBASIC-1.12□□□□□ -2.59
EFNA3P52797 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.12□□□□□ -2.59
EFNA3P52797 SNORA25.4-201ENST00000363666 124 ntBASIC-1.13□□□□□ -2.59
EFNA3P52797 RNU6-172P-201ENST00000411000 93 ntBASIC-1.13□□□□□ -2.59
EFNA3P52797 MIR23C-201ENST00000579846 100 ntBASIC-1.13□□□□□ -2.59
EFNA3P52797 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.13□□□□□ -2.59
EFNA3P52797 RNU6-649P-201ENST00000384463 107 ntBASIC-1.14□□□□□ -2.59
EFNA3P52797 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.14□□□□□ -2.59
EFNA3P52797 RNU6-608P-201ENST00000383927 104 ntBASIC-1.15□□□□□ -2.59
EFNA3P52797 AC018880.2-201ENST00000414265 201 ntBASIC-1.15□□□□□ -2.59
EFNA3P52797 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.15□□□□□ -2.59
EFNA3P52797 RNU7-151P-201ENST00000516930 53 ntBASIC-1.15□□□□□ -2.59
EFNA3P52797 RNA5SP405-201ENST00000363059 114 ntBASIC-1.16□□□□□ -2.6
EFNA3P52797 MIR520D-201ENST00000385002 87 ntBASIC-1.16□□□□□ -2.6
EFNA3P52797 MIR6874-201ENST00000635894 71 ntBASIC-1.16□□□□□ -2.6
EFNA3P52797 SNORD60.1-201ENST00000362451 73 ntBASIC-1.17□□□□□ -2.6
EFNA3P52797 MIR579-201ENST00000385221 98 ntBASIC-1.17□□□□□ -2.6
EFNA3P52797 RNA5SP225-201ENST00000410874 135 ntBASIC-1.17□□□□□ -2.6
EFNA3P52797 MIR4662A-201ENST00000637499 67 ntBASIC-1.17□□□□□ -2.6
EFNA3P52797 MIR4679-1-201ENST00000637619 75 ntBASIC-1.17□□□□□ -2.6
EFNA3P52797 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.18□□□□□ -2.6
EFNA3P52797 RNU6-523P-201ENST00000516304 54 ntBASIC-1.18□□□□□ -2.6
EFNA3P52797 RNU6-539P-201ENST00000516665 103 ntBASIC-1.18□□□□□ -2.6
EFNA3P52797 RNU6-1121P-201ENST00000516802 109 ntBASIC-1.18□□□□□ -2.6
EFNA3P52797 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.18□□□□□ -2.6
EFNA3P52797 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.19□□□□□ -2.6
EFNA3P52797 MIR7110-201ENST00000612638 86 ntBASIC-1.19□□□□□ -2.6
EFNA3P52797 U6.111-201ENST00000636093 83 ntBASIC-1.19□□□□□ -2.6
EFNA3P52797 SNORA25.5-201ENST00000363782 126 ntBASIC-1.2□□□□□ -2.6
EFNA3P52797 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.2□□□□□ -2.6
EFNA3P52797 Y_RNA.186-201ENST00000363899 92 ntBASIC-1.21□□□□□ -2.6
EFNA3P52797 SNORD63.2-201ENST00000516303 64 ntBASIC-1.22□□□□□ -2.6
EFNA3P52797 RNU7-160P-201ENST00000516660 62 ntBASIC-1.22□□□□□ -2.6
EFNA3P52797 AC005520.4-201ENST00000604337 90 ntBASIC-1.22□□□□□ -2.6
EFNA3P52797 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.22□□□□□ -2.6
EFNA3P52797 MIR7978-201ENST00000636158 59 ntBASIC-1.22□□□□□ -2.6
EFNA3P52797 AC103706.3-201ENST00000636297 85 ntBASIC-1.22□□□□□ -2.6
EFNA3P52797 RNU6-776P-201ENST00000364403 104 ntBASIC-1.23□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 173.2 ms